RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP53	YMR153W	TMA108	P40462	946 aa		7.95	□□□□□ -1.14
NUP53	YMR153W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.95	□□□□□ -1.14	not detected
NUP53	YMR153W	PYK2	P52489	506 aa	Known RBP	7.95	□□□□□ -1.14
NUP53	YMR153W	PEX31	P53203	462 aa		7.95	□□□□□ -1.14
NUP53	YMR153W	BET4	Q00618	327 aa		7.95	□□□□□ -1.14
NUP53	YMR153W	NDD1	Q08887	554 aa		7.95	□□□□□ -1.14
NUP53	YMR153W	TOR1	P35169	2470 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	RAD3	P06839	778 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	HSF1	P10961	833 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	DUN1	P39009	513 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	YMR124W	P39523	943 aa	Known RBP	7.94	□□□□□ -1.14
NUP53	YMR153W	TMN3	P40071	706 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	YIL054W	P40524	105 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	RSM7	P47150	247 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	FLC3	P53121	802 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	SMA1	Q02651	245 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	SXM1	Q04175	944 aa	Known RBP	7.94	□□□□□ -1.14
NUP53	YMR153W	YSH1	Q06224	779 aa	Predicted RBP	7.94	□□□□□ -1.14
NUP53	YMR153W	YPR148C	Q06523	435 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	PEX15	Q08215	383 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	THI21	Q08975	551 aa		7.94	□□□□□ -1.14
NUP53	YMR153W	HIS1	P00498	297 aa	Known RBP	7.93	□□□□□ -1.14
NUP53	YMR153W	EST1	P17214	699 aa	Predicted RBP	7.93	□□□□□ -1.14
NUP53	YMR153W	SPC110	P32380	944 aa		7.93	□□□□□ -1.14
NUP53	YMR153W	ABD1	P32783	436 aa	Predicted RBP	7.93	□□□□□ -1.14
NUP53	YMR153W	LAM1	P38851	1228 aa		7.93	□□□□□ -1.14
NUP53	YMR153W	PRM9	P39551	298 aa		7.93	□□□□□ -1.14
NUP53	YMR153W	ATG3	P40344	310 aa		7.93	□□□□□ -1.14
NUP53	YMR153W	EMW1	P42842	904 aa	Known RBP	7.93	□□□□□ -1.14
NUP53	YMR153W	SND1	Q04007	877 aa		7.93	□□□□□ -1.14
NUP53	YMR153W	ARA2	Q04212	335 aa		7.93	□□□□□ -1.14
NUP53	YMR153W	RSB1	Q08417	382 aa		7.93	□□□□□ -1.14
NUP53	YMR153W	FSH1	P38777	243 aa	Known RBP	7.92	□□□□□ -1.14
NUP53	YMR153W	EXO1	P39875	702 aa		7.92	□□□□□ -1.14
NUP53	YMR153W	VAC8	P39968	578 aa		7.92	□□□□□ -1.14
NUP53	YMR153W	EDC3	P39998	551 aa	Known RBP	7.92	□□□□□ -1.14
NUP53	YMR153W	JJJ1	P53863	590 aa		7.92	□□□□□ -1.14
NUP53	YMR153W	ADI1	Q03677	179 aa		7.92	□□□□□ -1.14
NUP53	YMR153W	YLR012C	Q07927	99 aa		7.92	□□□□□ -1.14
NUP53	YMR153W	YPK1	P12688	680 aa	Known RBP	7.91	□□□□□ -1.14
NUP53	YMR153W	TRX1	P22217	103 aa	Known RBP	7.91	□□□□□ -1.14
NUP53	YMR153W	ADY2	P25613	283 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	KNS1	P32350	737 aa	Predicted RBP	7.91	□□□□□ -1.14
NUP53	YMR153W	MRPL40	P36534	297 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	SWC5	P38326	303 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	PCF11	P39081	626 aa	Predicted RBP	7.91	□□□□□ -1.14
NUP53	YMR153W	KHA1	P40309	873 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	STR2	P47164	639 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	PEX13	P80667	386 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	SYH1	Q02875	849 aa	Known RBP	7.91	□□□□□ -1.14
NUP53	YMR153W	UTP5	Q04177	643 aa	Known RBP	7.91	□□□□□ -1.14
NUP53	YMR153W	YMR018W	Q04364	514 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	ERV41	Q04651	352 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	LCB5	Q06147	687 aa	Known RBP	7.91	□□□□□ -1.14
NUP53	YMR153W	YDL073W	Q07454	984 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	CIR2	Q08822	631 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	NEW1	Q08972	1196 aa	Known RBP	7.91	□□□□□ -1.14
NUP53	YMR153W	SPO21	Q12411	609 aa		7.91	□□□□□ -1.14
NUP53	YMR153W	MTF2	P10849	440 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	PYC1	P11154	1178 aa	Known RBP	7.9	□□□□□ -1.14
NUP53	YMR153W	DAL81	P21657	970 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	RRP43	P25359	394 aa	Predicted RBP	7.9	□□□□□ -1.14
NUP53	YMR153W	ADD66	P36040	267 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	MIC60	P36112	540 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	SAK1	P38990	1142 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	PIK1	P39104	1066 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	MRX6	P48564	524 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	NPY1	P53164	384 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	YGR021W	P53212	290 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	YNL108C	P53929	270 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	ERG5	P54781	538 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	CDC55	Q00362	526 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	IVY1	Q04934	453 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	HPF1	Q05164	967 aa		7.9	□□□□□ -1.14
NUP53	YMR153W	RPL40A	P0CH08	128 aa	Known RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	RPL40B	P0CH09	128 aa	Known RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	DBF4	P32325	704 aa		7.89	□□□□□ -1.15
NUP53	YMR153W	PXA2	P34230	853 aa		7.89	□□□□□ -1.15
NUP53	YMR153W	KAP104	P38217	918 aa	Known RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	HIS2	P38635	335 aa		7.89	□□□□□ -1.15
NUP53	YMR153W	SRP68	P38687	599 aa	Known RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	CRP1	P38845	465 aa	Known RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	DAN4	P47179	1161 aa		7.89	□□□□□ -1.15
NUP53	YMR153W	NUP84	P52891	726 aa		7.89	□□□□□ -1.15
NUP53	YMR153W	YNR063W	P53749	607 aa		7.89	□□□□□ -1.15
NUP53	YMR153W	TDA7	P53882	636 aa	Predicted RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	YNL040W	P53960	456 aa	Predicted RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	CLU1	Q03690	1277 aa	Known RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	JIP5	Q06214	492 aa	Predicted RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	CLP1	Q08685	445 aa	Predicted RBP	7.89	□□□□□ -1.15
NUP53	YMR153W	APL4	Q12028	832 aa		7.89	□□□□□ -1.15
NUP53	YMR153W	ADE3	P07245	946 aa	Known RBP	7.88	□□□□□ -1.15
NUP53	YMR153W	YJU3	P28321	313 aa		7.88	□□□□□ -1.15
NUP53	YMR153W	SET5	P38890	526 aa	Known RBP	7.88	□□□□□ -1.15
NUP53	YMR153W	SPC72	P39723	622 aa		7.88	□□□□□ -1.15
NUP53	YMR153W	STL1	P39932	569 aa		7.88	□□□□□ -1.15
NUP53	YMR153W	YJR061W	P40355	935 aa		7.88	□□□□□ -1.15
NUP53	YMR153W	SNG1	P46950	547 aa		7.88	□□□□□ -1.15
NUP53	YMR153W	AIM23	P47015	356 aa		7.88	□□□□□ -1.15
NUP53	YMR153W	AMA1	P50082	593 aa		7.88	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 76.2 ms