RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 MUC2Q02817 5179 aa-0.33□□□□□ -2.46
ATM-211ENST00000527389 AKAP11Q9UKA4 1901 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 FAM159BA6NKW6 160 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 TMEM114B3SHH9 223 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 CST8O60676 142 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 OCIAD2Q56VL3 154 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 S100A7AQ86SG5 101 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 MIA2Q96PC5 1412 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 PARVGQ9HBI0 331 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 PRKDCP78527 4128 aaKnown RBP-0.34□□□□□ -2.46
ATM-211ENST00000527389 HECTD4Q9Y4D8 3996 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 LPAP08519 4548 aa-0.34□□□□□ -2.46
ATM-211ENST00000527389 HELZP42694 1942 aaKnown RBP-0.34□□□□□ -2.46
ATM-211ENST00000527389 ITGB3BPQ13352 177 aaPredicted RBP-0.35□□□□□ -2.47
ATM-211ENST00000527389 KRTAP6-1Q3LI64 71 aa-0.35□□□□□ -2.47
ATM-211ENST00000527389 LIN52Q52LA3 116 aa-0.35□□□□□ -2.47
ATM-211ENST00000527389 PRR15Q8IV56 129 aa-0.35□□□□□ -2.47
ATM-211ENST00000527389 CCL19Q99731 98 aa-0.35□□□□□ -2.47
ATM-211ENST00000527389 ALMS1Q8TCU4 4167 aa-0.35□□□□□ -2.47
ATM-211ENST00000527389 NUP210Q8TEM1 1887 aaPredicted RBP-0.35□□□□□ -2.47
ATM-211ENST00000527389 PLXNA1Q9UIW2 1896 aa-0.35□□□□□ -2.47
ATM-211ENST00000527389 MUC12Q9UKN1 5478 aa-0.35□□□□□ -2.47
ATM-211ENST00000527389 WNK1Q9H4A3 2382 aa-0.36□□□□□ -2.47
ATM-211ENST00000527389 IGHV3-33P01772 117 aa-0.36□□□□□ -2.47
ATM-211ENST00000527389 CYBAP13498 195 aa-0.36□□□□□ -2.47
ATM-211ENST00000527389 Q86TA4 180 aa-0.36□□□□□ -2.47
ATM-211ENST00000527389 OR10X1Q8NGY0 326 aa-0.36□□□□□ -2.47
ATM-211ENST00000527389 POPDC3Q9HBV1 291 aa-0.36□□□□□ -2.47
ATM-211ENST00000527389 KDM6BO15054 1643 aa-0.36□□□□□ -2.47
ATM-211ENST00000527389 DSTQ03001 7570 aaKnown RBP-0.36□□□□□ -2.47
ATM-211ENST00000527389 AKAP6Q13023 2319 aa-0.36□□□□□ -2.47
ATM-211ENST00000527389 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.36□□□□□ -2.47
ATM-211ENST00000527389 CDKN2CP42773 168 aa-0.37□□□□□ -2.47
ATM-211ENST00000527389 PPTC7Q8NI37 304 aa-0.37□□□□□ -2.47
ATM-211ENST00000527389 RMND5BQ96G75 393 aaPredicted RBP-0.37□□□□□ -2.47
ATM-211ENST00000527389 VIRMAQ69YN4 1812 aaKnown RBP-0.37□□□□□ -2.47
ATM-211ENST00000527389 SPTBN1Q01082 2364 aaKnown RBP-0.37□□□□□ -2.47
ATM-211ENST00000527389 CEP164Q9UPV0 1460 aa-0.37□□□□□ -2.47
ATM-211ENST00000527389 PLXNA2O75051 1894 aa-0.37□□□□□ -2.47
ATM-211ENST00000527389 SETXQ7Z333 2677 aaKnown RBP-0.38□□□□□ -2.47
ATM-211ENST00000527389 ATRQ13535 2644 aa-0.38□□□□□ -2.47
ATM-211ENST00000527389 CRHP06850 196 aa-0.38□□□□□ -2.47
ATM-211ENST00000527389 SPA17Q15506 151 aa-0.38□□□□□ -2.47
ATM-211ENST00000527389 OR4K15Q8NH41 348 aa-0.38□□□□□ -2.47
ATM-211ENST00000527389 C2CD3Q4AC94 2353 aa-0.38□□□□□ -2.47
ATM-211ENST00000527389 PDZD2O15018 2839 aa-0.38□□□□□ -2.47
ATM-211ENST00000527389 CSPG4Q6UVK1 2322 aa-0.38□□□□□ -2.47
ATM-211ENST00000527389 TNS1Q9HBL0 1735 aaKnown RBP-0.38□□□□□ -2.47
ATM-211ENST00000527389 TGP01266 2768 aa-0.39□□□□□ -2.47
ATM-211ENST00000527389 NF1P21359 2839 aa-0.39□□□□□ -2.47
ATM-211ENST00000527389 HMGB3O15347 200 aaKnown RBP-0.39□□□□□ -2.47
ATM-211ENST00000527389 LY6G6CO95867 125 aa-0.39□□□□□ -2.47
ATM-211ENST00000527389 LINC00299Q6ZSB3 139 aa-0.39□□□□□ -2.47
ATM-211ENST00000527389 LRRC18Q8N456 261 aa-0.39□□□□□ -2.47
ATM-211ENST00000527389 PPP1R14BQ96C90 147 aa-0.39□□□□□ -2.47
ATM-211ENST00000527389 BOKQ9UMX3 212 aaPredicted RBP-0.39□□□□□ -2.47
ATM-211ENST00000527389 NBEAL1Q6ZS30 2694 aa-0.39□□□□□ -2.47
ATM-211ENST00000527389 ARFGEF1Q9Y6D6 1849 aa-0.39□□□□□ -2.47
ATM-211ENST00000527389 DLEC1Q9Y238 1755 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 USP54Q70EL1 1684 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 MYO7BQ6PIF6 2116 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 SPTBN2O15020 2390 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 COL6A3P12111 3177 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 PKDREJQ9NTG1 2253 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 GVINP1Q7Z2Y8 2422 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 hDV103S1A0JD37 113 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 C9orf170A2RU37 121 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 C1QBP02746 253 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 NFYBP25208 207 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 CACYBPQ9HB71 228 aaKnown RBP-0.4□□□□□ -2.47
ATM-211ENST00000527389 ENY2Q9NPA8 101 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 FAM32AQ9Y421 112 aaKnown RBP-0.4□□□□□ -2.47
ATM-211ENST00000527389 FER1L6Q2WGJ9 1857 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 LRP1BQ9NZR2 4599 aa-0.4□□□□□ -2.47
ATM-211ENST00000527389 PTPN13Q12923 2485 aa-0.41□□□□□ -2.47
ATM-211ENST00000527389 A0A0J9YY99 117 aa-0.41□□□□□ -2.48
ATM-211ENST00000527389 CST2P09228 141 aa-0.41□□□□□ -2.48
ATM-211ENST00000527389 ERVS71-1P61550 626 aa-0.41□□□□□ -2.48
ATM-211ENST00000527389 HSPE1P61604 102 aaKnown RBP-0.41□□□□□ -2.48
ATM-211ENST00000527389 TAF1AQ15573 450 aaPredicted RBP-0.41□□□□□ -2.48
ATM-211ENST00000527389 LYG2Q86SG7 212 aa-0.41□□□□□ -2.48
ATM-211ENST00000527389 LIMD2Q9BT23 127 aa-0.41□□□□□ -2.48
ATM-211ENST00000527389 RREB1Q92766 1687 aa-0.41□□□□□ -2.48
ATM-211ENST00000527389 APC2O95996 2303 aa-0.41□□□□□ -2.48
ATM-211ENST00000527389 FRMPD1Q5SYB0 1578 aa-0.41□□□□□ -2.48
ATM-211ENST00000527389 TRPM1Q7Z4N2 1603 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 STAB2Q8WWQ8 2551 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 KIAA0100Q14667 2235 aaKnown RBP-0.42□□□□□ -2.48
ATM-211ENST00000527389 PARP14Q460N5 1801 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 A6NN06 94 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 PDE6GP18545 87 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 KLRD1Q13241 179 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 PXT1Q8NFP0 134 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 ZHX1-C8orf76Q96EF9 292 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 ZNF714Q96N38 554 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 MYH13Q9UKX3 1938 aa-0.42□□□□□ -2.48
ATM-211ENST00000527389 PLXNB2O15031 1838 aa-0.43□□□□□ -2.48
ATM-211ENST00000527389 KIF13AQ9H1H9 1805 aa-0.43□□□□□ -2.48
ATM-211ENST00000527389 MIR22HGQ0VDD5 57 aa-0.43□□□□□ -2.48
ATM-211ENST00000527389 C10orf99Q6UWK7 81 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 354.8 ms