RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W MEP1P40260 492 aa4.03□□□□□ -1.76
SCD6YPR129W PIP2P52960 996 aa4.03□□□□□ -1.76
SCD6YPR129W TIM11P81449 96 aaPredicted RBP4.03□□□□□ -1.76
SCD6YPR129W YML119WQ03208 357 aa4.03□□□□□ -1.76
SCD6YPR129W ENT2Q05785 613 aa4.03□□□□□ -1.76
SCD6YPR129W ATG26Q06321 1198 aa4.03□□□□□ -1.76
SCD6YPR129W IRC3Q06683 689 aa4.03□□□□□ -1.76
SCD6YPR129W STH1P32597 1359 aa4.02□□□□□ -1.77
SCD6YPR129W RAD3P06839 778 aa4.02□□□□□ -1.77
SCD6YPR129W CLB1P24868 471 aa4.02□□□□□ -1.77
SCD6YPR129W PUP2P32379 260 aa4.02□□□□□ -1.77
SCD6YPR129W TFC3P34111 1160 aa4.02□□□□□ -1.77
SCD6YPR129W UBP12P39538 1254 aa4.02□□□□□ -1.77
SCD6YPR129W UTP18P40362 594 aaPredicted RBP4.02□□□□□ -1.77
SCD6YPR129W IAH1P41734 238 aa4.02□□□□□ -1.77
SCD6YPR129W SHE4P51534 789 aa4.02□□□□□ -1.77
SCD6YPR129W DIP5P53388 608 aa4.02□□□□□ -1.77
SCD6YPR129W ARP4P80428 489 aa4.02□□□□□ -1.77
SCD6YPR129W UFO1Q04511 668 aa4.02□□□□□ -1.77
SCD6YPR129W ERB1Q04660 807 aaKnown RBP4.02□□□□□ -1.77
SCD6YPR129W CLP1Q08685 445 aaPredicted RBP4.02□□□□□ -1.77
SCD6YPR129W SLX4Q12098 748 aa4.02□□□□□ -1.77
SCD6YPR129W KAR1P11927 433 aa4.01□□□□□ -1.77
SCD6YPR129W HMG1P12683 1054 aa4.01□□□□□ -1.77
SCD6YPR129W FAR1P21268 830 aa4.01□□□□□ -1.77
SCD6YPR129W PHO84P25297 587 aaKnown RBP4.01□□□□□ -1.77
SCD6YPR129W RPN12P32496 274 aa4.01□□□□□ -1.77
SCD6YPR129W MSS1P32559 526 aaPredicted RBP4.01□□□□□ -1.77
SCD6YPR129W SWH1P35845 1188 aa4.01□□□□□ -1.77
SCD6YPR129W APN2P38207 520 aa4.01□□□□□ -1.77
SCD6YPR129W HSL7P38274 827 aa4.01□□□□□ -1.77
SCD6YPR129W EFM2P38347 419 aa4.01□□□□□ -1.77
SCD6YPR129W TOM71P38825 639 aaKnown RBP4.01□□□□□ -1.77
SCD6YPR129W GDH3P39708 457 aa4.01□□□□□ -1.77
SCD6YPR129W CAF16P43569 289 aa4.01□□□□□ -1.77
SCD6YPR129W SET2P46995 733 aaKnown RBP4.01□□□□□ -1.77
SCD6YPR129W YGL117WP53133 265 aa4.01□□□□□ -1.77
SCD6YPR129W SNF12P53628 566 aa4.01□□□□□ -1.77
SCD6YPR129W LEE1Q02799 301 aaKnown RBP4.01□□□□□ -1.77
SCD6YPR129W CDC45Q08032 650 aa4.01□□□□□ -1.77
SCD6YPR129W DBP10Q12389 995 aaKnown RBP4.01□□□□□ -1.77
SCD6YPR129W MIH1P23748 554 aa4□□□□□ -1.77
SCD6YPR129W DPB3P27344 201 aa4□□□□□ -1.77
SCD6YPR129W BUD14P27637 709 aa4□□□□□ -1.77
SCD6YPR129W PRS1P32895 427 aaKnown RBP4□□□□□ -1.77
SCD6YPR129W NUF2P33895 451 aa4□□□□□ -1.77
SCD6YPR129W YLF2P38746 405 aa4□□□□□ -1.77
SCD6YPR129W YIL077CP40508 320 aa4□□□□□ -1.77
SCD6YPR129W NNF1P47149 201 aa4□□□□□ -1.77
SCD6YPR129W ENP2P48234 707 aaKnown RBP4□□□□□ -1.77
SCD6YPR129W RSC1P53236 928 aa4□□□□□ -1.77
SCD6YPR129W CPR8P53728 308 aa4□□□□□ -1.77
SCD6YPR129W DNM1P54861 757 aa4□□□□□ -1.77
SCD6YPR129W PHM6Q05637 104 aa4□□□□□ -1.77
SCD6YPR129W RPB4P20433 221 aaPredicted RBP3.99□□□□□ -1.77
SCD6YPR129W ROX1P25042 368 aa3.99□□□□□ -1.77
SCD6YPR129W ANP1P32629 500 aa3.99□□□□□ -1.77
SCD6YPR129W BEM3P32873 1128 aa3.99□□□□□ -1.77
SCD6YPR129W BFR1P38934 470 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
SCD6YPR129W LAM5P43560 674 aa3.99□□□□□ -1.77
SCD6YPR129W YNL050CP53952 270 aa3.99□□□□□ -1.77
SCD6YPR129W REX2P54964 269 aaKnown RBP3.99□□□□□ -1.77
SCD6YPR129W SPO19Q03029 223 aa3.99□□□□□ -1.77
SCD6YPR129W CWC21Q03375 135 aaKnown RBP3.99□□□□□ -1.77
SCD6YPR129W VPS60Q03390 229 aa3.99□□□□□ -1.77
SCD6YPR129W NHX1Q04121 633 aa3.99□□□□□ -1.77
SCD6YPR129W VPS36Q06696 566 aa3.99□□□□□ -1.77
SCD6YPR129W POM34Q12445 299 aa3.99□□□□□ -1.77
SCD6YPR129W SEC39Q12745 709 aa3.99□□□□□ -1.77
SCD6YPR129W RAD50P12753 1312 aa3.98□□□□□ -1.77
SCD6YPR129W SSK22P25390 1331 aaPredicted RBP3.98□□□□□ -1.77
SCD6YPR129W PET494P07390 489 aaPredicted RBP3.98□□□□□ -1.77
SCD6YPR129W ERG20P08524 352 aaKnown RBP3.98□□□□□ -1.77
SCD6YPR129W SSB1P11484 613 aaKnown RBP3.98□□□□□ -1.77
SCD6YPR129W NAT1P12945 854 aaKnown RBP3.98□□□□□ -1.77
SCD6YPR129W MER1P16523 270 aa3.98□□□□□ -1.77
SCD6YPR129W PET123P17558 318 aa3.98□□□□□ -1.77
SCD6YPR129W SEC15P22224 910 aa3.98□□□□□ -1.77
SCD6YPR129W ACP1P32463 125 aa3.98□□□□□ -1.77
SCD6YPR129W EUG1P32474 517 aa3.98□□□□□ -1.77
SCD6YPR129W MRE11P32829 692 aa3.98□□□□□ -1.77
SCD6YPR129W SHC1P39000 512 aa3.98□□□□□ -1.77
SCD6YPR129W ARB1P40024 610 aaKnown RBP3.98□□□□□ -1.77
SCD6YPR129W SSB2P40150 613 aaKnown RBP3.98□□□□□ -1.77
SCD6YPR129W HOP2P53187 214 aa3.98□□□□□ -1.77
SCD6YPR129W ATP23P53722 227 aa3.98□□□□□ -1.77
SCD6YPR129W IST1P53843 298 aaPredicted RBP3.98□□□□□ -1.77
SCD6YPR129W PNG1Q02890 363 aa3.98□□□□□ -1.77
SCD6YPR129W SNZ1Q03148 297 aa3.98□□□□□ -1.77
SCD6YPR129W SXM1Q04175 944 aaKnown RBP3.98□□□□□ -1.77
SCD6YPR129W VTI1Q04338 217 aa3.98□□□□□ -1.77
SCD6YPR129W TAP42Q04372 366 aa3.98□□□□□ -1.77
SCD6YPR129W YMR111CQ04461 462 aaPredicted RBP3.98□□□□□ -1.77
SCD6YPR129W NNT1Q05874 261 aa3.98□□□□□ -1.77
SCD6YPR129W SMD2Q06217 110 aaKnown RBP3.98□□□□□ -1.77
SCD6YPR129W DBP9Q06218 594 aaKnown RBP3.98□□□□□ -1.77
SCD6YPR129W YFT2Q06676 274 aa3.98□□□□□ -1.77
SCD6YPR129W YOL057WQ08225 711 aa3.98□□□□□ -1.77
SCD6YPR129W FRE7Q12333 620 aa3.98□□□□□ -1.77
SCD6YPR129W LEU2P04173 364 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms