RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 A6NJY4 79 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 MGPP08493 103 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 C3orf36Q3SXR2 165 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 Q6AWC8 147 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 TMEM75Q8N9X5 138 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 PTH2Q96A98 100 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 RAXQ9Y2V3 346 aa12.5□□□□□ -0.41
SYNRG-223ENST00000616179 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 SH2D1AO60880 128 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 DDB2Q92466 427 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 MRPL35Q9NZE8 188 aaKnown RBP12.49□□□□□ -0.41
SYNRG-223ENST00000616179 IGHV3-66A0A0C4DH42 116 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 PRR33A8MZF0 331 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 VSTM5A8MXK1 200 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 SNCGO76070 127 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 SCGB1A1P11684 91 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 LYRM7Q5U5X0 104 aa12.49□□□□□ -0.41
SYNRG-223ENST00000616179 SPTAN1Q13813 2472 aaKnown RBP12.49□□□□□ -0.41
SYNRG-223ENST00000616179 IGHV1-18A0A0C4DH31 117 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 C9orf172C9J069 976 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 ZFAND6Q6FIF0 208 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 IGHV3-49A0A0A0MS15 119 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 TRBV20-1A0A075B6N2 111 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 LY6G6EA0A0G2JKS1 128 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 RPL11P62913 178 aaKnown RBP12.48□□□□□ -0.41
SYNRG-223ENST00000616179 MSRB1Q9NZV6 116 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 U3KQA8 63 aa12.48□□□□□ -0.41
SYNRG-223ENST00000616179 DOPEY2Q9Y3R5 2298 aa12.47□□□□□ -0.41
SYNRG-223ENST00000616179 SIVA1O15304 175 aa12.47□□□□□ -0.41
SYNRG-223ENST00000616179 APOBEC3AP31941 199 aaPredicted RBP12.47□□□□□ -0.41
SYNRG-223ENST00000616179 EMP1P54849 157 aa12.47□□□□□ -0.41
SYNRG-223ENST00000616179 C9orf106Q8NAJ2 232 aa12.47□□□□□ -0.41
SYNRG-223ENST00000616179 SPANXB1Q9NS25 103 aaPredicted RBP12.47□□□□□ -0.41
SYNRG-223ENST00000616179 ATP5LO75964 103 aa12.47□□□□□ -0.41
SYNRG-223ENST00000616179 TET2Q6N021 2002 aaPredicted RBP12.47□□□□□ -0.41
SYNRG-223ENST00000616179 ZNF815PA8K554 130 aa12.47□□□□□ -0.41
SYNRG-223ENST00000616179 SCGB3A1Q96QR1 104 aa12.47□□□□□ -0.41
SYNRG-223ENST00000616179 C19orf71A6NCJ1 209 aa12.46□□□□□ -0.41
SYNRG-223ENST00000616179 CNTFRP26992 372 aa12.46□□□□□ -0.41
SYNRG-223ENST00000616179 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.41
SYNRG-223ENST00000616179 RNF183Q96D59 192 aa12.46□□□□□ -0.41
SYNRG-223ENST00000616179 PRSS22Q9GZN4 317 aa12.46□□□□□ -0.41
SYNRG-223ENST00000616179 MT-ATP8P03928 68 aa12.46□□□□□ -0.42
SYNRG-223ENST00000616179 EFNA4P52798 201 aa12.46□□□□□ -0.42
SYNRG-223ENST00000616179 IGKV3-7A0A075B6H7 116 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 ONECUT1Q9UBC0 465 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 TNFRSF6BO95407 300 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 TMEM167AQ8TBQ9 72 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 TRAV26-2A0A0B4J265 109 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 ABHD17AQ96GS6 310 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 TRGV9Q99603 122 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
SYNRG-223ENST00000616179 PRSS29PA6NIE9 313 aa12.44□□□□□ -0.42
SYNRG-223ENST00000616179 FGF6P10767 208 aa12.44□□□□□ -0.42
SYNRG-223ENST00000616179 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
SYNRG-223ENST00000616179 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
SYNRG-223ENST00000616179 NXT2Q9NPJ8 142 aaKnown RBP12.44□□□□□ -0.42
SYNRG-223ENST00000616179 A8MWV9 139 aa12.44□□□□□ -0.42
SYNRG-223ENST00000616179 F5H697 171 aa12.44□□□□□ -0.42
SYNRG-223ENST00000616179 M0R381 172 aa12.44□□□□□ -0.42
SYNRG-223ENST00000616179 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
SYNRG-223ENST00000616179 AGRNO00468 2067 aa12.43□□□□□ -0.42
SYNRG-223ENST00000616179 ACACAQ13085 2346 aa12.43□□□□□ -0.42
SYNRG-223ENST00000616179 KLF12Q9Y4X4 402 aa12.43□□□□□ -0.42
SYNRG-223ENST00000616179 SMIM20Q8N5G0 67 aa12.43□□□□□ -0.42
SYNRG-223ENST00000616179 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 DPF1Q92782 380 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 TMEM170BQ5T4T1 132 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 RAX2Q96IS3 184 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 IGKV1D-37A0A075B6S9 117 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 GP9P14770 177 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 RITA1Q96K30 269 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 LINC00312Q9Y6C7 94 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 GAFA1Q96PS6 74 aa12.42□□□□□ -0.42
SYNRG-223ENST00000616179 PLSCR4Q9NRQ2 329 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 LRP4O75096 1905 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 PRSS2P07478 247 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 PPP1R27Q86WC6 154 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 UBALD2Q8IYN6 164 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 SVIPQ8NHG7 77 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 LTBP2Q14767 1821 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 EXPH5Q8NEV8 1989 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 IGHV4-39P01824 125 aa12.41□□□□□ -0.42
SYNRG-223ENST00000616179 TRBV19A0A075B6N1 114 aa12.4□□□□□ -0.42
SYNRG-223ENST00000616179 GLRXP35754 106 aa12.4□□□□□ -0.42
SYNRG-223ENST00000616179 FOXI1Q12951 378 aa12.4□□□□□ -0.42
SYNRG-223ENST00000616179 POU2AF1Q16633 256 aa12.4□□□□□ -0.42
SYNRG-223ENST00000616179 TMEM200BQ69YZ2 307 aa12.4□□□□□ -0.42
SYNRG-223ENST00000616179 IGKV3-15P01624 115 aa12.4□□□□□ -0.42
SYNRG-223ENST00000616179 TM4SF5O14894 197 aa12.4□□□□□ -0.42
SYNRG-223ENST00000616179 C3orf56Q8N813 242 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms