RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
CLDN4-202ENST00000431918 A1L4Q6 167 aa9.09□□□□□ -0.95
CLDN4-202ENST00000431918 HLA-DRB1P01911 266 aa9.09□□□□□ -0.95
CLDN4-202ENST00000431918 GAGE10A6NGK3 116 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 M0R2Z0 102 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 EFNA4P52798 201 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 SMAGPQ0VAQ4 97 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 TMEM249Q2WGJ8 235 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 ZNF841Q6ZN19 808 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 ARL2-SNX15V9GYD0 113 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 DSCAML1Q8TD84 2053 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 NUPR1O60356 82 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 FAM168AQ92567 244 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 CCL19Q99731 98 aa9.08□□□□□ -0.96
CLDN4-202ENST00000431918 RPL15P61313 204 aaKnown RBP9.07□□□□□ -0.96
CLDN4-202ENST00000431918 COX19Q49B96 90 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 NDFIP1Q9BT67 221 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 V9GYV3 84 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 MYO9AB2RTY4 2548 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 ORM1P02763 201 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 PDLIM4P50479 330 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 CLEC19AQ6UXS0 136 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 FXYD5Q96DB9 178 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 GRAMD2BQ96HH9 432 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 FAM167A-AS1Q96KT0 104 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 NAV2Q8IVL1 2488 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 M0R1W7 72 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 SAA4P35542 130 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 PYGO2Q9BRQ0 406 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 SONP18583 2426 aaKnown RBP9.07□□□□□ -0.96
CLDN4-202ENST00000431918 IZUMO1RA6ND01 250 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 TCRAP04437 139 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 SP5Q6BEB4 398 aaPredicted RBP9.07□□□□□ -0.96
CLDN4-202ENST00000431918 C8orf31Q8N9H6 132 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 RABAC1Q9UI14 185 aa9.07□□□□□ -0.96
CLDN4-202ENST00000431918 TRAV40A0A0B4J280 105 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 IGLC1P0CG04 106 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 TSPOP30536 169 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 TBL2Q9Y4P3 447 aaKnown RBP9.06□□□□□ -0.96
CLDN4-202ENST00000431918 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 TMEM116Q8NCL8 245 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 RPP21Q9H633 154 aaKnown RBP9.06□□□□□ -0.96
CLDN4-202ENST00000431918 IGKV1D-37A0A075B6S9 117 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 NUDT3O95989 172 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 IGLC2P0DOY2 106 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 IGLC3P0DOY3 106 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 RHOGP84095 191 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 RUSC1-AS1Q66K80 236 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 THAP8Q8NA92 274 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 C17orf77Q96MU5 243 aa9.06□□□□□ -0.96
CLDN4-202ENST00000431918 BMPR1BO00238 502 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 TYMSP04818 313 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 CLEC3BP05452 202 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 OR1N2Q8NGR9 330 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 PIMREGQ9BSJ6 248 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 F2Z2F3 143 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 SAP30O75446 220 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 PF4V1P10720 104 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 RPL7P18124 248 aaKnown RBP9.05□□□□□ -0.96
CLDN4-202ENST00000431918 ZFP36P26651 326 aaKnown RBP9.05□□□□□ -0.96
CLDN4-202ENST00000431918 PLP1P60201 277 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 C15orf32Q32M92 178 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 FBXL19-AS1Q494R0 122 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 RNF5Q99942 180 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 OTORQ9NRC9 128 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 LY96Q9Y6Y9 160 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 ZFHX4Q86UP3 3567 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 TRBV9A0A0B4J1U6 114 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 NUP35Q8NFH5 326 aa9.05□□□□□ -0.96
CLDN4-202ENST00000431918 G3V318 75 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 FAM120AOSQ5T036 256 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 PVRIGQ6DKI7 326 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 PRSS3P2Q8NHM4 247 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 FMC1Q96HJ9 113 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 LOC389332A0A1B0GUA5 103 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 TOMM40O96008 361 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 IGHV3-11P01762 117 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 HBBP68871 147 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 GNB1LQ9BYB4 327 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 C7orf69Q9H7B7 122 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 NRN1Q9NPD7 142 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 SETD2Q9BYW2 2564 aaPredicted RBP9.04□□□□□ -0.96
CLDN4-202ENST00000431918 TEX22C9J3V5 150 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 ZNF562Q6V9R5 426 aa9.04□□□□□ -0.96
CLDN4-202ENST00000431918 TRAV9-1A0A075B6T8 112 aa9.03□□□□□ -0.96
CLDN4-202ENST00000431918 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
CLDN4-202ENST00000431918 CENPEQ02224 2701 aa9.03□□□□□ -0.96
CLDN4-202ENST00000431918 IGKV2-40A0A087WW87 121 aaPredicted RBP9.03□□□□□ -0.96
CLDN4-202ENST00000431918 FBLL1A6NHQ2 334 aaKnown RBP9.03□□□□□ -0.96
CLDN4-202ENST00000431918 IGKV1-17P01599 117 aa9.03□□□□□ -0.96
CLDN4-202ENST00000431918 IGKV2D-40P01614 121 aaPredicted RBP9.03□□□□□ -0.96
CLDN4-202ENST00000431918 FA2HQ7L5A8 372 aa9.03□□□□□ -0.96
CLDN4-202ENST00000431918 SORL1Q92673 2214 aa9.03□□□□□ -0.96
CLDN4-202ENST00000431918 TMEM189A5PLL7 270 aa9.03□□□□□ -0.96
CLDN4-202ENST00000431918 TNFRSF13BO14836 293 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms