RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YER156CP40093 338 aaKnown RBP3.96□□□□□ -1.78
ECM16YMR128W NOG2P53742 486 aaKnown RBP3.96□□□□□ -1.78
ECM16YMR128W ESBP6P53918 673 aa3.96□□□□□ -1.78
ECM16YMR128W DIA2Q08496 732 aaPredicted RBP3.96□□□□□ -1.78
ECM16YMR128W ARP6Q12509 438 aa3.96□□□□□ -1.78
ECM16YMR128W SNA3P14359 133 aa3.96□□□□□ -1.78
ECM16YMR128W PAT1P25644 796 aaKnown RBP3.96□□□□□ -1.78
ECM16YMR128W SIN4P32259 974 aa3.96□□□□□ -1.78
ECM16YMR128W YMR134WP40207 237 aa3.96□□□□□ -1.78
ECM16YMR128W YGR125WP53273 1036 aa3.96□□□□□ -1.78
ECM16YMR128W UTP8P53276 713 aaKnown RBP3.96□□□□□ -1.78
ECM16YMR128W SHR3Q02774 210 aa3.96□□□□□ -1.78
ECM16YMR128W UFO1Q04511 668 aa3.96□□□□□ -1.78
ECM16YMR128W RSA3Q05942 220 aaKnown RBP3.96□□□□□ -1.78
ECM16YMR128W CDC19P00549 500 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W CDC33P07260 213 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W SPO16P17122 198 aa3.95□□□□□ -1.78
ECM16YMR128W CBF2P32504 956 aa3.95□□□□□ -1.78
ECM16YMR128W ATO2P32907 282 aa3.95□□□□□ -1.78
ECM16YMR128W TRM2P33753 639 aa3.95□□□□□ -1.78
ECM16YMR128W UBP11P36026 717 aa3.95□□□□□ -1.78
ECM16YMR128W RRN3P36070 627 aa3.95□□□□□ -1.78
ECM16YMR128W AIM20P40451 204 aa3.95□□□□□ -1.78
ECM16YMR128W TEL2P53038 688 aa3.95□□□□□ -1.78
ECM16YMR128W RTA1P53047 317 aa3.95□□□□□ -1.78
ECM16YMR128W RPM2Q02773 1202 aa3.95□□□□□ -1.78
ECM16YMR128W GLO4Q12320 285 aa3.95□□□□□ -1.78
ECM16YMR128W YML002WP0CF17 737 aa3.95□□□□□ -1.78
ECM16YMR128W AEP2P22136 580 aa3.95□□□□□ -1.78
ECM16YMR128W TOA1P32773 286 aa3.95□□□□□ -1.78
ECM16YMR128W SAK1P38990 1142 aa3.95□□□□□ -1.78
ECM16YMR128W XDJ1P39102 459 aa3.95□□□□□ -1.78
ECM16YMR128W SIP5P40210 489 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W MPH1P40562 993 aa3.95□□□□□ -1.78
ECM16YMR128W SEC27P41811 889 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W ROG3P43602 733 aa3.95□□□□□ -1.78
ECM16YMR128W FMS1P50264 508 aa3.95□□□□□ -1.78
ECM16YMR128W INP52P50942 1183 aa3.95□□□□□ -1.78
ECM16YMR128W GPG1P53130 126 aa3.95□□□□□ -1.78
ECM16YMR128W BIO4P53630 237 aa3.95□□□□□ -1.78
ECM16YMR128W BIO5P53744 561 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W YSH1Q06224 779 aaPredicted RBP3.95□□□□□ -1.78
ECM16YMR128W FAP7Q12055 197 aaPredicted RBP3.95□□□□□ -1.78
ECM16YMR128W RIF1P29539 1916 aa3.95□□□□□ -1.78
ECM16YMR128W TUB1P09733 447 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W VMA4P22203 233 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W KIP1P28742 1111 aa3.95□□□□□ -1.78
ECM16YMR128W MRF1P30775 413 aaPredicted RBP3.95□□□□□ -1.78
ECM16YMR128W DBF4P32325 704 aa3.95□□□□□ -1.78
ECM16YMR128W HES1P35843 434 aa3.95□□□□□ -1.78
ECM16YMR128W PDX3P38075 228 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W APM2P38700 605 aa3.95□□□□□ -1.78
ECM16YMR128W TRM5P38793 499 aa3.95□□□□□ -1.78
ECM16YMR128W GGA2P38817 585 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W LEM3P42838 414 aa3.95□□□□□ -1.78
ECM16YMR128W YGR016WP53209 190 aa3.95□□□□□ -1.78
ECM16YMR128W TIM8P57744 87 aa3.95□□□□□ -1.78
ECM16YMR128W HFD1Q04458 532 aa3.95□□□□□ -1.78
ECM16YMR128W ERV41Q04651 352 aa3.95□□□□□ -1.78
ECM16YMR128W MET7Q08645 548 aa3.95□□□□□ -1.78
ECM16YMR128W BUG1Q12191 341 aa3.95□□□□□ -1.78
ECM16YMR128W DBP10Q12389 995 aaKnown RBP3.95□□□□□ -1.78
ECM16YMR128W AAD3P25612 363 aa3.94□□□□□ -1.78
ECM16YMR128W RPC19P28000 142 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W LDH1P38139 375 aa3.94□□□□□ -1.78
ECM16YMR128W YHL008CP38750 627 aa3.94□□□□□ -1.78
ECM16YMR128W DYS1P38791 387 aa3.94□□□□□ -1.78
ECM16YMR128W VPS45P38932 577 aa3.94□□□□□ -1.78
ECM16YMR128W PES4P39684 611 aa3.94□□□□□ -1.78
ECM16YMR128W TAF6P53040 516 aa3.94□□□□□ -1.78
ECM16YMR128W COS6P53344 381 aa3.94□□□□□ -1.78
ECM16YMR128W GTB1Q04924 702 aa3.94□□□□□ -1.78
ECM16YMR128W NSE1Q07913 336 aa3.94□□□□□ -1.78
ECM16YMR128W YLR053CQ12026 108 aa3.94□□□□□ -1.78
ECM16YMR128W SSC1P0CS90 654 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W DAT1P13483 248 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W URE2P23202 354 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W PRP22P24384 1145 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W CDC48P25694 835 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W HBS1P32769 611 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W GYP6P32806 458 aa3.94□□□□□ -1.78
ECM16YMR128W SMF2P38778 549 aa3.94□□□□□ -1.78
ECM16YMR128W LIN1P38852 340 aaPredicted RBP3.94□□□□□ -1.78
ECM16YMR128W SPC97P38863 823 aa3.94□□□□□ -1.78
ECM16YMR128W DPH1P40487 425 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W YGR111WP53265 400 aa3.94□□□□□ -1.78
ECM16YMR128W YMR027WQ04371 470 aa3.94□□□□□ -1.78
ECM16YMR128W CDC20P26309 610 aa3.94□□□□□ -1.78
ECM16YMR128W SIP2P34164 415 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W KES1P35844 434 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W TOS1P38288 455 aa3.94□□□□□ -1.78
ECM16YMR128W JEM1P40358 645 aa3.94□□□□□ -1.78
ECM16YMR128W YJL045WP47052 634 aa3.94□□□□□ -1.78
ECM16YMR128W SAM37P50110 327 aa3.94□□□□□ -1.78
ECM16YMR128W CEF1Q03654 590 aaPredicted RBP3.94□□□□□ -1.78
ECM16YMR128W FMN1Q03778 218 aa3.94□□□□□ -1.78
ECM16YMR128W YET2Q04210 160 aa3.94□□□□□ -1.78
ECM16YMR128W ASA1Q06822 443 aa3.94□□□□□ -1.78
ECM16YMR128W YDL124WQ07551 312 aaKnown RBP3.94□□□□□ -1.78
ECM16YMR128W GRX6Q12438 231 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms