RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CLPSL1A2RUU4 121 aa9.24□□□□□ -0.93
USP6NL-206ENST00000609853 GPX1P07203 203 aa9.24□□□□□ -0.93
USP6NL-206ENST00000609853 RIGQ13278 110 aa9.24□□□□□ -0.93
USP6NL-206ENST00000609853 C9orf152Q5JTZ5 239 aa9.24□□□□□ -0.93
USP6NL-206ENST00000609853 GDF5OSQ5U4N7 250 aa9.24□□□□□ -0.93
USP6NL-206ENST00000609853 CYB5R2Q6BCY4 276 aa9.24□□□□□ -0.93
USP6NL-206ENST00000609853 NOL4LQ96MY1 436 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-206ENST00000609853 GCN1Q92616 2671 aaKnown RBP9.24□□□□□ -0.93
USP6NL-206ENST00000609853 A0A1B0GUT8 65 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 PRB1P04280 392 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 PPIFP30405 207 aaKnown RBP9.23□□□□□ -0.93
USP6NL-206ENST00000609853 BMI1P35226 326 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 RPS20P60866 119 aaKnown RBP9.23□□□□□ -0.93
USP6NL-206ENST00000609853 CTAG1AP78358 180 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 SRSF2Q01130 221 aaKnown RBP9.23□□□□□ -0.93
USP6NL-206ENST00000609853 FAM209BQ5JX69 171 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 LCN12Q6JVE5 192 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 GATD1Q8NB37 220 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 C18orf32Q8TCD1 76 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 PRR25Q96S07 402 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 ALKBH7Q9BT30 221 aaPredicted RBP9.23□□□□□ -0.93
USP6NL-206ENST00000609853 NDFIP1Q9BT67 221 aa9.23□□□□□ -0.93
USP6NL-206ENST00000609853 UBR5O95071 2799 aaPredicted RBP9.23□□□□□ -0.93
USP6NL-206ENST00000609853 A0A0G2JLM5 398 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 NDUFA4O00483 81 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 SCGB1D1O95968 90 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 BORCS7Q96B45 105 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 NAGKQ9UJ70 344 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 ZNF462Q96JM2 2506 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 A0A096LNT2 108 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.22□□□□□ -0.93
USP6NL-206ENST00000609853 IGHV3-35A0A0C4DH35 117 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 A0A1W2PS18 150 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 ZNF324O75467 553 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-206ENST00000609853 IGHG4P01861 327 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 APOHP02749 345 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-206ENST00000609853 ARL3P36405 182 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 CRIP1P50238 77 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 LOXL1Q08397 574 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-206ENST00000609853 LY6EQ16553 131 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.22□□□□□ -0.93
USP6NL-206ENST00000609853 BEX4Q9NWD9 120 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-206ENST00000609853 IGKV2-40A0A087WW87 121 aaPredicted RBP9.21□□□□□ -0.94
USP6NL-206ENST00000609853 TMEM189A5PLL7 270 aa9.21□□□□□ -0.94
USP6NL-206ENST00000609853 F2Z2F3 143 aa9.21□□□□□ -0.94
USP6NL-206ENST00000609853 IGKV2D-40P01614 121 aaPredicted RBP9.21□□□□□ -0.94
USP6NL-206ENST00000609853 AMTP48728 403 aa9.21□□□□□ -0.94
USP6NL-206ENST00000609853 Q6ZWC4 215 aa9.21□□□□□ -0.94
USP6NL-206ENST00000609853 LRRC75A-AS1Q8N1F1 130 aa9.21□□□□□ -0.94
USP6NL-206ENST00000609853 AVPP01185 164 aa9.2□□□□□ -0.94
USP6NL-206ENST00000609853 IGLV1-40P01703 118 aa9.2□□□□□ -0.94
USP6NL-206ENST00000609853 C8orf49Q96NF6 230 aa9.2□□□□□ -0.94
USP6NL-206ENST00000609853 RCHY1Q96PM5 261 aa9.2□□□□□ -0.94
USP6NL-206ENST00000609853 SSBP4Q9BWG4 385 aaPredicted RBP9.2□□□□□ -0.94
USP6NL-206ENST00000609853 ANKRD17O75179 2603 aaKnown RBP9.2□□□□□ -0.94
USP6NL-206ENST00000609853 IGHV3OR16-8A0A075B7F1 116 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 LOC102724200A0A096LPH7 203 aaPredicted RBP9.19□□□□□ -0.94
USP6NL-206ENST00000609853 TMEM89A2RUT3 159 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 SH2D1AO60880 128 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 RAB4AP20338 218 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 DDTP30046 118 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 SRSF1Q07955 248 aaKnown RBP eCLIP9.19□□□□□ -0.94
USP6NL-206ENST00000609853 NRGNQ92686 78 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 PPP1R14DQ9NXH3 145 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 LINC00527Q9UJ94 153 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 HSBP1O75506 76 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 DEFA6Q01524 100 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 ZNF493Q6ZR52 646 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 CHCHD1Q96BP2 118 aaKnown RBP9.19□□□□□ -0.94
USP6NL-206ENST00000609853 VGLL1Q99990 258 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 NRN1Q9NPD7 142 aa9.19□□□□□ -0.94
USP6NL-206ENST00000609853 HELZ2Q9BYK8 2649 aaKnown RBP9.19□□□□□ -0.94
USP6NL-206ENST00000609853 CRYBG3Q68DQ2 2970 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 LRRK2Q5S007 2527 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 FABP5P3A8MUU1 101 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 PF4V1P10720 104 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 BLCAPP62952 87 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 CFHR3Q02985 330 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 C8orf86Q6ZUL3 223 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 C9orf139Q6ZV77 190 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 GLMPQ8WWB7 406 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 ASCL2Q99929 193 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 CELSR2Q9HCU4 2923 aa9.18□□□□□ -0.94
USP6NL-206ENST00000609853 ZNF705FA8MVS1 300 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-206ENST00000609853 TGFAP01135 160 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 ARMS2P0C7Q2 107 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 ZNF705DP0CH99 300 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-206ENST00000609853 ZNF705BP0CI00 300 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-206ENST00000609853 PMCHP20382 165 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 TEX43Q6ZNM6 134 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 Q71RC1 249 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-206ENST00000609853 LENEPQ9Y5L5 61 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 HLA-DMBP28068 263 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 TMEM78Q5T7P6 136 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 C9orf47Q6ZRZ4 202 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 NIT1Q86X76 327 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 OR4X2Q8NGF9 303 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 NPFFR1Q9GZQ6 430 aa9.17□□□□□ -0.94
USP6NL-206ENST00000609853 PRO1933Q9H354 126 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms