RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 ERBINQ96RT1 1412 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 MUC4Q99102 2169 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 A0A087WSZ3 146 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 TRAV27A0A087WT01 109 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 GPR31O00270 319 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 SERPINA1P01009 418 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 SPINK6Q6UWN8 80 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 TMEM14EPQ6UXP3 125 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 PXT1Q8NFP0 134 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 TEX37Q96LM6 180 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 HYLS1Q96M11 299 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 CCDC94Q9BW85 323 aaPredicted RBP0.07□□□□□ -2.4
AP3S1-209ENST00000640413 PARVGQ9HBI0 331 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 BOKQ9UMX3 212 aaPredicted RBP0.07□□□□□ -2.4
AP3S1-209ENST00000640413 SLC22A13Q9Y226 551 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 OTOGQ6ZRI0 2925 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 CEP164Q9UPV0 1460 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 PIEZO2Q9H5I5 2752 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 MXRA5Q9NR99 2828 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 TET1Q8NFU7 2136 aa0.07□□□□□ -2.4
AP3S1-209ENST00000640413 FAM186AA6NE01 2351 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 NUP98P52948 1817 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 MYO5AQ9Y4I1 1855 aaKnown RBP0.06□□□□□ -2.4
AP3S1-209ENST00000640413 COL7A1Q02388 2944 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 hDV103S1A0JD37 113 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 C9orf170A2RU37 121 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 CCL4P13236 92 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 NFYBP25208 207 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 KLRD1Q13241 179 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 RGS21Q2M5E4 152 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 OCIAD2Q56VL3 154 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 MAP1LC3BQ9GZQ8 125 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 POPDC3Q9HBV1 291 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 ARL2BPQ9Y2Y0 163 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 TEX15Q9BXT5 2789 aa0.06□□□□□ -2.4
AP3S1-209ENST00000640413 TPRP12270 2363 aaKnown RBP0.05□□□□□ -2.4
AP3S1-209ENST00000640413 MIA2Q96PC5 1412 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 CEP250Q9BV73 2442 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 COL24A1Q17RW2 1714 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 BCORL1Q5H9F3 1711 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 TNCP24821 2201 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 ITPR2Q14571 2701 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 IGLV1-51P01701 117 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 IFNA4P05014 189 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 CRHP06850 196 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 FXYD4P59646 89 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 RPL37AP61513 92 aaKnown RBP0.05□□□□□ -2.4
AP3S1-209ENST00000640413 CCL7P80098 99 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 EIF3IQ13347 325 aaKnown RBP0.05□□□□□ -2.4
AP3S1-209ENST00000640413 PATE2Q6UY27 113 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 PPTC7Q8NI37 304 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 ZHX1-C8orf76Q96EF9 292 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 PHB2Q99623 299 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 CCL19Q99731 98 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 C9orf16Q9BUW7 83 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 CNOT1A5YKK6 2376 aaKnown RBP0.05□□□□□ -2.4
AP3S1-209ENST00000640413 KMT2AQ03164 3969 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 SPTAN1Q13813 2472 aaKnown RBP0.05□□□□□ -2.4
AP3S1-209ENST00000640413 RFX7Q2KHR2 1363 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 STARD9Q9P2P6 4700 aa0.05□□□□□ -2.4
AP3S1-209ENST00000640413 NCAPD3P42695 1498 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 BPTFQ12830 3046 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 SRRM2Q9UQ35 2752 aaKnown RBP0.04□□□□□ -2.4
AP3S1-209ENST00000640413 WDFY4Q6ZS81 3184 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 LYRM1O43325 122 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 NDUFC2O95298 119 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 CD3DP04234 171 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 TMBIM6P55061 237 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 NCALDP61601 193 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 LINC00299Q6ZSB3 139 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 NABP2Q9BQ15 211 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 LIMD2Q9BT23 127 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 OR2J1Q9GZK6 312 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 CACYBPQ9HB71 228 aaKnown RBP0.04□□□□□ -2.4
AP3S1-209ENST00000640413 MYCBP2O75592 4640 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 SPTA1P02549 2419 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 ZGRF1Q86YA3 2104 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 LOC285556D6RIA3 1793 aa0.04□□□□□ -2.4
AP3S1-209ENST00000640413 PRRC2CQ9Y520 2896 aaKnown RBP0.04□□□□□ -2.4
AP3S1-209ENST00000640413 SYNE1Q8NF91 8797 aaKnown RBP0.03□□□□□ -2.4
AP3S1-209ENST00000640413 MYO7AQ13402 2215 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 TNRC18O15417 2968 aaPredicted RBP0.03□□□□□ -2.4
AP3S1-209ENST00000640413 PCNX1Q96RV3 2341 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 WNK1Q9H4A3 2382 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 MAP1AP78559 2803 aaPredicted RBP0.03□□□□□ -2.4
AP3S1-209ENST00000640413 TNXBP22105 4242 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 NBPF19A0A087WUL8 3843 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 DUXBA0A1W2PPF3 345 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 G3V2T6 193 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 K7ERJ3 54 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 RER1O15258 196 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 IFNA14P01570 189 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 CXCL1P09341 107 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 ARPP19P56211 112 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 PLAC4Q8WY50 150 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 FAT1Q14517 4588 aa0.03□□□□□ -2.4
AP3S1-209ENST00000640413 DNAH7Q8WXX0 4024 aa0.03□□□□□ -2.41
AP3S1-209ENST00000640413 PCF11O94913 1555 aaKnown RBP0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms