RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B FDC1Q03034 503 aa1.13□□□□□ -2.23
snR39BsnR39B WAR1Q03631 944 aa1.13□□□□□ -2.23
snR39BsnR39B EFR3Q03653 782 aaKnown RBP1.13□□□□□ -2.23
snR39BsnR39B PPN1Q04119 674 aa1.13□□□□□ -2.23
snR39BsnR39B NHX1Q04121 633 aa1.13□□□□□ -2.23
snR39BsnR39B MLH2Q07980 695 aa1.13□□□□□ -2.23
snR39BsnR39B VHS3Q08438 674 aa1.13□□□□□ -2.23
snR39BsnR39B WRS1Q12109 432 aaKnown RBP1.13□□□□□ -2.23
snR39BsnR39B SEC3P33332 1336 aaKnown RBP1.13□□□□□ -2.23
snR39BsnR39B ILS1P09436 1072 aaKnown RBP1.12□□□□□ -2.23
snR39BsnR39B FRS1P15624 595 aaKnown RBP1.12□□□□□ -2.23
snR39BsnR39B ACO1P19414 778 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
snR39BsnR39B CAP1P28495 268 aaKnown RBP1.12□□□□□ -2.23
snR39BsnR39B GND1P38720 489 aaKnown RBP1.12□□□□□ -2.23
snR39BsnR39B MNN1P39106 762 aa1.12□□□□□ -2.23
snR39BsnR39B MKT1P40850 830 aaKnown RBP1.12□□□□□ -2.23
snR39BsnR39B CAF16P43569 289 aa1.12□□□□□ -2.23
snR39BsnR39B YJL049WP47048 450 aa1.12□□□□□ -2.23
snR39BsnR39B IMP4P53941 290 aaKnown RBP1.12□□□□□ -2.23
snR39BsnR39B YMR034CQ05131 434 aaPredicted RBP1.12□□□□□ -2.23
snR39BsnR39B BSC6Q08280 497 aa1.12□□□□□ -2.23
snR39BsnR39B SSF2Q12153 453 aaPredicted RBP1.12□□□□□ -2.23
snR39BsnR39B YER175W-AQ8TGU4 54 aa1.12□□□□□ -2.23
snR39BsnR39B CYB2P00175 591 aa1.11□□□□□ -2.23
snR39BsnR39B RAD4P14736 754 aa1.11□□□□□ -2.23
snR39BsnR39B YKR075CP36155 307 aa1.11□□□□□ -2.23
snR39BsnR39B CCL1P37366 393 aa1.11□□□□□ -2.23
snR39BsnR39B PCA1P38360 1216 aa1.11□□□□□ -2.23
snR39BsnR39B SSZ1P38788 538 aaKnown RBP1.11□□□□□ -2.23
snR39BsnR39B YHR202WP38887 602 aa1.11□□□□□ -2.23
snR39BsnR39B DOT6P40059 670 aaKnown RBP1.11□□□□□ -2.23
snR39BsnR39B TMN3P40071 706 aa1.11□□□□□ -2.23
snR39BsnR39B UBP7P40453 1071 aa1.11□□□□□ -2.23
snR39BsnR39B AZF1P41696 914 aa1.11□□□□□ -2.23
snR39BsnR39B PXA1P41909 870 aa1.11□□□□□ -2.23
snR39BsnR39B YJR039WP47107 1121 aa1.11□□□□□ -2.23
snR39BsnR39B MAL11P53048 616 aa1.11□□□□□ -2.23
snR39BsnR39B HOS2P53096 452 aaPredicted RBP1.11□□□□□ -2.23
snR39BsnR39B HLR1Q04429 423 aa1.11□□□□□ -2.23
snR39BsnR39B HRD3Q05787 833 aa1.11□□□□□ -2.23
snR39BsnR39B TIF3P34167 436 aaKnown RBP1.1□□□□□ -2.23
snR39BsnR39B BZZ1P38822 633 aa1.1□□□□□ -2.23
snR39BsnR39B YEL025CP39991 1188 aa1.1□□□□□ -2.23
snR39BsnR39B SAP4P53036 818 aa1.1□□□□□ -2.23
snR39BsnR39B CRZ1P53968 678 aa1.1□□□□□ -2.23
snR39BsnR39B BET4Q00618 327 aa1.1□□□□□ -2.23
snR39BsnR39B RPS15Q01855 142 aaKnown RBP1.1□□□□□ -2.23
snR39BsnR39B ADD37Q03233 198 aa1.1□□□□□ -2.23
snR39BsnR39B COG8Q04632 607 aa1.1□□□□□ -2.23
snR39BsnR39B GPN2Q08726 347 aaPredicted RBP1.1□□□□□ -2.23
snR39BsnR39B AHA1Q12449 350 aaKnown RBP1.1□□□□□ -2.23
snR39BsnR39B AAC1P04710 309 aa1.09□□□□□ -2.23
snR39BsnR39B CAN1P04817 590 aa1.09□□□□□ -2.23
snR39BsnR39B HOP1P20050 605 aa1.09□□□□□ -2.23
snR39BsnR39B GSY1P23337 708 aa1.09□□□□□ -2.23
snR39BsnR39B HOG1P32485 435 aa1.09□□□□□ -2.23
snR39BsnR39B YPT10P38146 199 aa1.09□□□□□ -2.23
snR39BsnR39B MAL31P38156 614 aa1.09□□□□□ -2.23
snR39BsnR39B RRT2P38332 387 aa1.09□□□□□ -2.23
snR39BsnR39B RAD26P40352 1085 aa1.09□□□□□ -2.23
snR39BsnR39B CIR1P42940 261 aa1.09□□□□□ -2.23
snR39BsnR39B YGR054WP53235 642 aaKnown RBP1.09□□□□□ -2.23
snR39BsnR39B MTD1Q02046 320 aaKnown RBP1.09□□□□□ -2.23
snR39BsnR39B SNU56Q03782 492 aaKnown RBP1.09□□□□□ -2.23
snR39BsnR39B STP4Q07351 490 aa1.09□□□□□ -2.23
snR39BsnR39B TIP41Q12199 356 aa1.09□□□□□ -2.23
snR39BsnR39B PNO1Q99216 274 aaKnown RBP1.09□□□□□ -2.23
snR39BsnR39B GAL11P19659 1081 aa1.08□□□□□ -2.24
snR39BsnR39B SAN1P22470 610 aa1.08□□□□□ -2.24
snR39BsnR39B CPR3P25719 182 aa1.08□□□□□ -2.24
snR39BsnR39B YJU2P28320 278 aaPredicted RBP1.08□□□□□ -2.24
snR39BsnR39B MNN4P36044 1178 aa1.08□□□□□ -2.24
snR39BsnR39B MRPL4P36517 319 aa1.08□□□□□ -2.24
snR39BsnR39B FTH1P38310 465 aa1.08□□□□□ -2.24
snR39BsnR39B RRP8P38961 392 aaKnown RBP1.08□□□□□ -2.24
snR39BsnR39B TIM54P47045 478 aa1.08□□□□□ -2.24
snR39BsnR39B BFA1P47113 574 aa1.08□□□□□ -2.24
snR39BsnR39B RCR2Q03446 210 aaKnown RBP1.08□□□□□ -2.24
snR39BsnR39B FMP42Q04991 504 aa1.08□□□□□ -2.24
snR39BsnR39B CRT10Q08226 957 aa1.08□□□□□ -2.24
snR39BsnR39B FLC1Q08967 793 aa1.08□□□□□ -2.24
snR39BsnR39B DCS2Q12123 353 aa1.08□□□□□ -2.24
snR39BsnR39B GET3Q12154 354 aaKnown RBP1.08□□□□□ -2.24
snR39BsnR39B TAH18Q12181 623 aa1.08□□□□□ -2.24
snR39BsnR39B CSR2Q12734 1121 aa1.08□□□□□ -2.24
snR39BsnR39B CDC9P04819 755 aa1.07□□□□□ -2.24
snR39BsnR39B SRD1P09007 221 aa1.07□□□□□ -2.24
snR39BsnR39B YFL068WP0CX99 160 aa1.07□□□□□ -2.24
snR39BsnR39B YLL066W-AP0CY00 160 aa1.07□□□□□ -2.24
snR39BsnR39B YLL067W-AP0CY01 160 aa1.07□□□□□ -2.24
snR39BsnR39B IME1P21190 360 aa1.07□□□□□ -2.24
snR39BsnR39B BEM4P39011 633 aa1.07□□□□□ -2.24
snR39BsnR39B GDH3P39708 457 aa1.07□□□□□ -2.24
snR39BsnR39B NUG1P40010 520 aaKnown RBP1.07□□□□□ -2.24
snR39BsnR39B YPT11P48559 417 aa1.07□□□□□ -2.24
snR39BsnR39B YMR210WQ03649 449 aa1.07□□□□□ -2.24
snR39BsnR39B USA1Q03714 838 aa1.07□□□□□ -2.24
snR39BsnR39B CYK3Q07533 885 aa1.07□□□□□ -2.24
snR39BsnR39B GSH2Q08220 491 aa1.07□□□□□ -2.24
snR39BsnR39B PCL8Q08966 492 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms