RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 M0R3E3 92 aa12.28□□□□□ -0.44
LSS-202ENST00000397728 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
LSS-202ENST00000397728 MIEN1Q9BRT3 115 aa12.28□□□□□ -0.44
LSS-202ENST00000397728 HIGD1CA8MV81 97 aa12.27□□□□□ -0.45
LSS-202ENST00000397728 ZNF138P52744 262 aa12.27□□□□□ -0.45
LSS-202ENST00000397728 FOXL1Q12952 345 aa12.27□□□□□ -0.45
LSS-202ENST00000397728 WIPF3A6NGB9 483 aa12.27□□□□□ -0.45
LSS-202ENST00000397728 Q6AWC8 147 aa12.27□□□□□ -0.45
LSS-202ENST00000397728 AGMATQ9BSE5 352 aa12.27□□□□□ -0.45
LSS-202ENST00000397728 CXorf65A6NEN9 183 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 TMEM101Q96IK0 257 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 GEMIN7Q9H840 131 aaKnown RBP12.26□□□□□ -0.45
LSS-202ENST00000397728 H3BVH4 76 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 DDTP30046 118 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 C8orf31Q8N9H6 132 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 MBD3L1Q8WWY6 194 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 PRELID3AQ96N28 172 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 DYSFO75923 2080 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 SCGB1C2P0DMR2 95 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 IL36BQ9NZH7 164 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 TRGV1A0A0A0MS02 117 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 SRSF9Q13242 221 aaKnown RBP eCLIP12.26□□□□□ -0.45
LSS-202ENST00000397728 DEFB136Q30KP8 78 aa12.26□□□□□ -0.45
LSS-202ENST00000397728 PPP1R17O96001 155 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 YPEL3P61236 119 aaPredicted RBP12.25□□□□□ -0.45
LSS-202ENST00000397728 SHANK2-AS3Q9BTD1 123 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 LEPROTL1O95214 131 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 TCRAP04437 139 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 MCRIP2Q9BUT9 160 aaKnown RBP12.25□□□□□ -0.45
LSS-202ENST00000397728 XCL2Q9UBD3 114 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 TSSC4Q9Y5U2 329 aaPredicted RBP12.25□□□□□ -0.45
LSS-202ENST00000397728 TRAV8-1A0A0A6YYK1 113 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 PLA2G2AP14555 144 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 PAPPA-AS1Q5QFB9 102 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
LSS-202ENST00000397728 INSP01308 110 aa12.24□□□□□ -0.45
LSS-202ENST00000397728 MST1LQ2TV78 715 aa12.24□□□□□ -0.45
LSS-202ENST00000397728 PKD1L2Q7Z442 2459 aa12.24□□□□□ -0.45
LSS-202ENST00000397728 SUMO2P61956 95 aaKnown RBP12.24□□□□□ -0.45
LSS-202ENST00000397728 RPL23P62829 140 aaKnown RBP12.24□□□□□ -0.45
LSS-202ENST00000397728 LOXL1Q08397 574 aaPredicted RBP12.24□□□□□ -0.45
LSS-202ENST00000397728 LYRM7Q5U5X0 104 aa12.24□□□□□ -0.45
LSS-202ENST00000397728 Q6ZSR3 168 aa12.24□□□□□ -0.45
LSS-202ENST00000397728 LINC00477Q96M19 166 aa12.24□□□□□ -0.45
LSS-202ENST00000397728 CDX1P47902 265 aaPredicted RBP12.24□□□□□ -0.45
LSS-202ENST00000397728 PSG3Q16557 428 aa12.24□□□□□ -0.45
LSS-202ENST00000397728 OCC1Q8TAD7 63 aa12.24□□□□□ -0.45
LSS-202ENST00000397728 UBE2DNLQ8IWF7 75 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 NDUFA4O00483 81 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 IGHV3-53P01767 116 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 ZNF415Q09FC8 603 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 C8orf86Q6ZUL3 223 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 FNDC10F2Z333 226 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 DEFB130BP0DP73 79 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 DEFB130AP0DP74 79 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 LURAP1LQ8IV03 231 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 MTURNQ8N3F0 131 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 OR10AG1Q8NH19 301 aa12.23□□□□□ -0.45
LSS-202ENST00000397728 LMO4P61968 165 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 HSPB9Q9BQS6 159 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 CYTL1Q9NRR1 136 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
LSS-202ENST00000397728 A8MXK9 166 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 NMUP48645 174 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 BCL6BQ8N143 479 aaPredicted RBP12.22□□□□□ -0.45
LSS-202ENST00000397728 LRRC75A-AS1Q8N1F1 130 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 Q8N7P7 452 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 CCL24O00175 119 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 CA1P00915 261 aaPredicted RBP12.22□□□□□ -0.45
LSS-202ENST00000397728 RNF182Q8N6D2 247 aa12.22□□□□□ -0.45
LSS-202ENST00000397728 CARHSP1Q9Y2V2 147 aaKnown RBP12.22□□□□□ -0.45
LSS-202ENST00000397728 C18orf15Q96N68 181 aa12.21□□□□□ -0.45
LSS-202ENST00000397728 PCP4P48539 62 aa12.21□□□□□ -0.45
LSS-202ENST00000397728 TRBV9A0A0B4J1U6 114 aa12.21□□□□□ -0.45
LSS-202ENST00000397728 IGHV3-73A0A0B4J1V6 119 aa12.21□□□□□ -0.45
LSS-202ENST00000397728 IMMP2LQ96T52 175 aa12.21□□□□□ -0.45
LSS-202ENST00000397728 A0A1B0GUS0 222 aa12.21□□□□□ -0.46
LSS-202ENST00000397728 OR10J3Q5JRS4 329 aa12.21□□□□□ -0.46
LSS-202ENST00000397728 SORL1Q92673 2214 aa12.21□□□□□ -0.46
LSS-202ENST00000397728 DIRC3C9JPN6 131 aa12.2□□□□□ -0.46
LSS-202ENST00000397728 POU2AF1Q16633 256 aa12.2□□□□□ -0.46
LSS-202ENST00000397728 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
LSS-202ENST00000397728 ORMDL3Q8N138 153 aa12.2□□□□□ -0.46
LSS-202ENST00000397728 MRPL27Q9P0M9 148 aaKnown RBP12.2□□□□□ -0.46
LSS-202ENST00000397728 GZMBP10144 247 aa12.2□□□□□ -0.46
LSS-202ENST00000397728 POLQO75417 2590 aa12.2□□□□□ -0.46
LSS-202ENST00000397728 IGHV7-81A0A0B4J1V7 117 aa12.2□□□□□ -0.46
LSS-202ENST00000397728 PCNTO95613 3336 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 ERCC8Q13216 396 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 SPINK13Q1W4C9 94 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 LYPD1Q8N2G4 141 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 TTC9CQ8N5M4 171 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 SOX21Q9Y651 276 aaPredicted RBP12.19□□□□□ -0.46
LSS-202ENST00000397728 A0A1B0GW15 77 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 CHD3Q12873 2000 aaKnown RBP12.19□□□□□ -0.46
LSS-202ENST00000397728 CDSNQ15517 529 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 C1QL4Q86Z23 238 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 C21orf62-AS1Q17RA5 79 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 CYYR1Q96J86 154 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms