RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 HOXD3P31249 432 aaPredicted RBP16.5■□□□□ 0.23
SH3RF3-201ENST00000309415 GAGE2EQ4V326 116 aa16.5■□□□□ 0.23
SH3RF3-201ENST00000309415 GAGE2DQ9UEU5 116 aa16.5■□□□□ 0.23
SH3RF3-201ENST00000309415 ANGP03950 147 aaKnown RBP16.5■□□□□ 0.23
SH3RF3-201ENST00000309415 ZSWIM8A7E2V4 1837 aa16.5■□□□□ 0.23
SH3RF3-201ENST00000309415 CACNA1DQ01668 2161 aa16.5■□□□□ 0.23
SH3RF3-201ENST00000309415 PLXNA3P51805 1871 aa16.5■□□□□ 0.23
SH3RF3-201ENST00000309415 SYS1-DBNDD2H3BUS1 97 aa16.5■□□□□ 0.23
SH3RF3-201ENST00000309415 K7EM74 188 aa16.49■□□□□ 0.23
SH3RF3-201ENST00000309415 IGHV2-70P01814 119 aa16.49■□□□□ 0.23
SH3RF3-201ENST00000309415 C22orf46C9J442 243 aa16.49■□□□□ 0.23
SH3RF3-201ENST00000309415 KLF5Q13887 457 aaPredicted RBP16.49■□□□□ 0.23
SH3RF3-201ENST00000309415 DIAPH2-AS1Q14236 149 aa16.49■□□□□ 0.23
SH3RF3-201ENST00000309415 HIST3H2BBQ8N257 126 aa16.49■□□□□ 0.23
SH3RF3-201ENST00000309415 ANK1P16157 1881 aa16.48■□□□□ 0.23
SH3RF3-201ENST00000309415 ZNF134P52741 427 aa16.48■□□□□ 0.23
SH3RF3-201ENST00000309415 ATP6V0BQ99437 205 aa16.48■□□□□ 0.23
SH3RF3-201ENST00000309415 C15orf65H3BRN8 121 aa16.48■□□□□ 0.23
SH3RF3-201ENST00000309415 C2orf66Q6UXQ4 117 aa16.48■□□□□ 0.23
SH3RF3-201ENST00000309415 SDHAF1A6NFY7 115 aa16.48■□□□□ 0.23
SH3RF3-201ENST00000309415 NEGR1Q7Z3B1 354 aa16.48■□□□□ 0.23
SH3RF3-201ENST00000309415 MMP23AO75900 390 aa16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 LYL1P12980 280 aa16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 HLA-DRB4P13762 266 aa16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 ZNF48Q96MX3 618 aaPredicted RBP16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 HLA-DRB4X5D2U9 266 aa16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 FOXI2Q6ZQN5 318 aa16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 TMEM14CQ9P0S9 112 aa16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 NCOR1O75376 2440 aa16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 A0A0J9YY99 117 aa16.47■□□□□ 0.23
SH3RF3-201ENST00000309415 IGKV2D-24A0A075B6R9 120 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 PRSS29PA6NIE9 313 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 Q8N8P6 123 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 WT1-ASQ06250 92 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 HEATR1Q9H583 2144 aaKnown RBP16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 MGAMO43451 1857 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 A0A1B0GUS0 222 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 NXPH4O95158 308 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 UBE2CO00762 179 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 KIAA1671Q9BY89 1806 aa16.46■□□□□ 0.23
SH3RF3-201ENST00000309415 IGHV4-30-2A0A087WSY4 118 aa16.46■□□□□ 0.22
SH3RF3-201ENST00000309415 IGHV4-61A0A0C4DH41 118 aa16.46■□□□□ 0.22
SH3RF3-201ENST00000309415 WT1P19544 449 aaPredicted RBP16.46■□□□□ 0.22
SH3RF3-201ENST00000309415 PRR25Q96S07 402 aa16.46■□□□□ 0.22
SH3RF3-201ENST00000309415 IGKV1OR2-108A0A075B7D4 117 aa16.45■□□□□ 0.22
SH3RF3-201ENST00000309415 DKK4Q9UBT3 224 aa16.45■□□□□ 0.22
SH3RF3-201ENST00000309415 C3orf79P0CE67 100 aa16.45■□□□□ 0.22
SH3RF3-201ENST00000309415 TMEM256Q8N2U0 113 aa16.45■□□□□ 0.22
SH3RF3-201ENST00000309415 NOP10Q9NPE3 64 aaKnown RBP16.45■□□□□ 0.22
SH3RF3-201ENST00000309415 IGKV1-39P01597 117 aa16.45■□□□□ 0.22
SH3RF3-201ENST00000309415 IGKV1D-39P04432 117 aa16.45■□□□□ 0.22
SH3RF3-201ENST00000309415 NAA38Q9BRA0 125 aaKnown RBP16.45■□□□□ 0.22
SH3RF3-201ENST00000309415 FAM104BQ5XKR9 115 aa16.44■□□□□ 0.22
SH3RF3-201ENST00000309415 GBF1Q92538 1859 aa16.44■□□□□ 0.22
SH3RF3-201ENST00000309415 FAM231BA6NCW3 169 aa16.44■□□□□ 0.22
SH3RF3-201ENST00000309415 RHOHQ15669 191 aa16.44■□□□□ 0.22
SH3RF3-201ENST00000309415 DEFB136Q30KP8 78 aa16.44■□□□□ 0.22
SH3RF3-201ENST00000309415 IGF2-ASQ6U949 168 aa16.44■□□□□ 0.22
SH3RF3-201ENST00000309415 IGHV1-24A0A0C4DH33 117 aa16.44■□□□□ 0.22
SH3RF3-201ENST00000309415 ANAPC13Q9BS18 74 aa16.44■□□□□ 0.22
SH3RF3-201ENST00000309415 TRAV26-2A0A0B4J265 109 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 RBMY1FQ15415 496 aaKnown RBP16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 CLPSL2Q6UWE3 100 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 EDA2RQ9HAV5 297 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 FER1L5A0AVI2 2057 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 MED12Q93074 2177 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 A0A087X0K7 114 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 UBE2BP63146 152 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 GAGE2AQ6NT46 116 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 CT83Q5H943 113 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 COLCA2A8K830 154 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 GP9P14770 177 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 FOXE3Q13461 319 aa16.43■□□□□ 0.22
SH3RF3-201ENST00000309415 SIP14410 1827 aa16.42■□□□□ 0.22
SH3RF3-201ENST00000309415 SUMO4Q6EEV6 95 aa16.42■□□□□ 0.22
SH3RF3-201ENST00000309415 MRPL53Q96EL3 112 aaKnown RBP16.41■□□□□ 0.22
SH3RF3-201ENST00000309415 LRRK1Q38SD2 2015 aa16.41■□□□□ 0.22
SH3RF3-201ENST00000309415 ABCA4P78363 2273 aa16.41■□□□□ 0.22
SH3RF3-201ENST00000309415 IGHV4-38-2P0DP08 117 aa16.41■□□□□ 0.22
SH3RF3-201ENST00000309415 CFPP27918 469 aa16.41■□□□□ 0.22
SH3RF3-201ENST00000309415 PIFOQ8TCI5 191 aa16.41■□□□□ 0.22
SH3RF3-201ENST00000309415 TEX48A0A1B0GUV7 120 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 SRSF2Q01130 221 aaKnown RBP16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 IGFL2Q6UWQ7 119 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 CTSZQ9UBR2 303 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 H3BMM0 161 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 PCP4P48539 62 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 IGLV2-23P01705 113 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 IGLC1P0CG04 106 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 Q9HAA7 133 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 PKIGQ9Y2B9 76 aa16.4■□□□□ 0.22
SH3RF3-201ENST00000309415 C8orf31Q8N9H6 132 aa16.39■□□□□ 0.22
SH3RF3-201ENST00000309415 DIDO1Q9BTC0 2240 aaKnown RBP16.39■□□□□ 0.21
SH3RF3-201ENST00000309415 POLEQ07864 2286 aa16.39■□□□□ 0.21
SH3RF3-201ENST00000309415 SLURP1P55000 103 aa16.39■□□□□ 0.21
SH3RF3-201ENST00000309415 TAL2Q16559 108 aa16.39■□□□□ 0.21
SH3RF3-201ENST00000309415 PI4KAP42356 2102 aa16.39■□□□□ 0.21
SH3RF3-201ENST00000309415 VOPP1Q96AW1 172 aa16.39■□□□□ 0.21
SH3RF3-201ENST00000309415 SIGMAR1Q99720 223 aa16.39■□□□□ 0.21
SH3RF3-201ENST00000309415 RIF1Q5UIP0 2472 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms