RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeast

Gene RPL39, Length 156 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL39	YJL189W	TFB2	Q02939	513 aa		2.63	□□□□□ -1.99
RPL39	YJL189W	WAR1	Q03631	944 aa		2.63	□□□□□ -1.99
RPL39	YJL189W	YMR084W	A2P2R3	262 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	YER190C-B	P0CX94	160 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	YEL077W-A	P0CX95	160 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	YGR296C-B	P0CX96	160 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	YPL283W-B	P0CX97	160 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	YPR204C-A	P0CX98	160 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	TDA3	P38758	523 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	SPC97	P38863	823 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	CEF1	Q03654	590 aa	Predicted RBP	2.62	□□□□□ -1.99
RPL39	YJL189W	TPO3	Q06451	622 aa		2.62	□□□□□ -1.99
RPL39	YJL189W	HOP1	P20050	605 aa		2.61	□□□□□ -1.99
RPL39	YJL189W	YEL025C	P39991	1188 aa		2.61	□□□□□ -1.99
RPL39	YJL189W	YPL071C	Q02864	156 aa		2.61	□□□□□ -1.99
RPL39	YJL189W	PPN1	Q04119	674 aa		2.61	□□□□□ -1.99
RPL39	YJL189W	ARR3	Q06598	404 aa		2.61	□□□□□ -1.99
RPL39	YJL189W	SEC65	P29478	273 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	MTC7	P32633	139 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	YHR033W	P38690	423 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	CCT4	P39078	528 aa	Known RBP	2.6	□□□□□ -1.99
RPL39	YJL189W	TDA10	P42938	290 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	IES1	P43579	692 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	RET2	P43621	546 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	YDL183C	P48569	320 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	GFD1	Q04839	188 aa	Known RBP	2.6	□□□□□ -1.99
RPL39	YJL189W	HRD3	Q05787	833 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	SNA4	Q07549	140 aa		2.6	□□□□□ -1.99
RPL39	YJL189W	YPT1	P01123	206 aa	Known RBP	2.59	□□□□□ -1.99
RPL39	YJL189W	NOP1	P15646	327 aa	Known RBP	2.59	□□□□□ -1.99
RPL39	YJL189W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
RPL39	YJL189W	YJU2	P28320	278 aa	Predicted RBP	2.59	□□□□□ -1.99
RPL39	YJL189W	MGM1	P32266	881 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	DHR2	P36009	735 aa	Predicted RBP	2.59	□□□□□ -1.99
RPL39	YJL189W	CCL1	P37366	393 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	BRN1	P38170	754 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	FAT1	P38225	669 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	OCA5	P38738	679 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	YMR124W	P39523	943 aa	Known RBP	2.59	□□□□□ -1.99
RPL39	YJL189W	OAF1	P39720	1047 aa	Predicted RBP	2.59	□□□□□ -1.99
RPL39	YJL189W	LRO1	P40345	661 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	YJR096W	P47137	282 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	LYS20	P48570	428 aa	Known RBP	2.59	□□□□□ -1.99
RPL39	YJL189W	NUP53	Q03790	475 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	YCG1	Q06680	1035 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	NDD1	Q08887	554 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	TGS1	Q12052	315 aa		2.59	□□□□□ -1.99
RPL39	YJL189W	YPK1	P12688	680 aa	Known RBP	2.58	□□□□□ -2
RPL39	YJL189W	YCP4	P25349	247 aa	Known RBP	2.58	□□□□□ -2
RPL39	YJL189W	CAP1	P28495	268 aa	Known RBP	2.58	□□□□□ -2
RPL39	YJL189W	LOT5	P34234	306 aa		2.58	□□□□□ -2
RPL39	YJL189W	HXT6	P39003	570 aa	Known RBP	2.58	□□□□□ -2
RPL39	YJL189W	HXT7	P39004	570 aa		2.58	□□□□□ -2
RPL39	YJL189W	MGS1	P40151	587 aa		2.58	□□□□□ -2
RPL39	YJL189W	COP1	P53622	1201 aa	Known RBP	2.58	□□□□□ -2
RPL39	YJL189W	USA1	Q03714	838 aa		2.58	□□□□□ -2
RPL39	YJL189W	HLR1	Q04429	423 aa		2.58	□□□□□ -2
RPL39	YJL189W	SPN1	Q06505	410 aa	Predicted RBP	2.58	□□□□□ -2
RPL39	YJL189W	BUD7	Q08754	746 aa		2.58	□□□□□ -2
RPL39	YJL189W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
RPL39	YJL189W	AHA1	Q12449	350 aa	Known RBP	2.58	□□□□□ -2
RPL39	YJL189W	AIM44	Q99299	758 aa		2.58	□□□□□ -2
RPL39	YJL189W	IMD2	P38697	523 aa	Known RBP	2.57	□□□□□ -2
RPL39	YJL189W	CKB2	P38930	258 aa		2.57	□□□□□ -2
RPL39	YJL189W	VID28	P40547	921 aa		2.57	□□□□□ -2
RPL39	YJL189W	IRC7	P43623	340 aa		2.57	□□□□□ -2
RPL39	YJL189W	IMD3	P50095	523 aa	Known RBP	2.57	□□□□□ -2
RPL39	YJL189W	SDA1	P53313	767 aa	Known RBP	2.57	□□□□□ -2
RPL39	YJL189W	RPL15B	P54780	204 aa	Predicted RBP	2.57	□□□□□ -2
RPL39	YJL189W	POB3	Q04636	552 aa	Known RBP	2.57	□□□□□ -2
RPL39	YJL189W	CYK3	Q07533	885 aa		2.57	□□□□□ -2
RPL39	YJL189W	AIM41	Q12032	185 aa		2.57	□□□□□ -2
RPL39	YJL189W	GAL4	P04386	881 aa		2.56	□□□□□ -2
RPL39	YJL189W	RPS21A	P0C0V8	87 aa	Known RBP	2.56	□□□□□ -2
RPL39	YJL189W	CDC26	P14724	124 aa		2.56	□□□□□ -2
RPL39	YJL189W	PRP19	P32523	503 aa	Known RBP	2.56	□□□□□ -2
RPL39	YJL189W	RMA1	P36001	430 aa	Known RBP	2.56	□□□□□ -2
RPL39	YJL189W	GND1	P38720	489 aa	Known RBP	2.56	□□□□□ -2
RPL39	YJL189W	YAT2	P40017	923 aa		2.56	□□□□□ -2
RPL39	YJL189W	NSE5	Q03718	556 aa		2.56	□□□□□ -2
RPL39	YJL189W	MRPL1	Q04599	285 aa		2.56	□□□□□ -2
RPL39	YJL189W	SRL1	Q08673	210 aa		2.56	□□□□□ -2
RPL39	YJL189W	YEL076C-A	P0CX16	216 aa		2.55	□□□□□ -2
RPL39	YJL189W	YLR464W	P0CX17	216 aa		2.55	□□□□□ -2
RPL39	YJL189W	HMG2	P12684	1045 aa		2.55	□□□□□ -2
RPL39	YJL189W	ATO2	P32907	282 aa		2.55	□□□□□ -2
RPL39	YJL189W	YEL076C	P39971	216 aa		2.55	□□□□□ -2
RPL39	YJL189W	YIL092W	P40497	633 aa		2.55	□□□□□ -2
RPL39	YJL189W	CFD1	P40558	293 aa		2.55	□□□□□ -2
RPL39	YJL189W	YGR153W	P48238	217 aa		2.55	□□□□□ -2
RPL39	YJL189W	ECM9	Q02202	377 aa		2.55	□□□□□ -2
RPL39	YJL189W	YHM2	Q04013	314 aa		2.55	□□□□□ -2
RPL39	YJL189W	ENT2	Q05785	613 aa		2.55	□□□□□ -2
RPL39	YJL189W	BI2	P03873	423 aa		2.54	□□□□□ -2
RPL39	YJL189W	PCK1	P10963	549 aa		2.54	□□□□□ -2
RPL39	YJL189W	RPL8A	P17076	256 aa	Known RBP	2.54	□□□□□ -2
RPL39	YJL189W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
RPL39	YJL189W	COQ3	P27680	312 aa		2.54	□□□□□ -2
RPL39	YJL189W	OAF3	P36023	863 aa		2.54	□□□□□ -2
RPL39	YJL189W	YJL193W	P39542	402 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 94 ms