RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 YDL057WQ07379 328 aa3.44□□□□□ -1.86
snR42snR42 PEX19Q07418 342 aa3.44□□□□□ -1.86
snR42snR42 MLH2Q07980 695 aa3.44□□□□□ -1.86
snR42snR42 YPL216WQ08964 1102 aa3.44□□□□□ -1.86
snR42snR42 PLP2Q12017 286 aa3.44□□□□□ -1.86
snR42snR42 ASP3-2P0CX77 362 aa3.43□□□□□ -1.86
snR42snR42 ASP3-3P0CX78 362 aa3.43□□□□□ -1.86
snR42snR42 ASP3-4P0CX79 362 aa3.43□□□□□ -1.86
snR42snR42 ASP3-1P0CZ17 362 aa3.43□□□□□ -1.86
snR42snR42 PCT1P13259 424 aa3.43□□□□□ -1.86
snR42snR42 OM45P16547 393 aa3.43□□□□□ -1.86
snR42snR42 MSH3P25336 1018 aa3.43□□□□□ -1.86
snR42snR42 PGS1P25578 521 aa3.43□□□□□ -1.86
snR42snR42 PPZ1P26570 692 aa3.43□□□□□ -1.86
snR42snR42 HIR1P32479 840 aa3.43□□□□□ -1.86
snR42snR42 VPH1P32563 840 aaKnown RBP3.43□□□□□ -1.86
snR42snR42 YEL1P34225 687 aa3.43□□□□□ -1.86
snR42snR42 LST4P34239 828 aa3.43□□□□□ -1.86
snR42snR42 BAP2P38084 609 aa3.43□□□□□ -1.86
snR42snR42 HUL4P40985 892 aa3.43□□□□□ -1.86
snR42snR42 TOS3P43637 560 aa3.43□□□□□ -1.86
snR42snR42 YNR063WP53749 607 aa3.43□□□□□ -1.86
snR42snR42 PLB2Q03674 706 aa3.43□□□□□ -1.86
snR42snR42 GIR2Q03768 265 aaPredicted RBP3.43□□□□□ -1.86
snR42snR42 RKM2Q03942 479 aa3.43□□□□□ -1.86
snR42snR42 HRQ1Q05549 1077 aa3.43□□□□□ -1.86
snR42snR42 HCR1Q05775 265 aaKnown RBP3.43□□□□□ -1.86
snR42snR42 TMA10Q06177 86 aa3.43□□□□□ -1.86
snR42snR42 CUR1Q06469 252 aa3.43□□□□□ -1.86
snR42snR42 RXT3Q07458 294 aa3.43□□□□□ -1.86
snR42snR42 MED1Q12321 566 aa3.43□□□□□ -1.86
snR42snR42 YLR422WQ06409 1932 aa3.42□□□□□ -1.86
snR42snR42 ATP1P07251 545 aaKnown RBP3.42□□□□□ -1.86
snR42snR42 SPE1P08432 466 aa3.42□□□□□ -1.86
snR42snR42 NAT1P12945 854 aaKnown RBP3.42□□□□□ -1.86
snR42snR42 APE1P14904 514 aa3.42□□□□□ -1.86
snR42snR42 BET2P20133 325 aa3.42□□□□□ -1.86
snR42snR42 IMG2P25642 146 aaPredicted RBP3.42□□□□□ -1.86
snR42snR42 COY1P34237 679 aa3.42□□□□□ -1.86
snR42snR42 YKT6P36015 200 aaKnown RBP3.42□□□□□ -1.86
snR42snR42 HMT1P38074 348 aa3.42□□□□□ -1.86
snR42snR42 STB5P38699 743 aa3.42□□□□□ -1.86
snR42snR42 SNF7P39929 240 aaKnown RBP3.42□□□□□ -1.86
snR42snR42 NPP2P39997 493 aa3.42□□□□□ -1.86
snR42snR42 FTR1P40088 404 aa3.42□□□□□ -1.86
snR42snR42 CCT5P40413 562 aaKnown RBP3.42□□□□□ -1.86
snR42snR42 YIR014WP40570 242 aa3.42□□□□□ -1.86
snR42snR42 SMC3P47037 1230 aa3.42□□□□□ -1.86
snR42snR42 SPC98P53540 846 aa3.42□□□□□ -1.86
snR42snR42 TIM8P57744 87 aa3.42□□□□□ -1.86
snR42snR42 STP1Q00947 519 aa3.42□□□□□ -1.86
snR42snR42 SNU56Q03782 492 aaKnown RBP3.42□□□□□ -1.86
snR42snR42 TIF35Q04067 274 aaKnown RBP3.42□□□□□ -1.86
snR42snR42 YCS4Q06156 1176 aa3.42□□□□□ -1.86
snR42snR42 SPP382Q06411 708 aaPredicted RBP3.42□□□□□ -1.86
snR42snR42 CDD1Q06549 142 aa3.42□□□□□ -1.86
snR42snR42 RCL1Q08096 367 aaPredicted RBP3.42□□□□□ -1.86
snR42snR42 RSB1Q08417 382 aa3.42□□□□□ -1.86
snR42snR42 TAF10Q12030 206 aa3.42□□□□□ -1.86
snR42snR42 SGT2Q12118 346 aaKnown RBP3.42□□□□□ -1.86
snR42snR42 RRD2Q12461 358 aa3.42□□□□□ -1.86
snR42snR42 CTF3Q12748 733 aa3.42□□□□□ -1.86
snR42snR42 HMG2P12684 1045 aa3.41□□□□□ -1.86
snR42snR42 PUP3P25451 205 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 PEX34P25584 144 aa3.41□□□□□ -1.86
snR42snR42 PSO2P30620 661 aa3.41□□□□□ -1.86
snR42snR42 EFB1P32471 206 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 YKL023WP36103 277 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 RFT1P38206 574 aaPredicted RBP3.41□□□□□ -1.86
snR42snR42 SHE3P38272 425 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 YHR054CP38780 354 aa3.41□□□□□ -1.86
snR42snR42 GEM1P39722 662 aa3.41□□□□□ -1.86
snR42snR42 YER130CP39959 443 aa3.41□□□□□ -1.86
snR42snR42 KAP123P40069 1113 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 FYV8P46949 817 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 POL31P46957 487 aa3.41□□□□□ -1.86
snR42snR42 ART5P53244 586 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 TNA1P53322 534 aa3.41□□□□□ -1.86
snR42snR42 HST1P53685 503 aa3.41□□□□□ -1.86
snR42snR42 NOP13P53883 403 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
snR42snR42 NSE5Q03718 556 aa3.41□□□□□ -1.86
snR42snR42 TSR1Q07381 788 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 SGO1Q08490 590 aa3.41□□□□□ -1.86
snR42snR42 GPB1Q08886 897 aa3.41□□□□□ -1.86
snR42snR42 LEA1Q08963 238 aaPredicted RBP3.41□□□□□ -1.86
snR42snR42 CDC53Q12018 815 aaKnown RBP3.41□□□□□ -1.86
snR42snR42 HRT3Q12347 344 aa3.41□□□□□ -1.86
snR42snR42 GAL80P04387 435 aa3.4□□□□□ -1.87
snR42snR42 GAL10P04397 699 aa3.4□□□□□ -1.87
snR42snR42 GPA1P08539 472 aa3.4□□□□□ -1.87
snR42snR42 SPO11P23179 398 aa3.4□□□□□ -1.87
snR42snR42 RRT12P25381 491 aa3.4□□□□□ -1.87
snR42snR42 SGF29P25554 259 aa3.4□□□□□ -1.87
snR42snR42 CYS3P31373 394 aaKnown RBP3.4□□□□□ -1.87
snR42snR42 SWI3P32591 825 aa3.4□□□□□ -1.87
snR42snR42 PIK1P39104 1066 aa3.4□□□□□ -1.87
snR42snR42 BDH2P39713 417 aa3.4□□□□□ -1.87
snR42snR42 RSM25P40496 264 aa3.4□□□□□ -1.87
snR42snR42 LCB2P40970 561 aa3.4□□□□□ -1.87
snR42snR42 COS5P47187 383 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms