RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C BET4Q00618 327 aa10.1□□□□□ -0.79
MET28YIR017C TDA9Q04545 1251 aa10.1□□□□□ -0.79
MET28YIR017C APL5Q08951 932 aaKnown RBP10.1□□□□□ -0.79
MET28YIR017C YPQ1Q12010 308 aa10.1□□□□□ -0.79
MET28YIR017C YDR018CQ12185 396 aa10.1□□□□□ -0.79
MET28YIR017C PSE1P32337 1089 aaKnown RBP10.09□□□□□ -0.79
MET28YIR017C ECM13P38195 257 aa10.09□□□□□ -0.79
MET28YIR017C MMS21P38632 267 aa10.09□□□□□ -0.79
MET28YIR017C YMR134WP40207 237 aa10.09□□□□□ -0.79
MET28YIR017C MNN11P46985 422 aaKnown RBP10.09□□□□□ -0.79
MET28YIR017C YJR079WP47126 109 aa10.09□□□□□ -0.79
MET28YIR017C HLJ1P48353 224 aa10.09□□□□□ -0.79
MET28YIR017C ATG23Q06671 453 aa10.09□□□□□ -0.79
MET28YIR017C LPX1Q12405 387 aaKnown RBP10.09□□□□□ -0.79
MET28YIR017C IZH4Q99393 312 aa10.09□□□□□ -0.79
MET28YIR017C CDC8P00572 216 aa10.08□□□□□ -0.8
MET28YIR017C ATG12P38316 186 aa10.08□□□□□ -0.8
MET28YIR017C FSH1P38777 243 aaKnown RBP10.08□□□□□ -0.8
MET28YIR017C LAM1P38851 1228 aa10.08□□□□□ -0.8
MET28YIR017C FLC2P39719 783 aa10.08□□□□□ -0.8
MET28YIR017C UFE1P41834 346 aa10.08□□□□□ -0.8
MET28YIR017C RGD2P43556 714 aa10.08□□□□□ -0.8
MET28YIR017C RTT101P47050 842 aa10.08□□□□□ -0.8
MET28YIR017C UTP6Q02354 440 aaKnown RBP10.08□□□□□ -0.8
MET28YIR017C LEE1Q02799 301 aaKnown RBP10.08□□□□□ -0.8
MET28YIR017C INA17Q02888 182 aa10.08□□□□□ -0.8
MET28YIR017C RRB1Q04225 511 aaKnown RBP10.08□□□□□ -0.8
MET28YIR017C RIO1Q12196 484 aaKnown RBP10.08□□□□□ -0.8
MET28YIR017C RRD2Q12461 358 aa10.08□□□□□ -0.8
MET28YIR017C YDR034W-BQ6Q5X2 51 aa10.08□□□□□ -0.8
MET28YIR017C ENO2P00925 437 aaKnown RBP10.07□□□□□ -0.8
MET28YIR017C MSG5P38590 489 aa10.07□□□□□ -0.8
MET28YIR017C SAW1P39735 261 aa10.07□□□□□ -0.8
MET28YIR017C RFX1P48743 811 aa10.07□□□□□ -0.8
MET28YIR017C YNL144CP53907 740 aa10.07□□□□□ -0.8
MET28YIR017C BSP1Q06604 576 aa10.07□□□□□ -0.8
MET28YIR017C FAP7Q12055 197 aaPredicted RBP10.07□□□□□ -0.8
MET28YIR017C SEY1Q99287 776 aa10.07□□□□□ -0.8
MET28YIR017C YPR117WQ06116 2489 aa10.07□□□□□ -0.8
MET28YIR017C HIS1P00498 297 aaKnown RBP10.06□□□□□ -0.8
MET28YIR017C RAD10P06838 210 aa10.06□□□□□ -0.8
MET28YIR017C MET16P18408 261 aaPredicted RBP10.06□□□□□ -0.8
MET28YIR017C RPO26P20435 155 aa10.06□□□□□ -0.8
MET28YIR017C SEC6P32844 805 aa10.06□□□□□ -0.8
MET28YIR017C DIA4P38705 446 aaPredicted RBP10.06□□□□□ -0.8
MET28YIR017C AIM18P38884 321 aa10.06□□□□□ -0.8
MET28YIR017C YIL161WP40449 235 aaKnown RBP10.06□□□□□ -0.8
MET28YIR017C MRX6P48564 524 aa10.06□□□□□ -0.8
MET28YIR017C PRP31P49704 494 aaPredicted RBP10.06□□□□□ -0.8
MET28YIR017C VPS9P54787 451 aa10.06□□□□□ -0.8
MET28YIR017C RPL22BP56628 122 aaKnown RBP10.06□□□□□ -0.8
MET28YIR017C ARA2Q04212 335 aa10.06□□□□□ -0.8
MET28YIR017C NUR1Q12066 484 aa10.06□□□□□ -0.8
MET28YIR017C LCB4Q12246 624 aa10.06□□□□□ -0.8
MET28YIR017C EFG1Q3E705 233 aaKnown RBP10.06□□□□□ -0.8
MET28YIR017C PPH22P23595 377 aa10.05□□□□□ -0.8
MET28YIR017C YCR015CP25616 317 aa10.05□□□□□ -0.8
MET28YIR017C ISF1P32488 338 aa10.05□□□□□ -0.8
MET28YIR017C GCD6P32501 712 aaKnown RBP10.05□□□□□ -0.8
MET28YIR017C SGE1P33335 543 aa10.05□□□□□ -0.8
MET28YIR017C KTR4P38131 464 aa10.05□□□□□ -0.8
MET28YIR017C DUG2P38149 878 aa10.05□□□□□ -0.8
MET28YIR017C PBP2P38151 413 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
MET28YIR017C ECM2P38241 364 aaKnown RBP10.05□□□□□ -0.8
MET28YIR017C POP4P38336 279 aa10.05□□□□□ -0.8
MET28YIR017C BIT2P38346 545 aa10.05□□□□□ -0.8
MET28YIR017C URA8P38627 578 aaPredicted RBP10.05□□□□□ -0.8
MET28YIR017C STL1P39932 569 aa10.05□□□□□ -0.8
MET28YIR017C EDC3P39998 551 aaKnown RBP10.05□□□□□ -0.8
MET28YIR017C MKT1P40850 830 aaKnown RBP10.05□□□□□ -0.8
MET28YIR017C RRT5P43607 289 aa10.05□□□□□ -0.8
MET28YIR017C CNN1P43618 361 aa10.05□□□□□ -0.8
MET28YIR017C YJL132WP47014 750 aa10.05□□□□□ -0.8
MET28YIR017C TCB2P48231 1178 aa10.05□□□□□ -0.8
MET28YIR017C GRX8Q05926 109 aa10.05□□□□□ -0.8
MET28YIR017C YLL056CQ12177 298 aa10.05□□□□□ -0.8
MET28YIR017C PUF2Q12221 1075 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
MET28YIR017C GPM3Q12326 303 aa10.05□□□□□ -0.8
MET28YIR017C RMP1Q12530 201 aa10.05□□□□□ -0.8
MET28YIR017C SPO16P17122 198 aa10.04□□□□□ -0.8
MET28YIR017C ADY2P25613 283 aa10.04□□□□□ -0.8
MET28YIR017C HXT3P32466 567 aaKnown RBP10.04□□□□□ -0.8
MET28YIR017C VHC1P38329 1120 aa10.04□□□□□ -0.8
MET28YIR017C YHR131CP38835 850 aa10.04□□□□□ -0.8
MET28YIR017C VAC8P39968 578 aa10.04□□□□□ -0.8
MET28YIR017C EMW1P42842 904 aaKnown RBP10.04□□□□□ -0.8
MET28YIR017C BST1P43571 1029 aa10.04□□□□□ -0.8
MET28YIR017C YGR127WP53275 312 aa10.04□□□□□ -0.8
MET28YIR017C COQ6P53318 479 aa10.04□□□□□ -0.8
MET28YIR017C DOS2P54858 310 aa10.04□□□□□ -0.8
MET28YIR017C TOF2Q02208 771 aa10.04□□□□□ -0.8
MET28YIR017C PIR3Q03180 325 aa10.04□□□□□ -0.8
MET28YIR017C ECM38Q05902 660 aaPredicted RBP10.04□□□□□ -0.8
MET28YIR017C NOP6Q07623 225 aaKnown RBP10.04□□□□□ -0.8
MET28YIR017C DAP1Q12091 152 aa10.04□□□□□ -0.8
MET28YIR017C RAM1P22007 431 aa10.03□□□□□ -0.8
MET28YIR017C PUF4P25339 888 aaKnown RBP RIP-Chip data10.03□□□□□ -0.8not detected
MET28YIR017C RAD5P32849 1169 aaPredicted RBP10.03□□□□□ -0.8
MET28YIR017C NFU1P32860 256 aa10.03□□□□□ -0.8
MET28YIR017C RDH54P38086 958 aa10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 109.1 ms