RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C COT1P32798 439 aa3.69□□□□□ -1.82
SSM4YIL030C ABZ1P37254 787 aaPredicted RBP3.69□□□□□ -1.82
SSM4YIL030C SWC5P38326 303 aa3.69□□□□□ -1.82
SSM4YIL030C STB5P38699 743 aa3.69□□□□□ -1.82
SSM4YIL030C DIA4P38705 446 aaPredicted RBP3.69□□□□□ -1.82
SSM4YIL030C LAM5P43560 674 aa3.69□□□□□ -1.82
SSM4YIL030C OSW7P43611 510 aa3.69□□□□□ -1.82
SSM4YIL030C MRPS16Q02608 121 aa3.69□□□□□ -1.82
SSM4YIL030C RNY1Q02933 434 aaKnown RBP3.69□□□□□ -1.82
SSM4YIL030C YDR090CQ03193 310 aa3.69□□□□□ -1.82
SSM4YIL030C AIM32Q04689 311 aa3.69□□□□□ -1.82
SSM4YIL030C SPH1Q06160 661 aa3.69□□□□□ -1.82
SSM4YIL030C NFI1Q12216 726 aa3.69□□□□□ -1.82
SSM4YIL030C HRT3Q12347 344 aa3.69□□□□□ -1.82
SSM4YIL030C KCS1Q12494 1050 aa3.69□□□□□ -1.82
SSM4YIL030C SRD1P09007 221 aa3.69□□□□□ -1.82
SSM4YIL030C DUR3P33413 735 aa3.69□□□□□ -1.82
SSM4YIL030C NCL1P38205 684 aaKnown RBP3.69□□□□□ -1.82
SSM4YIL030C UBP9P39967 754 aa3.69□□□□□ -1.82
SSM4YIL030C KTR7P40504 517 aa3.69□□□□□ -1.82
SSM4YIL030C SNZ3P43545 298 aa3.69□□□□□ -1.82
SSM4YIL030C SNZ2P53824 298 aa3.69□□□□□ -1.82
SSM4YIL030C YNL181WP53878 407 aa3.69□□□□□ -1.82
SSM4YIL030C UBX4P54730 416 aa3.69□□□□□ -1.82
SSM4YIL030C KIN4Q01919 800 aa3.69□□□□□ -1.82
SSM4YIL030C GIS4Q04233 774 aa3.69□□□□□ -1.82
SSM4YIL030C DUS4Q06063 367 aa3.69□□□□□ -1.82
SSM4YIL030C HDA3Q06623 655 aa3.69□□□□□ -1.82
SSM4YIL030C MDM38Q08179 573 aa3.69□□□□□ -1.82
SSM4YIL030C ATG11Q12527 1178 aa3.69□□□□□ -1.82
SSM4YIL030C DPB2P24482 689 aaPredicted RBP3.69□□□□□ -1.82
SSM4YIL030C MRPL6P32904 214 aa3.69□□□□□ -1.82
SSM4YIL030C STB2P46679 850 aa3.69□□□□□ -1.82
SSM4YIL030C PRM6Q04705 352 aa3.69□□□□□ -1.82
SSM4YIL030C RSC2Q06488 889 aa3.69□□□□□ -1.82
SSM4YIL030C GPI13Q07830 1017 aa3.69□□□□□ -1.82
SSM4YIL030C ACM1Q08981 209 aa3.69□□□□□ -1.82
SSM4YIL030C YOR342CQ12182 319 aa3.69□□□□□ -1.82
SSM4YIL030C RRP36Q12481 300 aaPredicted RBP3.69□□□□□ -1.82
SSM4YIL030C ARP6Q12509 438 aa3.69□□□□□ -1.82
SSM4YIL030C PHO81P17442 1178 aa3.68□□□□□ -1.82
SSM4YIL030C DBF4P32325 704 aa3.68□□□□□ -1.82
SSM4YIL030C RDH54P38086 958 aa3.68□□□□□ -1.82
SSM4YIL030C ECM8P38246 354 aa3.68□□□□□ -1.82
SSM4YIL030C UTP18P40362 594 aaPredicted RBP3.68□□□□□ -1.82
SSM4YIL030C NOP9P47077 666 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C ZPR1P53303 486 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C AI5_ALPHAQ9ZZX1 630 aa3.68□□□□□ -1.82
SSM4YIL030C AI4P03878 556 aa3.68□□□□□ -1.82
SSM4YIL030C TPK3P05986 398 aa3.68□□□□□ -1.82
SSM4YIL030C TUB1P09733 447 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C OM45P16547 393 aa3.68□□□□□ -1.82
SSM4YIL030C REC107P21651 314 aa3.68□□□□□ -1.82
SSM4YIL030C ICL1P28240 557 aaPredicted RBP3.68□□□□□ -1.82
SSM4YIL030C POP4P38336 279 aa3.68□□□□□ -1.82
SSM4YIL030C TIF5P38431 405 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C SEC26P41810 973 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C TIM8P57744 87 aa3.68□□□□□ -1.82
SSM4YIL030C YML082WQ04533 649 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C GAS5Q08193 484 aa3.68□□□□□ -1.82
SSM4YIL030C KSS1P14681 368 aa3.68□□□□□ -1.82
SSM4YIL030C DBP5P20449 482 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C FAR1P21268 830 aa3.68□□□□□ -1.82
SSM4YIL030C EXO5P38289 585 aa3.68□□□□□ -1.82
SSM4YIL030C ERP5P38819 212 aa3.68□□□□□ -1.82
SSM4YIL030C NDT80P38830 627 aa3.68□□□□□ -1.82
SSM4YIL030C SEO1P39709 593 aa3.68□□□□□ -1.82
SSM4YIL030C SEC28P40509 296 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C YJL132WP47014 750 aa3.68□□□□□ -1.82
SSM4YIL030C MAD3P47074 515 aa3.68□□□□□ -1.82
SSM4YIL030C PRO2P54885 456 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C CWC15Q03772 175 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C VMS1Q04311 632 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C BUD22Q04347 519 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C UTP14Q04500 899 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C ARO10Q06408 635 aa3.68□□□□□ -1.82
SSM4YIL030C YPR196WQ06595 470 aa3.68□□□□□ -1.82
SSM4YIL030C SUB2Q07478 446 aaKnown RBP3.68□□□□□ -1.82
SSM4YIL030C KRE6P32486 720 aa3.67□□□□□ -1.82
SSM4YIL030C SMC1P32908 1225 aa3.67□□□□□ -1.82
SSM4YIL030C PEX5P35056 612 aa3.67□□□□□ -1.82
SSM4YIL030C MTG2P38860 518 aa3.67□□□□□ -1.82
SSM4YIL030C AIM18P38884 321 aa3.67□□□□□ -1.82
SSM4YIL030C YEL023CP39992 682 aa3.67□□□□□ -1.82
SSM4YIL030C FCY21P40039 528 aa3.67□□□□□ -1.82
SSM4YIL030C TMN3P40071 706 aa3.67□□□□□ -1.82
SSM4YIL030C IRC5P43610 853 aa3.67□□□□□ -1.82
SSM4YIL030C YGR067CP53243 804 aa3.67□□□□□ -1.82
SSM4YIL030C CNM67P53865 581 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C SPR6Q01684 191 aa3.67□□□□□ -1.82
SSM4YIL030C ATG17Q06410 417 aa3.67□□□□□ -1.82
SSM4YIL030C RRI2Q12348 645 aa3.67□□□□□ -1.82
SSM4YIL030C SSA2P10592 639 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C CNA1P23287 553 aa3.67□□□□□ -1.82
SSM4YIL030C GFD2P25370 566 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C GDH2P33327 1092 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C HCS1P34243 683 aa3.67□□□□□ -1.82
SSM4YIL030C RRN3P36070 627 aa3.67□□□□□ -1.82
SSM4YIL030C ECM2P38241 364 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C APM2P38700 605 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms