RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 FHL1Q13642 323 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 ANAPC13Q9BS18 74 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 PLXND1Q9Y4D7 1925 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 DEFB113Q30KQ7 82 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 CYYR1Q96J86 154 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 EDA2RQ9HAV5 297 aa13.64□□□□□ -0.23
COL4A2-201ENST00000360467 OCIAD2Q56VL3 154 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 SPRY2O43597 315 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 CDKN1BP46527 198 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 SLURP1P55000 103 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 HIST3H2BBQ8N257 126 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 KLF12Q9Y4X4 402 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 PLXNA4Q9HCM2 1894 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 SRSF8Q9BRL6 282 aaKnown RBP13.63□□□□□ -0.23
COL4A2-201ENST00000360467 IGHV4-38-2P0DP08 117 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 SPTA1P02549 2419 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 ZNF134P52741 427 aa13.63□□□□□ -0.23
COL4A2-201ENST00000360467 CCL24O00175 119 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 ZC2HC1BQ5TFG8 222 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 IGHV4-30-2A0A087WSY4 118 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 TSSC4Q9Y5U2 329 aaPredicted RBP13.62□□□□□ -0.23
COL4A2-201ENST00000360467 KIAA2026Q5HYC2 2103 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 SHISA9B4DS77 424 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 NDUFA4O00483 81 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 HLA-DMBP28068 263 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 TMEM243Q9BU79 118 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 PRSS29PA6NIE9 313 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 COL6A6A6NMZ7 2263 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 CHAC1Q9BUX1 264 aa13.62□□□□□ -0.23
COL4A2-201ENST00000360467 LOC105371267A0A1B0GV96 52 aa13.61□□□□□ -0.23
COL4A2-201ENST00000360467 PIP4P1Q86T03 277 aa13.61□□□□□ -0.23
COL4A2-201ENST00000360467 DKK4Q9UBT3 224 aa13.61□□□□□ -0.23
COL4A2-201ENST00000360467 CACNA1GO43497 2377 aa13.61□□□□□ -0.23
COL4A2-201ENST00000360467 C3orf79P0CE67 100 aa13.61□□□□□ -0.23
COL4A2-201ENST00000360467 ESM1Q9NQ30 184 aa13.61□□□□□ -0.23
COL4A2-201ENST00000360467 SYS1-DBNDD2H3BUS1 97 aa13.61□□□□□ -0.23
COL4A2-201ENST00000360467 A0A1B0GUS0 222 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 IGHV2-5P01817 119 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 C22orf46C9J442 243 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 TRBV19A0A075B6N1 114 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 SPINK8P0C7L1 97 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 PRSS57Q6UWY2 283 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 MTURNQ8N3F0 131 aa13.6□□□□□ -0.23
COL4A2-201ENST00000360467 IGHV7-4-1A0A0J9YVY3 117 aa13.59□□□□□ -0.23
COL4A2-201ENST00000360467 MYLKQ15746 1914 aa13.59□□□□□ -0.23
COL4A2-201ENST00000360467 YPEL3P61236 119 aaPredicted RBP13.59□□□□□ -0.23
COL4A2-201ENST00000360467 LINC01549A6NIU2 74 aa13.59□□□□□ -0.23
COL4A2-201ENST00000360467 C17orf77Q96MU5 243 aa13.59□□□□□ -0.23
COL4A2-201ENST00000360467 DEFB105AQ8NG35 78 aa13.59□□□□□ -0.23
COL4A2-201ENST00000360467 VPREB3Q9UKI3 123 aa13.59□□□□□ -0.23
COL4A2-201ENST00000360467 TRAV1-1A0A0B4J248 108 aa13.58□□□□□ -0.24
COL4A2-201ENST00000360467 IGHV4-61A0A0C4DH41 118 aa13.58□□□□□ -0.24
COL4A2-201ENST00000360467 PDE6HQ13956 83 aa13.58□□□□□ -0.24
COL4A2-201ENST00000360467 XCL1P47992 114 aa13.58□□□□□ -0.24
COL4A2-201ENST00000360467 ARTNQ5T4W7 220 aa13.58□□□□□ -0.24
COL4A2-201ENST00000360467 TSC2P49815 1807 aa13.58□□□□□ -0.24
COL4A2-201ENST00000360467 WT1-ASQ06250 92 aa13.58□□□□□ -0.24
COL4A2-201ENST00000360467 H3BRN7 92 aa13.57□□□□□ -0.24
COL4A2-201ENST00000360467 CACNA1BQ00975 2339 aa13.57□□□□□ -0.24
COL4A2-201ENST00000360467 UBE2CO00762 179 aa13.57□□□□□ -0.24
COL4A2-201ENST00000360467 KLF5Q13887 457 aaPredicted RBP13.57□□□□□ -0.24
COL4A2-201ENST00000360467 COLCA2A8K830 154 aa13.57□□□□□ -0.24
COL4A2-201ENST00000360467 GNRH2O43555 120 aa13.57□□□□□ -0.24
COL4A2-201ENST00000360467 UBE2BP63146 152 aa13.57□□□□□ -0.24
COL4A2-201ENST00000360467 SDHAF1A6NFY7 115 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 NDUFAF3Q9BU61 184 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 IGHV4-4A0A075B6R2 117 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 Q6ZS49 121 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 C9JAW5 83 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 RPL18AQ02543 176 aaKnown RBP13.56□□□□□ -0.24
COL4A2-201ENST00000360467 C2orf66Q6UXQ4 117 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 LMO1P25800 156 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 KIR3DS1Q14943 382 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 SCRT2Q9NQ03 307 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 CACNA1DQ01668 2161 aa13.56□□□□□ -0.24
COL4A2-201ENST00000360467 TRBV24-1A0A075B6N3 115 aa13.55□□□□□ -0.24
COL4A2-201ENST00000360467 IGLV1-44P01699 117 aa13.55□□□□□ -0.24
COL4A2-201ENST00000360467 MPV17L2Q567V2 206 aa13.55□□□□□ -0.24
COL4A2-201ENST00000360467 C15orf65H3BRN8 121 aa13.55□□□□□ -0.24
COL4A2-201ENST00000360467 RHODO00212 210 aa13.55□□□□□ -0.24
COL4A2-201ENST00000360467 MRPL51Q4U2R6 128 aaKnown RBP13.55□□□□□ -0.24
COL4A2-201ENST00000360467 CTSZQ9UBR2 303 aa13.55□□□□□ -0.24
COL4A2-201ENST00000360467 AKAP6Q13023 2319 aa13.55□□□□□ -0.24
COL4A2-201ENST00000360467 PRSS46E5RG02 174 aa13.55□□□□□ -0.24
COL4A2-201ENST00000360467 MRPL27Q9P0M9 148 aaKnown RBP13.55□□□□□ -0.24
COL4A2-201ENST00000360467 U3KQE9 123 aa13.54□□□□□ -0.24
COL4A2-201ENST00000360467 DOCK7Q96N67 2140 aa13.54□□□□□ -0.24
COL4A2-201ENST00000360467 IGHV3-30P01768 117 aa13.54□□□□□ -0.24
COL4A2-201ENST00000360467 IGHV3-33P01772 117 aa13.54□□□□□ -0.24
COL4A2-201ENST00000360467 IGHV3-30-3P0DP02 117 aa13.54□□□□□ -0.24
COL4A2-201ENST00000360467 IGHV3-30-5P0DP03 117 aa13.54□□□□□ -0.24
COL4A2-201ENST00000360467 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.53□□□□□ -0.24
COL4A2-201ENST00000360467 A0A1B0GW64 132 aa13.53□□□□□ -0.24
COL4A2-201ENST00000360467 IGKV2-29A2NJV5 120 aaPredicted RBP13.53□□□□□ -0.24
COL4A2-201ENST00000360467 ZC2HC1AQ96GY0 325 aa13.53□□□□□ -0.24
COL4A2-201ENST00000360467 TAL2Q16559 108 aa13.53□□□□□ -0.24
COL4A2-201ENST00000360467 RMI2Q96E14 147 aa13.53□□□□□ -0.24
COL4A2-201ENST00000360467 SIGMAR1Q99720 223 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms