RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MYO9AB2RTY4 2548 aa17.2■□□□□ 0.34
PDLIM2-203ENST00000339162 NDUFA4O00483 81 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 RPLP1P05386 114 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 CDX1P47902 265 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 KRTAP1-1Q07627 177 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 PSG3Q16557 428 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 FAM231DQ6ZW35 169 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 RNF182Q8N6D2 247 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 K7EQM0 130 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 CSN1S1P47710 185 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 TMEM183AQ8IXX5 376 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 TMEM75Q8N9X5 138 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 SELENOKQ9Y6D0 94 aa17.19■□□□□ 0.34
PDLIM2-203ENST00000339162 CUBNO60494 3623 aa17.18■□□□□ 0.34
PDLIM2-203ENST00000339162 SMIM12Q96EX1 92 aa17.18■□□□□ 0.34
PDLIM2-203ENST00000339162 CHEK1O14757 476 aa17.17■□□□□ 0.34
PDLIM2-203ENST00000339162 BTF3L4Q96K17 158 aa17.17■□□□□ 0.34
PDLIM2-203ENST00000339162 CBLN1P23435 193 aa17.17■□□□□ 0.34
PDLIM2-203ENST00000339162 ACTL10Q5JWF8 245 aa17.17■□□□□ 0.34
PDLIM2-203ENST00000339162 C1orf194Q5T5A4 169 aa17.17■□□□□ 0.34
PDLIM2-203ENST00000339162 PEF1Q9UBV8 284 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-203ENST00000339162 NOTCH2Q04721 2471 aa17.16■□□□□ 0.34
PDLIM2-203ENST00000339162 SMIM27A0A1W2PRY6 76 aa17.16■□□□□ 0.34
PDLIM2-203ENST00000339162 ZC2HC1AQ96GY0 325 aa17.16■□□□□ 0.34
PDLIM2-203ENST00000339162 TRAPPC1Q9Y5R8 145 aa17.16■□□□□ 0.34
PDLIM2-203ENST00000339162 IFITM10A6NMD0 228 aa17.16■□□□□ 0.34
PDLIM2-203ENST00000339162 YAE1D1Q9NRH1 226 aa17.16■□□□□ 0.34
PDLIM2-203ENST00000339162 A0A087X0K7 114 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 TM4SF20Q53R12 229 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 LCN12Q6JVE5 192 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 C8orf49Q96NF6 230 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 ZNF253O75346 499 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 EDN2P20800 178 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 MRPL54Q6P161 138 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 C16orf54Q6UWD8 224 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 GRAMD2BQ96HH9 432 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 VGLL1Q99990 258 aa17.15■□□□□ 0.34
PDLIM2-203ENST00000339162 C19orf71A6NCJ1 209 aa17.14■□□□□ 0.33
PDLIM2-203ENST00000339162 PRAC2D3DTV9 90 aa17.14■□□□□ 0.33
PDLIM2-203ENST00000339162 FAM209BQ5JX69 171 aa17.14■□□□□ 0.33
PDLIM2-203ENST00000339162 GFI1BQ5VTD9 330 aa17.14■□□□□ 0.33
PDLIM2-203ENST00000339162 Q8TAT8 98 aa17.14■□□□□ 0.33
PDLIM2-203ENST00000339162 GLMPQ8WWB7 406 aa17.14■□□□□ 0.33
PDLIM2-203ENST00000339162 TMEM190Q8WZ59 177 aa17.14■□□□□ 0.33
PDLIM2-203ENST00000339162 DAZAP1Q96EP5 407 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-203ENST00000339162 P01737 135 aa17.13■□□□□ 0.33
PDLIM2-203ENST00000339162 C8orf86Q6ZUL3 223 aa17.13■□□□□ 0.33
PDLIM2-203ENST00000339162 TRAV9-1A0A075B6T8 112 aa17.13■□□□□ 0.33
PDLIM2-203ENST00000339162 TRBV6-1A0A0K0K1D8 114 aa17.13■□□□□ 0.33
PDLIM2-203ENST00000339162 RPP21Q9H633 154 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-203ENST00000339162 ZFP30Q9Y2G7 519 aa17.13■□□□□ 0.33
PDLIM2-203ENST00000339162 NF1P21359 2839 aa17.12■□□□□ 0.33
PDLIM2-203ENST00000339162 TRAV8-2A0A0B4J237 113 aa17.12■□□□□ 0.33
PDLIM2-203ENST00000339162 GBGT1Q8N5D6 347 aa17.12■□□□□ 0.33
PDLIM2-203ENST00000339162 NEU1Q99519 415 aa17.12■□□□□ 0.33
PDLIM2-203ENST00000339162 PDZD11Q5EBL8 140 aa17.12■□□□□ 0.33
PDLIM2-203ENST00000339162 ZNF492Q9P255 531 aa17.12■□□□□ 0.33
PDLIM2-203ENST00000339162 MTORP42345 2549 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 CD5LO43866 347 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 S100A2P29034 98 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 CRIP1P50238 77 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 ERCC8Q13216 396 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 TCF24Q7RTU0 167 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 NUP35Q8NFH5 326 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 TSKUQ8WUA8 353 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 IGKV3-7A0A075B6H7 116 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 FAM181BA6NEQ2 426 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 HIGD1CA8MV81 97 aa17.11■□□□□ 0.33
PDLIM2-203ENST00000339162 TMEM89A2RUT3 159 aa17.1■□□□□ 0.33
PDLIM2-203ENST00000339162 SNURFLB1AK76 121 aa17.1■□□□□ 0.33
PDLIM2-203ENST00000339162 GZMBP10144 247 aa17.1■□□□□ 0.33
PDLIM2-203ENST00000339162 PYY3Q5JQD4 70 aa17.1■□□□□ 0.33
PDLIM2-203ENST00000339162 SLC50A1Q9BRV3 221 aa17.1■□□□□ 0.33
PDLIM2-203ENST00000339162 IZUMO1RA6ND01 250 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 DNAJC9-AS1A6NH13 148 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 RPL11P62913 178 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 RPL19P84098 196 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 FOXE3Q13461 319 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 RHPN1-AS1Q9BWJ2 59 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 SERTM2A0A1B0GWG4 89 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 HIST2H2BDQ6DRA6 164 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 TEX29Q8N6K0 151 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 SMR3AQ99954 134 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 DAZ1Q9NQZ3 744 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 NAT8BQ9UHF3 227 aa17.09■□□□□ 0.33
PDLIM2-203ENST00000339162 ELANEP08246 267 aa17.08■□□□□ 0.33
PDLIM2-203ENST00000339162 RAB4BP61018 213 aa17.08■□□□□ 0.33
PDLIM2-203ENST00000339162 GTSF1Q8WW33 167 aa17.08■□□□□ 0.33
PDLIM2-203ENST00000339162 C16orf92Q96LL3 132 aa17.08■□□□□ 0.33
PDLIM2-203ENST00000339162 GPR61Q9BZJ8 451 aa17.08■□□□□ 0.33
PDLIM2-203ENST00000339162 MRPL18Q9H0U6 180 aaKnown RBP17.08■□□□□ 0.33
PDLIM2-203ENST00000339162 ESM1Q9NQ30 184 aa17.08■□□□□ 0.33
PDLIM2-203ENST00000339162 IGHV7-4-1A0A0J9YVY3 117 aa17.08■□□□□ 0.32
PDLIM2-203ENST00000339162 FAM106AQ4KMX7 169 aa17.08■□□□□ 0.32
PDLIM2-203ENST00000339162 GPHB5Q86YW7 130 aa17.08■□□□□ 0.32
PDLIM2-203ENST00000339162 Q8N2B8 174 aa17.08■□□□□ 0.32
PDLIM2-203ENST00000339162 OR2D3Q8NGH3 330 aa17.08■□□□□ 0.32
PDLIM2-203ENST00000339162 PRR25Q96S07 402 aa17.08■□□□□ 0.32
PDLIM2-203ENST00000339162 XKRY2A2RUG3 117 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms