RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	CHO2	P05374	869 aa	Known RBP	4.09	□□□□□ -1.75
YPT7	YML001W	SIR3	P06701	978 aa		4.09	□□□□□ -1.75
YPT7	YML001W	PET123	P17558	318 aa		4.09	□□□□□ -1.75
YPT7	YML001W	MGM1	P32266	881 aa		4.09	□□□□□ -1.75
YPT7	YML001W	HIR1	P32479	840 aa		4.09	□□□□□ -1.75
YPT7	YML001W	PPG1	P32838	368 aa		4.09	□□□□□ -1.75
YPT7	YML001W	SWE1	P32944	819 aa		4.09	□□□□□ -1.75
YPT7	YML001W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YPT7	YML001W	SPT8	P38915	602 aa		4.09	□□□□□ -1.75
YPT7	YML001W	BNA2	P47125	453 aa		4.09	□□□□□ -1.75
YPT7	YML001W	GAD1	Q04792	585 aa		4.09	□□□□□ -1.75
YPT7	YML001W	SPN1	Q06505	410 aa	Predicted RBP	4.09	□□□□□ -1.75
YPT7	YML001W	PSR2	Q07949	397 aa		4.09	□□□□□ -1.75
YPT7	YML001W	YPL150W	Q12152	901 aa		4.09	□□□□□ -1.75
YPT7	YML001W	BUG1	Q12191	341 aa		4.09	□□□□□ -1.75
YPT7	YML001W	SUT2	Q12286	268 aa		4.09	□□□□□ -1.75
YPT7	YML001W	NBL1	Q3E7Y6	73 aa		4.09	□□□□□ -1.75
YPT7	YML001W	DDP1	Q99321	188 aa	Known RBP	4.09	□□□□□ -1.75
YPT7	YML001W	POM152	P39685	1337 aa		4.09	□□□□□ -1.75
YPT7	YML001W	CDC9	P04819	755 aa		4.08	□□□□□ -1.76
YPT7	YML001W	PIF1	P07271	859 aa		4.08	□□□□□ -1.76
YPT7	YML001W	COQ1	P18900	473 aa		4.08	□□□□□ -1.76
YPT7	YML001W	ADE2	P21264	571 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	MIH1	P23748	554 aa		4.08	□□□□□ -1.76
YPT7	YML001W	MEF1	P25039	761 aa		4.08	□□□□□ -1.76
YPT7	YML001W	MCM4	P30665	933 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	FRD1	P32614	470 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	STO1	P34160	861 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	PTK1	P36002	662 aa	Predicted RBP	4.08	□□□□□ -1.76
YPT7	YML001W	YKT6	P36015	200 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	GRX7	P38068	203 aa		4.08	□□□□□ -1.76
YPT7	YML001W	CCT3	P39077	534 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	ATF1	P40353	525 aa		4.08	□□□□□ -1.76
YPT7	YML001W	CAF16	P43569	289 aa		4.08	□□□□□ -1.76
YPT7	YML001W	YPT11	P48559	417 aa		4.08	□□□□□ -1.76
YPT7	YML001W	PRP31	P49704	494 aa	Predicted RBP	4.08	□□□□□ -1.76
YPT7	YML001W	RPT4	P53549	437 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	WAR1	Q03631	944 aa		4.08	□□□□□ -1.76
YPT7	YML001W	EIS1	Q05050	843 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	IRC3	Q06683	689 aa		4.08	□□□□□ -1.76
YPT7	YML001W	RIX7	Q07844	837 aa	Known RBP	4.08	□□□□□ -1.76
YPT7	YML001W	ADR1	P07248	1323 aa		4.07	□□□□□ -1.76
YPT7	YML001W	SAC3	P46674	1301 aa		4.07	□□□□□ -1.76
YPT7	YML001W	CIT2	P08679	460 aa		4.07	□□□□□ -1.76
YPT7	YML001W	VPS1	P21576	704 aa	Known RBP	4.07	□□□□□ -1.76
YPT7	YML001W	GSY2	P27472	705 aa		4.07	□□□□□ -1.76
YPT7	YML001W	TOA1	P32773	286 aa		4.07	□□□□□ -1.76
YPT7	YML001W	HIS7	P33734	552 aa	Known RBP	4.07	□□□□□ -1.76
YPT7	YML001W	YHR112C	P38716	378 aa		4.07	□□□□□ -1.76
YPT7	YML001W	MIP6	P38760	659 aa	Known RBP	4.07	□□□□□ -1.76
YPT7	YML001W	CRG1	P38892	291 aa	RIP-Chip data	4.07	□□□□□ -1.76	not detected
YPT7	YML001W	LYS9	P38999	446 aa		4.07	□□□□□ -1.76
YPT7	YML001W	NUP82	P40368	713 aa		4.07	□□□□□ -1.76
YPT7	YML001W	GSM1	P42950	618 aa		4.07	□□□□□ -1.76
YPT7	YML001W	RNH70	P53331	553 aa		4.07	□□□□□ -1.76
YPT7	YML001W	SMX3	P54999	86 aa	Predicted RBP	4.07	□□□□□ -1.76
YPT7	YML001W	SNP1	Q00916	300 aa	Predicted RBP	4.07	□□□□□ -1.76
YPT7	YML001W	ARG5,6	Q01217	863 aa		4.07	□□□□□ -1.76
YPT7	YML001W	YML122C	Q03207	126 aa		4.07	□□□□□ -1.76
YPT7	YML001W	MCM21	Q06675	368 aa		4.07	□□□□□ -1.76
YPT7	YML001W	AFT2	Q08957	416 aa		4.07	□□□□□ -1.76
YPT7	YML001W	PGI1	P12709	554 aa	Known RBP	4.06	□□□□□ -1.76
YPT7	YML001W	RIT1	P23796	513 aa		4.06	□□□□□ -1.76
YPT7	YML001W	RTT107	P38850	1070 aa		4.06	□□□□□ -1.76
YPT7	YML001W	MTL1	P53214	551 aa		4.06	□□□□□ -1.76
YPT7	YML001W	RPS15	Q01855	142 aa	Known RBP	4.06	□□□□□ -1.76
YPT7	YML001W	IRC4	Q03036	179 aa		4.06	□□□□□ -1.76
YPT7	YML001W	HMO1	Q03973	246 aa	Known RBP	4.06	□□□□□ -1.76
YPT7	YML001W	HCR1	Q05775	265 aa	Known RBP	4.06	□□□□□ -1.76
YPT7	YML001W	YLR407W	Q06070	228 aa		4.06	□□□□□ -1.76
YPT7	YML001W	SMD2	Q06217	110 aa	Known RBP	4.06	□□□□□ -1.76
YPT7	YML001W	TFC6	Q06339	672 aa		4.06	□□□□□ -1.76
YPT7	YML001W	TLG2	Q08144	397 aa		4.06	□□□□□ -1.76
YPT7	YML001W	TMA16	Q08687	178 aa		4.06	□□□□□ -1.76
YPT7	YML001W	APL4	Q12028	832 aa		4.06	□□□□□ -1.76
YPT7	YML001W	YLR125W	Q12138	136 aa		4.06	□□□□□ -1.76
YPT7	YML001W	GET3	Q12154	354 aa	Known RBP	4.06	□□□□□ -1.76
YPT7	YML001W	YOR111W	Q99210	232 aa		4.06	□□□□□ -1.76
YPT7	YML001W	Q0142	Q9ZZW4	58 aa		4.06	□□□□□ -1.76
YPT7	YML001W	FAS2	P19097	1887 aa	Known RBP	4.06	□□□□□ -1.76
YPT7	YML001W	PMD1	P32634	1753 aa		4.05	□□□□□ -1.76
YPT7	YML001W	TUF1	P02992	437 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	CDC37	P06101	506 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	SWI4	P25302	1093 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	MSH2	P25847	964 aa		4.05	□□□□□ -1.76
YPT7	YML001W	SEC65	P29478	273 aa		4.05	□□□□□ -1.76
YPT7	YML001W	ANP1	P32629	500 aa		4.05	□□□□□ -1.76
YPT7	YML001W	MPE1	P35728	441 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	PSY4	P38193	441 aa		4.05	□□□□□ -1.76
YPT7	YML001W	FMO1	P38866	432 aa		4.05	□□□□□ -1.76
YPT7	YML001W	NPR2	P39923	615 aa		4.05	□□□□□ -1.76
YPT7	YML001W	GID8	P40208	455 aa		4.05	□□□□□ -1.76
YPT7	YML001W	CSM2	P40465	213 aa		4.05	□□□□□ -1.76
YPT7	YML001W	YFL052W	P43551	465 aa		4.05	□□□□□ -1.76
YPT7	YML001W	TAH11	P47112	604 aa		4.05	□□□□□ -1.76
YPT7	YML001W	LYS4	P49367	693 aa	Predicted RBP	4.05	□□□□□ -1.76
YPT7	YML001W	APT1	P49435	187 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	PIP2	P52960	996 aa		4.05	□□□□□ -1.76
YPT7	YML001W	VPS73	P53142	486 aa	Known RBP	4.05	□□□□□ -1.76
YPT7	YML001W	YAP1802	P53309	568 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms