RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	YJR061W	P40355	935 aa		0.86	□□□□□ -2.27
RCO1	YMR075W	BUD17	P53727	317 aa		0.86	□□□□□ -2.27
RCO1	YMR075W	YNL144C	P53907	740 aa		0.86	□□□□□ -2.27
RCO1	YMR075W	VBA4	Q04602	768 aa	Known RBP	0.86	□□□□□ -2.27
RCO1	YMR075W	YDR338C	Q05497	695 aa		0.86	□□□□□ -2.27
RCO1	YMR075W	JIP5	Q06214	492 aa	Predicted RBP	0.86	□□□□□ -2.27
RCO1	YMR075W	GSH1	P32477	678 aa		0.85	□□□□□ -2.27
RCO1	YMR075W	YNL195C	P40168	261 aa		0.85	□□□□□ -2.27
RCO1	YMR075W	RAD26	P40352	1085 aa		0.85	□□□□□ -2.27
RCO1	YMR075W	YGL242C	P53066	181 aa		0.85	□□□□□ -2.27
RCO1	YMR075W	SNU56	Q03782	492 aa	Known RBP	0.85	□□□□□ -2.27
RCO1	YMR075W	PCL10	P53124	433 aa		0.85	□□□□□ -2.27
RCO1	YMR075W	ARP4	P80428	489 aa		0.85	□□□□□ -2.27
RCO1	YMR075W	TAF7	Q05021	590 aa		0.85	□□□□□ -2.27
RCO1	YMR075W	FMP25	Q08023	583 aa		0.85	□□□□□ -2.27
RCO1	YMR075W	ARE1	P25628	610 aa		0.84	□□□□□ -2.27
RCO1	YMR075W	HEM3	P28789	327 aa		0.84	□□□□□ -2.27
RCO1	YMR075W	YJL070C	P40361	888 aa		0.84	□□□□□ -2.27
RCO1	YMR075W	YPT11	P48559	417 aa		0.84	□□□□□ -2.27
RCO1	YMR075W	TDA5	Q06417	326 aa	Known RBP	0.84	□□□□□ -2.27
RCO1	YMR075W	RRP15	Q06511	250 aa	Predicted RBP	0.84	□□□□□ -2.27
RCO1	YMR075W	GSH2	Q08220	491 aa		0.84	□□□□□ -2.27
RCO1	YMR075W	AHA1	Q12449	350 aa	Known RBP	0.84	□□□□□ -2.27
RCO1	YMR075W	YKL069W	P36088	180 aa		0.84	□□□□□ -2.28
RCO1	YMR075W	VAC8	P39968	578 aa		0.84	□□□□□ -2.28
RCO1	YMR075W	YND1	P40009	630 aa		0.84	□□□□□ -2.28
RCO1	YMR075W	DIG1	Q03063	452 aa	Known RBP	0.84	□□□□□ -2.28
RCO1	YMR075W	HRD3	Q05787	833 aa		0.84	□□□□□ -2.28
RCO1	YMR075W	OSH2	Q12451	1283 aa		0.84	□□□□□ -2.28
RCO1	YMR075W	YFL068W	P0CX99	160 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	YLL066W-A	P0CY00	160 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	YLL067W-A	P0CY01	160 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	PMS1	P14242	873 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	SRO77	P38163	1010 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	AVT5	P38176	459 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	HUL4	P40985	892 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	CIR1	P42940	261 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	PFD1	P46988	109 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	CUL3	P53202	744 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	GPD1	Q00055	391 aa	Known RBP	0.83	□□□□□ -2.28
RCO1	YMR075W	MTD1	Q02046	320 aa	Known RBP	0.83	□□□□□ -2.28
RCO1	YMR075W	EFR3	Q03653	782 aa	Known RBP	0.83	□□□□□ -2.28
RCO1	YMR075W	COG8	Q04632	607 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	ECM22	Q05958	814 aa	Predicted RBP	0.83	□□□□□ -2.28
RCO1	YMR075W	UBX5	Q06682	500 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	ISA1	Q07821	250 aa	Predicted RBP	0.83	□□□□□ -2.28
RCO1	YMR075W	PPT2	Q12036	173 aa		0.83	□□□□□ -2.28
RCO1	YMR075W	RPS2	P25443	254 aa	Known RBP	0.82	□□□□□ -2.28
RCO1	YMR075W	NIC96	P34077	839 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	YKR018C	P36114	725 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	CCL1	P37366	393 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	FTH1	P38310	465 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	BIT61	P47041	543 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	ALD6	P54115	500 aa	Known RBP	0.82	□□□□□ -2.28
RCO1	YMR075W	PPN1	Q04119	674 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	TLG2	Q08144	397 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	YBR298C-A	Q8TGK4	73 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	BUD14	P27637	709 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	CAP1	P28495	268 aa	Known RBP	0.82	□□□□□ -2.28
RCO1	YMR075W	PET127	P32606	800 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	SPF1	P39986	1215 aa	Known RBP	0.82	□□□□□ -2.28
RCO1	YMR075W	PCL6	P40038	420 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	SAP4	P53036	818 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	FDC1	Q03034	503 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	NOP8	Q08287	484 aa	Predicted RBP	0.82	□□□□□ -2.28
RCO1	YMR075W	VHS3	Q08438	674 aa		0.82	□□□□□ -2.28
RCO1	YMR075W	GET3	Q12154	354 aa	Known RBP	0.82	□□□□□ -2.28
RCO1	YMR075W	PNO1	Q99216	274 aa	Known RBP	0.82	□□□□□ -2.28
RCO1	YMR075W	TMN3	P40071	706 aa		0.81	□□□□□ -2.28
RCO1	YMR075W	YOR389W	Q08912	624 aa		0.81	□□□□□ -2.28
RCO1	YMR075W	PIN2	Q12057	282 aa		0.81	□□□□□ -2.28
RCO1	YMR075W	RRI1	Q12468	440 aa		0.81	□□□□□ -2.28
RCO1	YMR075W	MTC6	P38849	526 aa		0.8	□□□□□ -2.28
RCO1	YMR075W	YHR218W	P38899	603 aa		0.8	□□□□□ -2.28
RCO1	YMR075W	YOR131C	Q12486	218 aa		0.8	□□□□□ -2.28
RCO1	YMR075W	FRS1	P15624	595 aa	Known RBP	0.8	□□□□□ -2.28
RCO1	YMR075W	CDC23	P16522	626 aa		0.8	□□□□□ -2.28
RCO1	YMR075W	CYK3	Q07533	885 aa		0.8	□□□□□ -2.28
RCO1	YMR075W	WRS1	Q12109	432 aa	Known RBP	0.8	□□□□□ -2.28
RCO1	YMR075W	Q0142	Q9ZZW4	58 aa		0.8	□□□□□ -2.28
RCO1	YMR075W	PCK1	P10963	549 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	HSP60	P19882	572 aa	Known RBP	0.79	□□□□□ -2.28
RCO1	YMR075W	CNA1	P23287	553 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	STE5	P32917	917 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	YKR075C	P36155	307 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	YBP1	P38315	674 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	RRP8	P38961	392 aa	Known RBP	0.79	□□□□□ -2.28
RCO1	YMR075W	TIM54	P47045	478 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	ECM16	Q04217	1267 aa	Known RBP	0.79	□□□□□ -2.28
RCO1	YMR075W	ECI1	Q05871	280 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	AAC1	P04710	309 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	SEC18	P18759	758 aa	Known RBP	0.79	□□□□□ -2.28
RCO1	YMR075W	YJU2	P28320	278 aa	Predicted RBP	0.79	□□□□□ -2.28
RCO1	YMR075W	RPL8B	P29453	256 aa	Known RBP	0.79	□□□□□ -2.28
RCO1	YMR075W	STO1	P34160	861 aa	Known RBP	0.79	□□□□□ -2.28
RCO1	YMR075W	YEL025C	P39991	1188 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	QRI7	P43122	407 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	YPI1	P43587	155 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	YGR125W	P53273	1036 aa		0.79	□□□□□ -2.28
RCO1	YMR075W	HLR1	Q04429	423 aa		0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms