RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 OR9Q1Q8NGQ5 310 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 TXNDC17Q9BRA2 123 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 LINC00467Q9BRT7 94 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 TTTY12Q9BZ98 90 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 LRTM1Q9HBL6 345 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 AKAP11Q9UKA4 1901 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 MON2Q7Z3U7 1717 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 SCN9AQ15858 1988 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 BCORQ6W2J9 1755 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 ZNF609O15014 1411 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 EDC4Q6P2E9 1401 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 MRC1P22897 1456 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 TRAV5A0A0B4J249 113 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 IBA57-AS1B1ANH7 110 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 SHBGP04278 402 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 CTSDP07339 412 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 SCGB1A1P11684 91 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 INSL3P51460 131 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 HES1Q14469 280 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 TMEM155Q4W5P6 130 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 BRMS1LQ5PSV4 323 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 EIF5AL1Q6IS14 154 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 PDZD9Q8IXQ8 264 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 THEM6Q8WUY1 208 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 NPCDR1Q9BY65 106 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 PRO3102Q9H379 93 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 POPDC3Q9HBV1 291 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 MAP2P11137 1827 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 CACNA1GO43497 2377 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 A0A0C4DFX4 3053 aa1.87□□□□□ -2.11
TRAPPC13-208ENST00000505553 COL4A2P08572 1712 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 COL5A3P25940 1745 aaPredicted RBP1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 LAMB4A4D0S4 1761 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 RBBP6Q7Z6E9 1792 aaKnown RBP1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 PKD1L2Q7Z442 2459 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 SZT2Q5T011 3432 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 LOC105371267A0A1B0GV96 52 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 ARL5CA6NH57 179 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 C1QCP02747 245 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 BAALC-AS2P0C853 105 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 HLA-EP13747 358 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 FKBP2P26885 142 aaKnown RBP1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 DYNLT1P63172 113 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 RHOGP84095 191 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 ELOBQ15370 118 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 TPRXLQ17RH7 258 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 C7orf65Q6ZTY9 151 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 TMEM35BQ8NCS4 154 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 BORCS8Q96FH0 119 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 SLC25A21Q9BQT8 299 aaPredicted RBP1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 ADAT1Q9BUB4 502 aaKnown RBP1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 SPANXCQ9NY87 97 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 ASB4Q9Y574 426 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 LHFPL6Q9Y693 200 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 ZNF831Q5JPB2 1677 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 NRXN2Q9P2S2 1712 aa1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 AFDNP55196 1824 aaKnown RBP1.86□□□□□ -2.11
TRAPPC13-208ENST00000505553 GREB1Q4ZG55 1949 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 PLXND1Q9Y4D7 1925 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 IGKV1D-42A0A075B6H8 117 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 TRDV1A0A1B0GX56 115 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 A8MWV9 139 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 CST7O76096 145 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 PROSCO94903 275 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 P0DMU3 169 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 FAM231AP0DMU4 169 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 FAM231CP0DMU5 169 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 BCL2P10415 239 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 ARPC4P59998 168 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 SOSTDC1Q6X4U4 206 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 PRR15Q8IV56 129 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 BCL2L10Q9HD36 194 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 LTBP2Q14767 1821 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 COL4A5P29400 1685 aa1.85□□□□□ -2.11
TRAPPC13-208ENST00000505553 RGPD2P0DJD1 1756 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 ARFGEF2Q9Y6D5 1785 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 MUC6Q6W4X9 2439 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 ANKRD31Q8N7Z5 1873 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 F8W036 122 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 TIMM17BO60830 172 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 IFNA4P05014 189 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 TMBIM6P55061 237 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 ESRGQ1W209 222 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 SLC50A1Q9BRV3 221 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 OR2H1Q9GZK4 316 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 HS3ST2Q9Y278 367 aa1.84□□□□□ -2.11
TRAPPC13-208ENST00000505553 TJP1Q07157 1748 aa1.84□□□□□ -2.12
TRAPPC13-208ENST00000505553 ANKRD26Q9UPS8 1709 aa1.84□□□□□ -2.12
TRAPPC13-208ENST00000505553 UBR2Q8IWV8 1755 aa1.84□□□□□ -2.12
TRAPPC13-208ENST00000505553 CPAMD8Q8IZJ3 1885 aa1.84□□□□□ -2.12
TRAPPC13-208ENST00000505553 HIST1H2BKO60814 126 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 ZNF737O75373 536 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 GADD45GO95257 159 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 HIST1H2BJP06899 126 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 CXCL1P09341 107 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 UBBP0CG47 229 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 MGST1P10620 155 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 MIFP14174 115 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 967.3 ms