RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	DUG1	P43616	481 aa	Known RBP	4.09	□□□□□ -1.75
SDS22	YKL193C	RNR4	P49723	345 aa	Known RBP	4.09	□□□□□ -1.75
SDS22	YKL193C	YGL117W	P53133	265 aa		4.09	□□□□□ -1.75
SDS22	YKL193C	YPR027C	Q12079	277 aa		4.09	□□□□□ -1.75
SDS22	YKL193C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SDS22	YKL193C	RMP1	Q12530	201 aa		4.09	□□□□□ -1.75
SDS22	YKL193C	ATP12	P22135	325 aa		4.08	□□□□□ -1.76
SDS22	YKL193C	HLR1	Q04429	423 aa		4.08	□□□□□ -1.76
SDS22	YKL193C	ORM2	Q06144	216 aa		4.08	□□□□□ -1.76
SDS22	YKL193C	TSR4	P25040	408 aa		4.07	□□□□□ -1.76
SDS22	YKL193C	BEM3	P32873	1128 aa		4.07	□□□□□ -1.76
SDS22	YKL193C	MRPL7	P36519	292 aa		4.07	□□□□□ -1.76
SDS22	YKL193C	NIT2	P47016	307 aa		4.07	□□□□□ -1.76
SDS22	YKL193C	ENP2	P48234	707 aa	Known RBP	4.07	□□□□□ -1.76
SDS22	YKL193C	YGR054W	P53235	642 aa	Known RBP	4.07	□□□□□ -1.76
SDS22	YKL193C	SKY1	Q03656	742 aa		4.07	□□□□□ -1.76
SDS22	YKL193C	YCG1	Q06680	1035 aa		4.07	□□□□□ -1.76
SDS22	YKL193C	NGL1	Q08213	363 aa	Known RBP	4.07	□□□□□ -1.76
SDS22	YKL193C	TRE2	Q08693	809 aa		4.07	□□□□□ -1.76
SDS22	YKL193C	NEW1	Q08972	1196 aa	Known RBP	4.07	□□□□□ -1.76
SDS22	YKL193C	TMA17	Q12513	150 aa		4.07	□□□□□ -1.76
SDS22	YKL193C	NOP1	P15646	327 aa	Known RBP	4.06	□□□□□ -1.76
SDS22	YKL193C	AEP2	P22136	580 aa		4.06	□□□□□ -1.76
SDS22	YKL193C	DGR2	P32330	852 aa		4.06	□□□□□ -1.76
SDS22	YKL193C	PXL1	P36166	706 aa		4.06	□□□□□ -1.76
SDS22	YKL193C	EHT1	P38295	451 aa		4.06	□□□□□ -1.76
SDS22	YKL193C	MAF1	P41910	395 aa		4.06	□□□□□ -1.76
SDS22	YKL193C	YJR120W	P47157	116 aa		4.06	□□□□□ -1.76
SDS22	YKL193C	YDL183C	P48569	320 aa		4.06	□□□□□ -1.76
SDS22	YKL193C	SCW4	P53334	386 aa	Known RBP	4.06	□□□□□ -1.76
SDS22	YKL193C	HMG2	P12684	1045 aa		4.05	□□□□□ -1.76
SDS22	YKL193C	YBR071W	P38243	211 aa		4.05	□□□□□ -1.76
SDS22	YKL193C	PPE1	P38796	400 aa		4.05	□□□□□ -1.76
SDS22	YKL193C	CCT4	P39078	528 aa	Known RBP	4.05	□□□□□ -1.76
SDS22	YKL193C	ATP23	P53722	227 aa		4.05	□□□□□ -1.76
SDS22	YKL193C	NGL2	Q03264	515 aa	Known RBP	4.05	□□□□□ -1.76
SDS22	YKL193C	EFR3	Q03653	782 aa	Known RBP	4.05	□□□□□ -1.76
SDS22	YKL193C	TRS23	Q03784	219 aa		4.05	□□□□□ -1.76
SDS22	YKL193C	PRS5	Q12265	496 aa	Known RBP	4.05	□□□□□ -1.76
SDS22	YKL193C	YIP4	P53093	235 aa		4.04	□□□□□ -1.76
SDS22	YKL193C	DAK1	P54838	584 aa	Known RBP	4.04	□□□□□ -1.76
SDS22	YKL193C	MFM1	Q02783	413 aa		4.04	□□□□□ -1.76
SDS22	YKL193C	AIM41	Q12032	185 aa		4.04	□□□□□ -1.76
SDS22	YKL193C	RMA1	P36001	430 aa	Known RBP	4.03	□□□□□ -1.76
SDS22	YKL193C	ENP1	P38333	483 aa	Known RBP	4.03	□□□□□ -1.76
SDS22	YKL193C	SRP68	P38687	599 aa	Known RBP	4.03	□□□□□ -1.76
SDS22	YKL193C	PEA2	P40091	420 aa		4.03	□□□□□ -1.76
SDS22	YKL193C	IRC5	P43610	853 aa		4.03	□□□□□ -1.76
SDS22	YKL193C	NMD5	P46970	1048 aa		4.03	□□□□□ -1.76
SDS22	YKL193C	CPR8	P53728	308 aa		4.03	□□□□□ -1.76
SDS22	YKL193C	COG6	P53959	839 aa		4.03	□□□□□ -1.76
SDS22	YKL193C	YEL076C-A	P0CX16	216 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	YLR464W	P0CX17	216 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	COX11	P19516	300 aa	Known RBP	4.02	□□□□□ -1.77
SDS22	YKL193C	HOP1	P20050	605 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	YEL076C	P39971	216 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	YEL025C	P39991	1188 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	EAF5	P39995	279 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	LRO1	P40345	661 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	SPC105	P53148	917 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	BUD17	P53727	317 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	SQS1	P53866	767 aa	Known RBP	4.02	□□□□□ -1.77
SDS22	YKL193C	MTD1	Q02046	320 aa	Known RBP	4.02	□□□□□ -1.77
SDS22	YKL193C	CEF1	Q03654	590 aa	Predicted RBP	4.02	□□□□□ -1.77
SDS22	YKL193C	ECM38	Q05902	660 aa	Predicted RBP	4.02	□□□□□ -1.77
SDS22	YKL193C	ARR3	Q06598	404 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	IRC3	Q06683	689 aa		4.02	□□□□□ -1.77
SDS22	YKL193C	ASK1	P35734	292 aa		4.01	□□□□□ -1.77
SDS22	YKL193C	DHR2	P36009	735 aa	Predicted RBP	4.01	□□□□□ -1.77
SDS22	YKL193C	PAF1	P38351	445 aa		4.01	□□□□□ -1.77
SDS22	YKL193C	THI6	P41835	540 aa		4.01	□□□□□ -1.77
SDS22	YKL193C	PEF1	P53238	335 aa		4.01	□□□□□ -1.77
SDS22	YKL193C	RPS15	Q01855	142 aa	Known RBP	4.01	□□□□□ -1.77
SDS22	YKL193C	RSC9	Q03124	581 aa		4.01	□□□□□ -1.77
SDS22	YKL193C	CWC2	Q12046	339 aa	Predicted RBP	4.01	□□□□□ -1.77
SDS22	YKL193C	CNE1	P27825	502 aa		4	□□□□□ -1.77
SDS22	YKL193C	HEM12	P32347	362 aa	Predicted RBP	4	□□□□□ -1.77
SDS22	YKL193C	GCS1	P35197	352 aa		4	□□□□□ -1.77
SDS22	YKL193C	RIM4	P38741	713 aa		4	□□□□□ -1.77
SDS22	YKL193C	PCI8	P40512	444 aa		4	□□□□□ -1.77
SDS22	YKL193C	SLD3	P53135	668 aa		4	□□□□□ -1.77
SDS22	YKL193C	YOR378W	Q08902	515 aa		4	□□□□□ -1.77
SDS22	YKL193C	YPL216W	Q08964	1102 aa		4	□□□□□ -1.77
SDS22	YKL193C	VPS5	Q92331	675 aa		4	□□□□□ -1.77
SDS22	YKL193C	TUF1	P02992	437 aa	Known RBP	3.99	□□□□□ -1.77
SDS22	YKL193C	PMA2	P19657	947 aa		3.99	□□□□□ -1.77
SDS22	YKL193C	VPS33	P20795	691 aa		3.99	□□□□□ -1.77
SDS22	YKL193C	PLC1	P32383	869 aa		3.99	□□□□□ -1.77
SDS22	YKL193C	TFC4	P33339	1025 aa		3.99	□□□□□ -1.77
SDS22	YKL193C	PIH1	P38768	344 aa		3.99	□□□□□ -1.77
SDS22	YKL193C	MNT2	P53059	558 aa		3.99	□□□□□ -1.77
SDS22	YKL193C	ERG13	P54839	491 aa	Known RBP	3.99	□□□□□ -1.77
SDS22	YKL193C	PEX15	Q08215	383 aa		3.99	□□□□□ -1.77
SDS22	YKL193C	ZPS1	Q12512	249 aa		3.99	□□□□□ -1.77
SDS22	YKL193C	SSB1	P11484	613 aa	Known RBP	3.98	□□□□□ -1.77
SDS22	YKL193C	KAR1	P11927	433 aa		3.98	□□□□□ -1.77
SDS22	YKL193C	CWH43	P25618	953 aa		3.98	□□□□□ -1.77
SDS22	YKL193C	CAP1	P28495	268 aa	Known RBP	3.98	□□□□□ -1.77
SDS22	YKL193C	YJL193W	P39542	402 aa		3.98	□□□□□ -1.77
SDS22	YKL193C	SSB2	P40150	613 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 139.4 ms