RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C PMT7Q06644 662 aa10.83□□□□□ -0.68
SHM2YLR058C NDJ1Q12366 352 aa10.83□□□□□ -0.68
SHM2YLR058C NOP58Q12499 511 aaKnown RBP10.83□□□□□ -0.68
SHM2YLR058C YIH1P25637 258 aa10.82□□□□□ -0.68
SHM2YLR058C GPI10P30777 616 aa10.82□□□□□ -0.68
SHM2YLR058C HSP78P33416 811 aa10.82□□□□□ -0.68
SHM2YLR058C LAS1P36146 502 aaPredicted RBP10.82□□□□□ -0.68
SHM2YLR058C VHC1P38329 1120 aa10.82□□□□□ -0.68
SHM2YLR058C SFB3P38810 929 aa10.82□□□□□ -0.68
SHM2YLR058C PRM9P39551 298 aa10.82□□□□□ -0.68
SHM2YLR058C BTT1P40314 149 aaPredicted RBP10.82□□□□□ -0.68
SHM2YLR058C MIC19P43594 170 aa10.82□□□□□ -0.68
SHM2YLR058C ATG36P46983 293 aa10.82□□□□□ -0.68
SHM2YLR058C UTP8P53276 713 aaKnown RBP10.82□□□□□ -0.68
SHM2YLR058C RPL22BP56628 122 aaKnown RBP10.82□□□□□ -0.68
SHM2YLR058C PIG1Q06216 648 aa10.82□□□□□ -0.68
SHM2YLR058C TPO1Q07824 586 aa10.82□□□□□ -0.68
SHM2YLR058C ACM1Q08981 209 aa10.82□□□□□ -0.68
SHM2YLR058C FAP7Q12055 197 aaPredicted RBP10.82□□□□□ -0.68
SHM2YLR058C SPE3Q12074 293 aaKnown RBP10.82□□□□□ -0.68
SHM2YLR058C PUF2Q12221 1075 aaKnown RBP RIP-Chip data10.82□□□□□ -0.68not detected
SHM2YLR058C SAF1P38352 637 aa10.81□□□□□ -0.68
SHM2YLR058C FSH1P38777 243 aaKnown RBP10.81□□□□□ -0.68
SHM2YLR058C RRT5P43607 289 aa10.81□□□□□ -0.68
SHM2YLR058C HLJ1P48353 224 aa10.81□□□□□ -0.68
SHM2YLR058C ARA2Q04212 335 aa10.81□□□□□ -0.68
SHM2YLR058C YDL073WQ07454 984 aa10.81□□□□□ -0.68
SHM2YLR058C MET16P18408 261 aaPredicted RBP10.8□□□□□ -0.68
SHM2YLR058C POP4P38336 279 aa10.8□□□□□ -0.68
SHM2YLR058C LAM1P38851 1228 aa10.8□□□□□ -0.68
SHM2YLR058C AIM18P38884 321 aa10.8□□□□□ -0.68
SHM2YLR058C RGD2P43556 714 aa10.8□□□□□ -0.68
SHM2YLR058C RFX1P48743 811 aa10.8□□□□□ -0.68
SHM2YLR058C YPQ1Q12010 308 aa10.8□□□□□ -0.68
SHM2YLR058C YML002WP0CF17 737 aa10.79□□□□□ -0.68
SHM2YLR058C HMG2P12684 1045 aa10.79□□□□□ -0.68
SHM2YLR058C PLC1P32383 869 aa10.79□□□□□ -0.68
SHM2YLR058C NFU1P32860 256 aa10.79□□□□□ -0.68
SHM2YLR058C ECM13P38195 257 aa10.79□□□□□ -0.68
SHM2YLR058C NUP60P39705 539 aa10.79□□□□□ -0.68
SHM2YLR058C RSM26P47141 266 aa10.79□□□□□ -0.68
SHM2YLR058C BSP1Q06604 576 aa10.79□□□□□ -0.68
SHM2YLR058C LPX1Q12405 387 aaKnown RBP10.79□□□□□ -0.68
SHM2YLR058C YDR034W-BQ6Q5X2 51 aa10.79□□□□□ -0.68
SHM2YLR058C CDC24P11433 854 aaPredicted RBP10.78□□□□□ -0.68
SHM2YLR058C PEP5P12868 1029 aa10.78□□□□□ -0.68
SHM2YLR058C AIM26P32858 118 aa10.78□□□□□ -0.68
SHM2YLR058C DIA4P38705 446 aaPredicted RBP10.78□□□□□ -0.68
SHM2YLR058C MNN11P46985 422 aaKnown RBP10.78□□□□□ -0.68
SHM2YLR058C PSP1P50896 841 aaKnown RBP10.78□□□□□ -0.68
SHM2YLR058C YVH1Q02256 364 aaKnown RBP10.78□□□□□ -0.68
SHM2YLR058C PIR3Q03180 325 aa10.78□□□□□ -0.68
SHM2YLR058C YLL056CQ12177 298 aa10.78□□□□□ -0.68
SHM2YLR058C SVS1Q12254 260 aa10.78□□□□□ -0.68
SHM2YLR058C GPM3Q12326 303 aa10.78□□□□□ -0.68
SHM2YLR058C GCR1P07261 785 aa10.77□□□□□ -0.68
SHM2YLR058C MTF1P14908 341 aaKnown RBP10.77□□□□□ -0.68
SHM2YLR058C SPO16P17122 198 aa10.77□□□□□ -0.68
SHM2YLR058C ISF1P32488 338 aa10.77□□□□□ -0.68
SHM2YLR058C DUG2P38149 878 aa10.77□□□□□ -0.68
SHM2YLR058C SPP381P38282 291 aaPredicted RBP10.77□□□□□ -0.68
SHM2YLR058C PEX28P38848 579 aa10.77□□□□□ -0.68
SHM2YLR058C STL1P39932 569 aa10.77□□□□□ -0.68
SHM2YLR058C COP1P53622 1201 aaKnown RBP10.77□□□□□ -0.68
SHM2YLR058C NMA111P53920 997 aa10.77□□□□□ -0.68
SHM2YLR058C RRD2Q12461 358 aa10.77□□□□□ -0.68
SHM2YLR058C ENO2P00925 437 aaKnown RBP10.76□□□□□ -0.69
SHM2YLR058C CBF1P17106 351 aa10.76□□□□□ -0.69
SHM2YLR058C BIT2P38346 545 aa10.76□□□□□ -0.69
SHM2YLR058C EDC3P39998 551 aaKnown RBP10.76□□□□□ -0.69
SHM2YLR058C INA22P40576 216 aa10.76□□□□□ -0.69
SHM2YLR058C CNN1P43618 361 aa10.76□□□□□ -0.69
SHM2YLR058C RTT101P47050 842 aa10.76□□□□□ -0.69
SHM2YLR058C YGR127WP53275 312 aa10.76□□□□□ -0.69
SHM2YLR058C VPS9P54787 451 aa10.76□□□□□ -0.69
SHM2YLR058C CDC73Q06697 393 aa10.76□□□□□ -0.69
SHM2YLR058C AVL9Q12500 764 aa10.76□□□□□ -0.69
SHM2YLR058C EFG1Q3E705 233 aaKnown RBP10.76□□□□□ -0.69
SHM2YLR058C HIS1P00498 297 aaKnown RBP10.75□□□□□ -0.69
SHM2YLR058C APE1P14904 514 aa10.75□□□□□ -0.69
SHM2YLR058C PEX34P25584 144 aa10.75□□□□□ -0.69
SHM2YLR058C MGT1P26188 188 aa10.75□□□□□ -0.69
SHM2YLR058C COQ8P27697 501 aa10.75□□□□□ -0.69
SHM2YLR058C LTV1P34078 463 aa10.75□□□□□ -0.69
SHM2YLR058C URA8P38627 578 aaPredicted RBP10.75□□□□□ -0.69
SHM2YLR058C CKB2P38930 258 aa10.75□□□□□ -0.69
SHM2YLR058C MOB1P40484 314 aa10.75□□□□□ -0.69
SHM2YLR058C MND2P40577 368 aa10.75□□□□□ -0.69
SHM2YLR058C SNG1P46950 547 aa10.75□□□□□ -0.69
SHM2YLR058C CBC2Q08920 208 aaKnown RBP RIP-Chip data10.75□□□□□ -0.69not detected
SHM2YLR058C SEY1Q99287 776 aa10.75□□□□□ -0.69
SHM2YLR058C ADY2P25613 283 aa10.75□□□□□ -0.69
SHM2YLR058C RAD5P32849 1169 aaPredicted RBP10.75□□□□□ -0.69
SHM2YLR058C OTU2P38747 307 aaKnown RBP10.75□□□□□ -0.69
SHM2YLR058C YEL028WP39989 153 aa10.75□□□□□ -0.69
SHM2YLR058C MVP1P40959 511 aaKnown RBP10.75□□□□□ -0.69
SHM2YLR058C UFE1P41834 346 aa10.75□□□□□ -0.69
SHM2YLR058C TCB2P48231 1178 aa10.75□□□□□ -0.69
SHM2YLR058C COQ6P53318 479 aa10.75□□□□□ -0.69
SHM2YLR058C GRX8Q05926 109 aa10.75□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms