RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	UME1	Q03010	460 aa		5.8	□□□□□ -1.48
PCL1	YNL289W	GIS1	Q03833	894 aa		5.8	□□□□□ -1.48
PCL1	YNL289W	YPS7	Q06325	596 aa		5.8	□□□□□ -1.48
PCL1	YNL289W	RIX7	Q07844	837 aa	Known RBP	5.8	□□□□□ -1.48
PCL1	YNL289W	CLF1	Q12309	687 aa	Predicted RBP	5.8	□□□□□ -1.48
PCL1	YNL289W	POM34	Q12445	299 aa		5.8	□□□□□ -1.48
PCL1	YNL289W	ERG20	P08524	352 aa	Known RBP	5.79	□□□□□ -1.48
PCL1	YNL289W	CDC43	P18898	376 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	IME1	P21190	360 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	HXT6	P39003	570 aa	Known RBP	5.79	□□□□□ -1.48
PCL1	YNL289W	HXT7	P39004	570 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	RTR1	P40084	226 aa	Predicted RBP	5.79	□□□□□ -1.48
PCL1	YNL289W	PIG2	P40187	538 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	CCT5	P40413	562 aa	Known RBP	5.79	□□□□□ -1.48
PCL1	YNL289W	BIT61	P47041	543 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	MPP10	P47083	593 aa	Known RBP	5.79	□□□□□ -1.48
PCL1	YNL289W	PMT3	P47190	753 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	YGR153W	P48238	217 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	ECM9	Q02202	377 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	CHS5	Q12114	671 aa	Known RBP	5.79	□□□□□ -1.48
PCL1	YNL289W	BUG1	Q12191	341 aa		5.79	□□□□□ -1.48
PCL1	YNL289W	GFA1	P14742	717 aa	Known RBP	5.78	□□□□□ -1.48
PCL1	YNL289W	PRP28	P23394	588 aa		5.78	□□□□□ -1.48
PCL1	YNL289W	PRD1	P25375	712 aa		5.78	□□□□□ -1.48
PCL1	YNL289W	YIL077C	P40508	320 aa		5.78	□□□□□ -1.48
PCL1	YNL289W	RFX1	P48743	811 aa		5.78	□□□□□ -1.48
PCL1	YNL289W	CTR1	P49573	406 aa		5.78	□□□□□ -1.48
PCL1	YNL289W	DOS2	P54858	310 aa		5.78	□□□□□ -1.48
PCL1	YNL289W	YMR210W	Q03649	449 aa		5.78	□□□□□ -1.48
PCL1	YNL289W	KCC4	P25389	1037 aa		5.77	□□□□□ -1.49
PCL1	YNL289W	MSS1	P32559	526 aa	Predicted RBP	5.77	□□□□□ -1.49
PCL1	YNL289W	GLG1	P36143	616 aa		5.77	□□□□□ -1.49
PCL1	YNL289W	BDH2	P39713	417 aa		5.77	□□□□□ -1.49
PCL1	YNL289W	GPP1	P41277	250 aa	Known RBP	5.77	□□□□□ -1.49
PCL1	YNL289W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
PCL1	YNL289W	EAF6	P47128	113 aa		5.77	□□□□□ -1.49
PCL1	YNL289W	RMT2	Q03305	412 aa		5.77	□□□□□ -1.49
PCL1	YNL289W	RTT109	Q07794	436 aa		5.77	□□□□□ -1.49
PCL1	YNL289W	EMP70	P32802	667 aa		5.76	□□□□□ -1.49
PCL1	YNL289W	GZF3	P42944	551 aa	Known RBP	5.76	□□□□□ -1.49
PCL1	YNL289W	MPS3	P47069	682 aa		5.76	□□□□□ -1.49
PCL1	YNL289W	BFA1	P47113	574 aa		5.76	□□□□□ -1.49
PCL1	YNL289W	NOP15	P53927	220 aa	Predicted RBP	5.76	□□□□□ -1.49
PCL1	YNL289W	STP4	Q07351	490 aa		5.76	□□□□□ -1.49
PCL1	YNL289W	DMC1	P25453	334 aa		5.75	□□□□□ -1.49
PCL1	YNL289W	COS111	P38308	924 aa		5.75	□□□□□ -1.49
PCL1	YNL289W	YHR097C	P38809	366 aa	Known RBP	5.75	□□□□□ -1.49
PCL1	YNL289W	OAF1	P39720	1047 aa	Predicted RBP	5.75	□□□□□ -1.49
PCL1	YNL289W	BUD8	P41698	603 aa		5.75	□□□□□ -1.49
PCL1	YNL289W	YGR151C	P53287	111 aa		5.75	□□□□□ -1.49
PCL1	YNL289W	ZDS2	P54786	942 aa		5.75	□□□□□ -1.49
PCL1	YNL289W	VBA4	Q04602	768 aa	Known RBP	5.75	□□□□□ -1.49
PCL1	YNL289W	YFT2	Q06676	274 aa		5.75	□□□□□ -1.49
PCL1	YNL289W	CTI6	Q08923	506 aa		5.75	□□□□□ -1.49
PCL1	YNL289W	YTM1	Q12024	460 aa	Predicted RBP	5.75	□□□□□ -1.49
PCL1	YNL289W	NYV1	Q12255	253 aa		5.75	□□□□□ -1.49
PCL1	YNL289W	RPS17A	P02407	136 aa	Known RBP	5.74	□□□□□ -1.49
PCL1	YNL289W	RPS21A	P0C0V8	87 aa	Known RBP	5.74	□□□□□ -1.49
PCL1	YNL289W	RPS17B	P14127	136 aa	Known RBP	5.74	□□□□□ -1.49
PCL1	YNL289W	HCA4	P20448	770 aa	Known RBP	5.74	□□□□□ -1.49
PCL1	YNL289W	KIN82	P25341	720 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	FUB1	P25659	250 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	SEC65	P29478	273 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	OAF3	P36023	863 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	BRN1	P38170	754 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	FAT1	P38225	669 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	YGR237C	P50089	785 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	YGL082W	P53155	381 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	YNL050C	P53952	270 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	HEF3	P53978	1044 aa	Known RBP	5.74	□□□□□ -1.49
PCL1	YNL289W	YDL144C	Q07589	356 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	HFI1	Q12060	488 aa		5.74	□□□□□ -1.49
PCL1	YNL289W	LYS2	P07702	1392 aa		5.73	□□□□□ -1.49
PCL1	YNL289W	CTP1	P38152	299 aa		5.73	□□□□□ -1.49
PCL1	YNL289W	KHA1	P40309	873 aa		5.73	□□□□□ -1.49
PCL1	YNL289W	MNN11	P46985	422 aa	Known RBP	5.73	□□□□□ -1.49
PCL1	YNL289W	YHM2	Q04013	314 aa		5.73	□□□□□ -1.49
PCL1	YNL289W	YDL086W	Q07505	273 aa		5.73	□□□□□ -1.49
PCL1	YNL289W	RPS9B	P05755	195 aa	Known RBP	5.72	□□□□□ -1.49
PCL1	YNL289W	SER1	P33330	395 aa	Known RBP	5.72	□□□□□ -1.49
PCL1	YNL289W	KSP1	P38691	1029 aa	Known RBP	5.72	□□□□□ -1.49
PCL1	YNL289W	IES1	P43579	692 aa		5.72	□□□□□ -1.49
PCL1	YNL289W	HFD1	Q04458	532 aa		5.72	□□□□□ -1.49
PCL1	YNL289W	BMS1	Q08965	1183 aa	Known RBP	5.72	□□□□□ -1.49
PCL1	YNL289W	FAP7	Q12055	197 aa	Predicted RBP	5.72	□□□□□ -1.49
PCL1	YNL289W	APM4	Q99186	491 aa		5.72	□□□□□ -1.49
PCL1	YNL289W	GLN4	P13188	809 aa	Known RBP	5.71	□□□□□ -1.5
PCL1	YNL289W	SUI2	P20459	304 aa	Known RBP	5.71	□□□□□ -1.5
PCL1	YNL289W	PPZ2	P33329	710 aa		5.71	□□□□□ -1.5
PCL1	YNL289W	GMH1	P36125	273 aa		5.71	□□□□□ -1.5
PCL1	YNL289W	ATF1	P40353	525 aa		5.71	□□□□□ -1.5
PCL1	YNL289W	YIL166C	P40445	542 aa		5.71	□□□□□ -1.5
PCL1	YNL289W	VPS64	Q03944	604 aa		5.71	□□□□□ -1.5
PCL1	YNL289W	ABF1	P14164	731 aa		5.7	□□□□□ -1.5
PCL1	YNL289W	SEC15	P22224	910 aa		5.7	□□□□□ -1.5
PCL1	YNL289W	ADY2	P25613	283 aa		5.7	□□□□□ -1.5
PCL1	YNL289W	YPT53	P36019	220 aa		5.7	□□□□□ -1.5
PCL1	YNL289W	FLO10	P36170	1169 aa		5.7	□□□□□ -1.5
PCL1	YNL289W	UBP12	P39538	1254 aa		5.7	□□□□□ -1.5
PCL1	YNL289W	PXA1	P41909	870 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms