RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	TDA3	P38758	523 aa		4.75	□□□□□ -1.65
FDH1	YOR388C	YHR097C	P38809	366 aa	Known RBP	4.75	□□□□□ -1.65
FDH1	YOR388C	YJR096W	P47137	282 aa		4.75	□□□□□ -1.65
FDH1	YOR388C	MHP1	P43638	1398 aa		4.75	□□□□□ -1.65
FDH1	YOR388C	ADR1	P07248	1323 aa		4.74	□□□□□ -1.65
FDH1	YOR388C	LEU2	P04173	364 aa	Predicted RBP	4.74	□□□□□ -1.65
FDH1	YOR388C	NTH1	P32356	751 aa		4.74	□□□□□ -1.65
FDH1	YOR388C	YMC2	P38087	329 aa		4.74	□□□□□ -1.65
FDH1	YOR388C	MUP3	P38734	546 aa		4.74	□□□□□ -1.65
FDH1	YOR388C	HLJ1	P48353	224 aa		4.74	□□□□□ -1.65
FDH1	YOR388C	MRK1	P50873	501 aa		4.74	□□□□□ -1.65
FDH1	YOR388C	SPC98	P53540	846 aa		4.74	□□□□□ -1.65
FDH1	YOR388C	YSH1	Q06224	779 aa	Predicted RBP	4.74	□□□□□ -1.65
FDH1	YOR388C	SWI6	P09959	803 aa		4.73	□□□□□ -1.65
FDH1	YOR388C	PRP22	P24384	1145 aa	Known RBP	4.73	□□□□□ -1.65
FDH1	YOR388C	CAB3	P36076	571 aa		4.73	□□□□□ -1.65
FDH1	YOR388C	APL3	P38065	1025 aa		4.73	□□□□□ -1.65
FDH1	YOR388C	CCT5	P40413	562 aa	Known RBP	4.73	□□□□□ -1.65
FDH1	YOR388C	RPN11	P43588	306 aa	Known RBP	4.73	□□□□□ -1.65
FDH1	YOR388C	NMA2	P53204	395 aa		4.73	□□□□□ -1.65
FDH1	YOR388C	RCR2	Q03446	210 aa	Known RBP	4.73	□□□□□ -1.65
FDH1	YOR388C	RPS9B	P05755	195 aa	Known RBP	4.72	□□□□□ -1.65
FDH1	YOR388C	IME1	P21190	360 aa		4.72	□□□□□ -1.65
FDH1	YOR388C	DOT5	P40553	215 aa		4.72	□□□□□ -1.65
FDH1	YOR388C	BUD8	P41698	603 aa		4.72	□□□□□ -1.65
FDH1	YOR388C	PXA1	P41909	870 aa		4.72	□□□□□ -1.65
FDH1	YOR388C	YPS7	Q06325	596 aa		4.72	□□□□□ -1.65
FDH1	YOR388C	THI73	Q07904	523 aa		4.72	□□□□□ -1.65
FDH1	YOR388C	RKI1	Q12189	258 aa		4.72	□□□□□ -1.65
FDH1	YOR388C	YRF1-2	P40105	1681 aa		4.72	□□□□□ -1.65
FDH1	YOR388C	PSK1	P31374	1356 aa		4.71	□□□□□ -1.66
FDH1	YOR388C	PRP19	P32523	503 aa	Known RBP	4.71	□□□□□ -1.66
FDH1	YOR388C	MIT1	P40002	666 aa		4.71	□□□□□ -1.66
FDH1	YOR388C	DIP5	P53388	608 aa		4.71	□□□□□ -1.66
FDH1	YOR388C	IZH3	Q07959	543 aa		4.71	□□□□□ -1.66
FDH1	YOR388C	SLM3	Q12093	417 aa		4.71	□□□□□ -1.66
FDH1	YOR388C	LAM4	P38800	1345 aa		4.71	□□□□□ -1.66
FDH1	YOR388C	ADE6	P38972	1358 aa	Known RBP	4.7	□□□□□ -1.66
FDH1	YOR388C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
FDH1	YOR388C	SNF12	P53628	566 aa		4.7	□□□□□ -1.66
FDH1	YOR388C	NOP15	P53927	220 aa	Predicted RBP	4.7	□□□□□ -1.66
FDH1	YOR388C	MTQ2	Q03920	221 aa	Predicted RBP	4.7	□□□□□ -1.66
FDH1	YOR388C	PPN1	Q04119	674 aa		4.7	□□□□□ -1.66
FDH1	YOR388C	THI7	Q05998	598 aa		4.7	□□□□□ -1.66
FDH1	YOR388C	STP4	Q07351	490 aa		4.7	□□□□□ -1.66
FDH1	YOR388C	SLK19	Q08581	821 aa	Known RBP	4.7	□□□□□ -1.66
FDH1	YOR388C	PHO5	P00635	467 aa		4.69	□□□□□ -1.66
FDH1	YOR388C	VPS34	P22543	875 aa		4.69	□□□□□ -1.66
FDH1	YOR388C	HXT6	P39003	570 aa	Known RBP	4.69	□□□□□ -1.66
FDH1	YOR388C	HXT7	P39004	570 aa		4.69	□□□□□ -1.66
FDH1	YOR388C	GZF3	P42944	551 aa	Known RBP	4.69	□□□□□ -1.66
FDH1	YOR388C	PMT3	P47190	753 aa		4.69	□□□□□ -1.66
FDH1	YOR388C	YGR153W	P48238	217 aa		4.69	□□□□□ -1.66
FDH1	YOR388C	LYS4	P49367	693 aa	Predicted RBP	4.69	□□□□□ -1.66
FDH1	YOR388C	ECM9	Q02202	377 aa		4.69	□□□□□ -1.66
FDH1	YOR388C	UFO1	Q04511	668 aa		4.69	□□□□□ -1.66
FDH1	YOR388C	RPS21B	Q3E754	87 aa	Known RBP	4.69	□□□□□ -1.66
FDH1	YOR388C	RPS17A	P02407	136 aa	Known RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	RPS17B	P14127	136 aa	Known RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	RPA135	P22138	1203 aa	Known RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	SAT4	P25333	603 aa	Known RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	UGP1	P32861	499 aa	Known RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	YKL133C	P36066	463 aa		4.68	□□□□□ -1.66
FDH1	YOR388C	PMC1	P38929	1173 aa	Predicted RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	SPO1	P53541	631 aa		4.68	□□□□□ -1.66
FDH1	YOR388C	NGL2	Q03264	515 aa	Known RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	MRI1	Q06489	411 aa	Known RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	YTM1	Q12024	460 aa	Predicted RBP	4.68	□□□□□ -1.66
FDH1	YOR388C	HFI1	Q12060	488 aa		4.68	□□□□□ -1.66
FDH1	YOR388C	RRP5	Q05022	1729 aa	Known RBP	4.67	□□□□□ -1.66
FDH1	YOR388C	STE12	P13574	688 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	SEC65	P29478	273 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	IME2	P32581	645 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	NPR2	P39923	615 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	PMT6	P42934	759 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	IES1	P43579	692 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	ASN1	P49089	572 aa	Known RBP	4.67	□□□□□ -1.66
FDH1	YOR388C	DAK1	P54838	584 aa	Known RBP	4.67	□□□□□ -1.66
FDH1	YOR388C	UME1	Q03010	460 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	FDC1	Q03034	503 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	NSE5	Q03718	556 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	HOF1	Q05080	669 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	APM4	Q99186	491 aa		4.67	□□□□□ -1.66
FDH1	YOR388C	ADE5,7	P07244	802 aa	Known RBP	4.66	□□□□□ -1.66
FDH1	YOR388C	HOM2	P13663	365 aa	Known RBP	4.66	□□□□□ -1.66
FDH1	YOR388C	PRE4	P30657	266 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	OAF3	P36023	863 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	ELF1	P36053	145 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	DID4	P36108	232 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	DUN1	P39009	513 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	MNN11	P46985	422 aa	Known RBP	4.66	□□□□□ -1.66
FDH1	YOR388C	YJR142W	P47173	342 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	TAF4	P50105	388 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	YDR179W-A	Q03983	463 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	OSW1	Q08692	278 aa		4.66	□□□□□ -1.66
FDH1	YOR388C	MDM20	Q12387	796 aa	Known RBP	4.66	□□□□□ -1.66
FDH1	YOR388C	YML133C	Q03099	1374 aa		4.65	□□□□□ -1.66
FDH1	YOR388C	YLL067C	Q07888	1374 aa		4.65	□□□□□ -1.66
FDH1	YOR388C	YLL066C	Q99208	1374 aa		4.65	□□□□□ -1.66
FDH1	YOR388C	TPK2	P06245	380 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms