RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	CHS1	P08004	1131 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	SEC21	P32074	935 aa	Known RBP	5.1	□□□□□ -1.59
DOA1	YKL213C	AGP2	P38090	596 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	YHR202W	P38887	602 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	XDJ1	P39102	459 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	TMN3	P40071	706 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	ZAP1	P47043	880 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	STP1	Q00947	519 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
DOA1	YKL213C	VPS60	Q03390	229 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	TIF35	Q04067	274 aa	Known RBP	5.1	□□□□□ -1.59
DOA1	YKL213C	YMR018W	Q04364	514 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	SDH5	Q08230	162 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	CIR2	Q08822	631 aa		5.1	□□□□□ -1.59
DOA1	YKL213C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
DOA1	YKL213C	RKM1	Q08961	583 aa	Predicted RBP	5.1	□□□□□ -1.59
DOA1	YKL213C	PKH2	Q12236	1081 aa	Known RBP	5.1	□□□□□ -1.59
DOA1	YKL213C	RPS3	P05750	240 aa	Known RBP	5.09	□□□□□ -1.59
DOA1	YKL213C	MPH2	P0CD99	609 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	VPS3	P23643	1011 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	RAD57	P25301	460 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	EXO5	P38289	585 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	RIM11	P38615	370 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	CCC2	P38995	1004 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	MET12	P46151	657 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	NUP84	P52891	726 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	SPC98	P53540	846 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	SPC19	Q03954	165 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	UTP13	Q05946	817 aa	Known RBP	5.09	□□□□□ -1.59
DOA1	YKL213C	REC8	Q12188	680 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	TEF1	P02994	458 aa	Known RBP	5.09	□□□□□ -1.59
DOA1	YKL213C	HAP2	P06774	265 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	RRP1	P35178	278 aa	Predicted RBP	5.09	□□□□□ -1.59
DOA1	YKL213C	MIA40	P36046	403 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	OLA1	P38219	394 aa	Known RBP	5.09	□□□□□ -1.59
DOA1	YKL213C	APM2	P38700	605 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	RET2	P43621	546 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	PHO86	P46956	311 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	POL31	P46957	487 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	YJR054W	P47114	497 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	SPP1	Q03012	353 aa		5.09	□□□□□ -1.59
DOA1	YKL213C	BRX1	Q08235	291 aa	Known RBP	5.09	□□□□□ -1.59
DOA1	YKL213C	GAL80	P04387	435 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	TPK1	P06244	397 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	YER152C	P10356	443 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	KSS1	P14681	368 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	KIP2	P28743	706 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	PLC1	P32383	869 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	HXT1	P32465	570 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	PXA2	P34230	853 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	MTC2	P34246	357 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	GCS1	P35197	352 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	NUP120	P35729	1037 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	YKL050C	P35736	922 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	MCX1	P38323	520 aa	Predicted RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	SET5	P38890	526 aa	Known RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	GEM1	P39722	662 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	YEL023C	P39992	682 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	MMF1	P40185	145 aa	Known RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	SIP5	P40210	489 aa	Known RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	YTA12	P40341	825 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	EFM4	P40516	257 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	TRF5	P48561	642 aa	Known RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	MZM1	Q03429	123 aa	Predicted RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	SOV1	Q04748	898 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	ALR1	Q08269	859 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	DAS2	Q12084	232 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	MCD1	Q12158	566 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	GAL1	P04385	528 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	ITR1	P30605	584 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	ECM32	P32644	1121 aa	Known RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	PEX6	P33760	1030 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	NOP4	P37838	685 aa	Known RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	YMC2	P38087	329 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	POP2	P39008	433 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	RIO2	P40160	425 aa	Known RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	YJL070C	P40361	888 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	YIR016W	P40572	265 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	STU2	P46675	888 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	APT1	P49435	187 aa	Known RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	PUS2	P53167	370 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	YGL036W	P53185	909 aa	Predicted RBP	5.08	□□□□□ -1.6
DOA1	YKL213C	SPO20	Q04359	397 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	PIG1	Q06216	648 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	YLR001C	Q07895	862 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	TAF3	Q12297	353 aa		5.08	□□□□□ -1.6
DOA1	YKL213C	SAT4	P25333	603 aa	Known RBP	5.07	□□□□□ -1.6
DOA1	YKL213C	VBA3	P25594	458 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	GAC1	P28006	793 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	NTG1	P31378	399 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	FRE1	P32791	686 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	SLA2	P33338	968 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	MRP8	P35719	219 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	SET3	P36124	751 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	VBA5	P36172	582 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	HMT1	P38074	348 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	SHE3	P38272	425 aa	Known RBP	5.07	□□□□□ -1.6
DOA1	YKL213C	TCD1	P38756	429 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	DSE1	P40077	573 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	IML2	P47031	731 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms