RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 TRBV6-6A0A0A6YYG2 114 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 CLPSL1A2RUU4 121 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 TRIP6Q15654 476 aaKnown RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 Q6ZS52 159 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 LTN1O94822 1766 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 RCHY1Q96PM5 261 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 V9GYY9 64 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 KIF26BQ2KJY2 2108 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 RBMY1FQ15415 496 aaKnown RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 ZNF492Q9P255 531 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 TRBV25-1A0A075B6N4 114 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 DUSP14O95147 198 aaKnown RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 SPATA31D1Q6ZQQ2 1576 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 NDPQ00604 133 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 CFHR1Q03591 330 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 IL17RELQ6ZVW7 336 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 RNF5Q99942 180 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 LINC01545Q5VT33 79 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 RNF166Q96A37 237 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 NDUFA12Q9UI09 145 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 SRSF2Q01130 221 aaKnown RBP2.98□□□□□ -1.93
ATXN3-248ENST00000558190 Q6ZS49 121 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 IGHV3-11P01762 117 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 TMEM86BQ8N661 226 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 NEXMIFQ5QGS0 1516 aa2.98□□□□□ -1.93
ATXN3-248ENST00000558190 SCRT2Q9NQ03 307 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 SCN2AQ99250 2005 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 PHRF1Q9P1Y6 1649 aaKnown RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 PSPNO60542 156 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 SNRPD3P62318 126 aaKnown RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 E9PCH4 1651 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 LGALS9BQ3B8N2 356 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 LGALS9CQ6DKI2 356 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 PPRC1Q5VV67 1664 aaKnown RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 LYPD1Q8N2G4 141 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 RASL10AQ92737 203 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 PIK3C2BO00750 1634 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 FXYD2P54710 66 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 ADGRB3O60242 1522 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 J3QQQ9 107 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 LY6EQ16553 131 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 U3KQE9 123 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 LINC00643Q86TS7 51 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 CARD19Q96LW7 228 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 SPAARA0A1B0GVQ0 90 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 ZFAND3Q9H8U3 227 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 MADDQ8WXG6 1647 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 IGHV1-45A0A0A0MS14 117 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 IGKV1-39P01597 117 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 IGKV1D-39P04432 117 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 IGLC6P0CF74 106 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 CHCHD2Q9Y6H1 151 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 MEGF6O75095 1541 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 COL3A1P02461 1466 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 FAM231DQ6ZW35 169 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 RITA1Q96K30 269 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 J3KT08 172 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 FOXG1P55316 489 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 MRPL14Q6P1L8 145 aaKnown RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 AGPAT4-IT1Q9H0P7 198 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 TLN1Q9Y490 2541 aaKnown RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 ZNF646O15015 1829 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 PRB2P02812 416 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 PRCDQ00LT1 54 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 KLRD1Q13241 179 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 PHLDA1Q8WV24 401 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 NXPH4O95158 308 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 FLVCR1-AS1Q8TAF5 88 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 TRAV12-2A0A075B6T6 113 aa2.97□□□□□ -1.93
ATXN3-248ENST00000558190 C11orf68Q9H3H3 251 aaKnown RBP2.97□□□□□ -1.93
ATXN3-248ENST00000558190 NDUFA4L2Q9NRX3 87 aa2.96□□□□□ -1.93
ATXN3-248ENST00000558190 SPEF2Q9C093 1822 aa2.96□□□□□ -1.93
ATXN3-248ENST00000558190 PRR25Q96S07 402 aa2.96□□□□□ -1.93
ATXN3-248ENST00000558190 CCDC168Q8NDH2 2452 aa2.96□□□□□ -1.93
ATXN3-248ENST00000558190 CR1LQ2VPA4 569 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 C2orf66Q6UXQ4 117 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 TTTY13Q9BZ97 58 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 C10orf105Q8TEF2 133 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 PRDM6Q9NQX0 595 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 DIP2BQ9P265 1576 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 LYNX1G3V0Z9 82 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 LYNX1P0DP58 116 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 PIKFYVEQ9Y2I7 2098 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 A4D1N5 150 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 IGHV1-2P23083 117 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 DEFB105AQ8NG35 78 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 MRPL23Q16540 153 aaKnown RBP2.96□□□□□ -1.94
ATXN3-248ENST00000558190 UTF1Q5T230 341 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 TM2D2Q9BX73 214 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.96□□□□□ -1.94
ATXN3-248ENST00000558190 TRAV26-2A0A0B4J265 109 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 IFI6P09912 130 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 PRR7Q8TB68 274 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 TNRC6AQ8NDV7 1962 aaKnown RBP2.96□□□□□ -1.94
ATXN3-248ENST00000558190 NALCNQ8IZF0 1738 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 CICQ96RK0 1608 aaPredicted RBP2.96□□□□□ -1.94
ATXN3-248ENST00000558190 IGHV1-24A0A0C4DH33 117 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 COL8A2P25067 703 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 H0YGX0 51 aa2.96□□□□□ -1.94
ATXN3-248ENST00000558190 CRPP02741 224 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms