RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A HOP1P20050 605 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A HXT4P32467 576 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A SER1P33330 395 aaKnown RBP3.69□□□□□ -1.82
YOR343W-AYOR343W-A EHT1P38295 451 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A PIH1P38768 344 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A ENP2P48234 707 aaKnown RBP3.69□□□□□ -1.82
YOR343W-AYOR343W-A RNR4P49723 345 aaKnown RBP3.69□□□□□ -1.82
YOR343W-AYOR343W-A COQ6P53318 479 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A MPS1P54199 764 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A STP1Q00947 519 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A MFM1Q02783 413 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A YCG1Q06680 1035 aa3.69□□□□□ -1.82
YOR343W-AYOR343W-A DAL3P32459 195 aa3.68□□□□□ -1.82
YOR343W-AYOR343W-A THI6P41835 540 aa3.68□□□□□ -1.82
YOR343W-AYOR343W-A PSA1P41940 361 aaKnown RBP3.68□□□□□ -1.82
YOR343W-AYOR343W-A BST1P43571 1029 aa3.68□□□□□ -1.82
YOR343W-AYOR343W-A BPL1P48445 690 aaPredicted RBP3.68□□□□□ -1.82
YOR343W-AYOR343W-A CEF1Q03654 590 aaPredicted RBP3.68□□□□□ -1.82
YOR343W-AYOR343W-A ARR3Q06598 404 aa3.68□□□□□ -1.82
YOR343W-AYOR343W-A AIM41Q12032 185 aa3.68□□□□□ -1.82
YOR343W-AYOR343W-A YPR027CQ12079 277 aa3.68□□□□□ -1.82
YOR343W-AYOR343W-A SEC3P33332 1336 aaKnown RBP3.67□□□□□ -1.82
YOR343W-AYOR343W-A HEM1P09950 548 aaPredicted RBP3.67□□□□□ -1.82
YOR343W-AYOR343W-A YPT10P38146 199 aa3.67□□□□□ -1.82
YOR343W-AYOR343W-A BRN1P38170 754 aa3.67□□□□□ -1.82
YOR343W-AYOR343W-A LRO1P40345 661 aa3.67□□□□□ -1.82
YOR343W-AYOR343W-A YFL015CP43578 164 aa3.67□□□□□ -1.82
YOR343W-AYOR343W-A YPL068CQ02749 293 aa3.67□□□□□ -1.82
YOR343W-AYOR343W-A YDL073WQ07454 984 aa3.67□□□□□ -1.82
YOR343W-AYOR343W-A NOP56Q12460 504 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
YOR343W-AYOR343W-A WHI2P12611 486 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A BEM3P32873 1128 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A DHR2P36009 735 aaPredicted RBP3.66□□□□□ -1.82
YOR343W-AYOR343W-A UBP12P39538 1254 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A YEL025CP39991 1188 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A SAP4P53036 818 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A YGL081WP53156 320 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A ATP23P53722 227 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A USA1Q03714 838 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A MRN1Q08925 612 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
YOR343W-AYOR343W-A YPL216WQ08964 1102 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A RMP1Q12530 201 aa3.66□□□□□ -1.82
YOR343W-AYOR343W-A ATP12P22135 325 aa3.65□□□□□ -1.83
YOR343W-AYOR343W-A YUR1P26725 428 aa3.65□□□□□ -1.83
YOR343W-AYOR343W-A GSY2P27472 705 aa3.65□□□□□ -1.83
YOR343W-AYOR343W-A DGR2P32330 852 aa3.65□□□□□ -1.83
YOR343W-AYOR343W-A NMD5P46970 1048 aa3.65□□□□□ -1.83
YOR343W-AYOR343W-A RSC9Q03124 581 aa3.65□□□□□ -1.83
YOR343W-AYOR343W-A NGL1Q08213 363 aaKnown RBP3.65□□□□□ -1.83
YOR343W-AYOR343W-A PRS5Q12265 496 aaKnown RBP3.65□□□□□ -1.83
YOR343W-AYOR343W-A RPC34P32910 317 aa3.64□□□□□ -1.83
YOR343W-AYOR343W-A EXO1P39875 702 aa3.64□□□□□ -1.83
YOR343W-AYOR343W-A GPP2P40106 250 aaKnown RBP3.64□□□□□ -1.83
YOR343W-AYOR343W-A DUG1P43616 481 aaKnown RBP3.64□□□□□ -1.83
YOR343W-AYOR343W-A SCS3P53012 380 aa3.64□□□□□ -1.83
YOR343W-AYOR343W-A SQS1P53866 767 aaKnown RBP3.64□□□□□ -1.83
YOR343W-AYOR343W-A SKY1Q03656 742 aa3.64□□□□□ -1.83
YOR343W-AYOR343W-A TDA9Q04545 1251 aa3.64□□□□□ -1.83
YOR343W-AYOR343W-A IRC3Q06683 689 aa3.64□□□□□ -1.83
YOR343W-AYOR343W-A PCL8Q08966 492 aa3.64□□□□□ -1.83
YOR343W-AYOR343W-A YLR111WQ12528 110 aa3.64□□□□□ -1.83
YOR343W-AYOR343W-A YMR084WA2P2R3 262 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A RNR3P21672 869 aaKnown RBP3.63□□□□□ -1.83
YOR343W-AYOR343W-A CAP1P28495 268 aaKnown RBP3.63□□□□□ -1.83
YOR343W-AYOR343W-A LOT5P34234 306 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A YEN1P40028 759 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A PEA2P40091 420 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A TDA10P42938 290 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A NIT2P47016 307 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A YJL043WP47053 257 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A PEF1P53238 335 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A ORM2Q06144 216 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A TRE2Q08693 809 aa3.63□□□□□ -1.83
YOR343W-AYOR343W-A AEP2P22136 580 aa3.62□□□□□ -1.83
YOR343W-AYOR343W-A EUG1P32474 517 aa3.62□□□□□ -1.83
YOR343W-AYOR343W-A RMA1P36001 430 aaKnown RBP3.62□□□□□ -1.83
YOR343W-AYOR343W-A CCL1P37366 393 aa3.62□□□□□ -1.83
YOR343W-AYOR343W-A YJL193WP39542 402 aa3.62□□□□□ -1.83
YOR343W-AYOR343W-A IRC5P43610 853 aa3.62□□□□□ -1.83
YOR343W-AYOR343W-A BSP1Q06604 576 aa3.62□□□□□ -1.83
YOR343W-AYOR343W-A VPS5Q92331 675 aa3.62□□□□□ -1.83
YOR343W-AYOR343W-A TUF1P02992 437 aaKnown RBP3.61□□□□□ -1.83
YOR343W-AYOR343W-A YEL076C-AP0CX16 216 aa3.61□□□□□ -1.83
YOR343W-AYOR343W-A YLR464WP0CX17 216 aa3.61□□□□□ -1.83
YOR343W-AYOR343W-A VPS33P20795 691 aa3.61□□□□□ -1.83
YOR343W-AYOR343W-A YJU2P28320 278 aaPredicted RBP3.61□□□□□ -1.83
YOR343W-AYOR343W-A APD1P38281 316 aa3.61□□□□□ -1.83
YOR343W-AYOR343W-A SRP68P38687 599 aaKnown RBP3.61□□□□□ -1.83
YOR343W-AYOR343W-A YEL076CP39971 216 aa3.61□□□□□ -1.83
YOR343W-AYOR343W-A MTD1Q02046 320 aaKnown RBP3.61□□□□□ -1.83
YOR343W-AYOR343W-A SAE2P46946 345 aa3.6□□□□□ -1.83
YOR343W-AYOR343W-A YNL092WP53934 400 aa3.6□□□□□ -1.83
YOR343W-AYOR343W-A ERG13P54839 491 aaKnown RBP3.6□□□□□ -1.83
YOR343W-AYOR343W-A SPN1Q06505 410 aaPredicted RBP3.6□□□□□ -1.83
YOR343W-AYOR343W-A TGS1Q12052 315 aa3.6□□□□□ -1.83
YOR343W-AYOR343W-A RDL1Q12305 139 aaKnown RBP3.6□□□□□ -1.83
YOR343W-AYOR343W-A PCK1P10963 549 aa3.59□□□□□ -1.83
YOR343W-AYOR343W-A COX11P19516 300 aaKnown RBP3.59□□□□□ -1.83
YOR343W-AYOR343W-A GRX4P32642 244 aa3.59□□□□□ -1.83
YOR343W-AYOR343W-A EAF5P39995 279 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms