RNA–Protein interactions for RNA: YHR190W

ERG9, Transcript of Farnesyl-diphosphate farnesyl transferase (squalene synthase), yeast

Gene ERG9, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERG9	YHR190W	HEM1	P09950	548 aa	Predicted RBP	4.11	□□□□□ -1.75
ERG9	YHR190W	WHI2	P12611	486 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	PMA2	P19657	947 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	CAP1	P28495	268 aa	Known RBP	4.11	□□□□□ -1.75
ERG9	YHR190W	MRPL9	P31334	269 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	DID4	P36108	232 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	APD1	P38281	316 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	ERP2	P39704	215 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	COQ6	P53318	479 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	FOL1	P53848	824 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	RGT2	Q12300	763 aa		4.11	□□□□□ -1.75
ERG9	YHR190W	CPA2	P03965	1118 aa	Known RBP	4.1	□□□□□ -1.75
ERG9	YHR190W	RPL7A	P05737	244 aa	Known RBP	4.1	□□□□□ -1.75
ERG9	YHR190W	CNE1	P27825	502 aa		4.1	□□□□□ -1.75
ERG9	YHR190W	RPS0A	P32905	252 aa	Known RBP	4.1	□□□□□ -1.75
ERG9	YHR190W	RPC34	P32910	317 aa		4.1	□□□□□ -1.75
ERG9	YHR190W	MRPL7	P36519	292 aa		4.1	□□□□□ -1.75
ERG9	YHR190W	CRG1	P38892	291 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
ERG9	YHR190W	UBP12	P39538	1254 aa		4.1	□□□□□ -1.75
ERG9	YHR190W	FTR1	P40088	404 aa		4.1	□□□□□ -1.75
ERG9	YHR190W	PSA1	P41940	361 aa	Known RBP	4.1	□□□□□ -1.75
ERG9	YHR190W	BUD17	P53727	317 aa		4.1	□□□□□ -1.75
ERG9	YHR190W	DNM1	P54861	757 aa		4.1	□□□□□ -1.75
ERG9	YHR190W	MTQ2	Q03920	221 aa	Predicted RBP	4.1	□□□□□ -1.75
ERG9	YHR190W	YHM2	Q04013	314 aa		4.1	□□□□□ -1.75
ERG9	YHR190W	RPL7B	Q12213	244 aa	Known RBP	4.1	□□□□□ -1.75
ERG9	YHR190W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
ERG9	YHR190W	MBR1	P23493	339 aa		4.09	□□□□□ -1.75
ERG9	YHR190W	OAF3	P36023	863 aa		4.09	□□□□□ -1.75
ERG9	YHR190W	YHR033W	P38690	423 aa		4.09	□□□□□ -1.75
ERG9	YHR190W	PRM2	P40534	656 aa		4.09	□□□□□ -1.75
ERG9	YHR190W	MNN11	P46985	422 aa	Known RBP	4.09	□□□□□ -1.75
ERG9	YHR190W	ECM9	Q02202	377 aa		4.09	□□□□□ -1.75
ERG9	YHR190W	HFI1	Q12060	488 aa		4.09	□□□□□ -1.75
ERG9	YHR190W	APM4	Q99186	491 aa		4.09	□□□□□ -1.75
ERG9	YHR190W	GLN4	P13188	809 aa	Known RBP	4.08	□□□□□ -1.76
ERG9	YHR190W	TRX2	P22803	104 aa	Known RBP	4.08	□□□□□ -1.76
ERG9	YHR190W	MPE1	P35728	441 aa	Known RBP	4.08	□□□□□ -1.76
ERG9	YHR190W	HXT6	P39003	570 aa	Known RBP	4.08	□□□□□ -1.76
ERG9	YHR190W	HXT7	P39004	570 aa		4.08	□□□□□ -1.76
ERG9	YHR190W	OPT1	P40897	799 aa		4.08	□□□□□ -1.76
ERG9	YHR190W	ATP23	P53722	227 aa		4.08	□□□□□ -1.76
ERG9	YHR190W	MPS1	P54199	764 aa		4.08	□□□□□ -1.76
ERG9	YHR190W	STP1	Q00947	519 aa		4.08	□□□□□ -1.76
ERG9	YHR190W	RPS21B	Q3E754	87 aa	Known RBP	4.08	□□□□□ -1.76
ERG9	YHR190W	NUP145	P49687	1317 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	TUP1	P16649	713 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	HOP1	P20050	605 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	DGR2	P32330	852 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	BEM3	P32873	1128 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	PIP2	P52960	996 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	YNL018C	P53976	612 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	TIM50	Q02776	476 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	UME1	Q03010	460 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	HIF1	Q12373	385 aa		4.07	□□□□□ -1.76
ERG9	YHR190W	SWR1	Q05471	1514 aa		4.06	□□□□□ -1.76
ERG9	YHR190W	MF(ALPHA)2	P32435	120 aa		4.06	□□□□□ -1.76
ERG9	YHR190W	TOA1	P32773	286 aa		4.06	□□□□□ -1.76
ERG9	YHR190W	CCL1	P37366	393 aa		4.06	□□□□□ -1.76
ERG9	YHR190W	FUI1	P38196	639 aa		4.06	□□□□□ -1.76
ERG9	YHR190W	OAF1	P39720	1047 aa	Predicted RBP	4.06	□□□□□ -1.76
ERG9	YHR190W	ERG13	P54839	491 aa	Known RBP	4.06	□□□□□ -1.76
ERG9	YHR190W	YCG1	Q06680	1035 aa		4.06	□□□□□ -1.76
ERG9	YHR190W	LEU2	P04173	364 aa	Predicted RBP	4.05	□□□□□ -1.76
ERG9	YHR190W	CDS1	P38221	457 aa		4.05	□□□□□ -1.76
ERG9	YHR190W	VID28	P40547	921 aa		4.05	□□□□□ -1.76
ERG9	YHR190W	SNO3	P43544	222 aa		4.05	□□□□□ -1.76
ERG9	YHR190W	YJL043W	P47053	257 aa		4.05	□□□□□ -1.76
ERG9	YHR190W	YGL081W	P53156	320 aa		4.05	□□□□□ -1.76
ERG9	YHR190W	ENT2	Q05785	613 aa		4.05	□□□□□ -1.76
ERG9	YHR190W	BRE1	Q07457	700 aa	Known RBP	4.05	□□□□□ -1.76
ERG9	YHR190W	SEC12	P11655	471 aa		4.04	□□□□□ -1.76
ERG9	YHR190W	AEP2	P22136	580 aa		4.04	□□□□□ -1.76
ERG9	YHR190W	EUG1	P32474	517 aa		4.04	□□□□□ -1.76
ERG9	YHR190W	LRO1	P40345	661 aa		4.04	□□□□□ -1.76
ERG9	YHR190W	NMD5	P46970	1048 aa		4.04	□□□□□ -1.76
ERG9	YHR190W	RNR4	P49723	345 aa	Known RBP	4.04	□□□□□ -1.76
ERG9	YHR190W	SQS1	P53866	767 aa	Known RBP	4.04	□□□□□ -1.76
ERG9	YHR190W	RPS15	Q01855	142 aa	Known RBP	4.04	□□□□□ -1.76
ERG9	YHR190W	TMA64	Q04600	565 aa	Known RBP	4.04	□□□□□ -1.76
ERG9	YHR190W	QCR6	P00127	147 aa		4.03	□□□□□ -1.76
ERG9	YHR190W	HMG2	P12684	1045 aa		4.03	□□□□□ -1.76
ERG9	YHR190W	YJL193W	P39542	402 aa		4.03	□□□□□ -1.76
ERG9	YHR190W	COG4	Q06096	861 aa		4.03	□□□□□ -1.76
ERG9	YHR190W	ARR3	Q06598	404 aa		4.03	□□□□□ -1.76
ERG9	YHR190W	FAP7	Q12055	197 aa	Predicted RBP	4.03	□□□□□ -1.76
ERG9	YHR190W	NYV1	Q12255	253 aa		4.03	□□□□□ -1.76
ERG9	YHR190W	VPS33	P20795	691 aa		4.02	□□□□□ -1.77
ERG9	YHR190W	RNR3	P21672	869 aa	Known RBP	4.02	□□□□□ -1.77
ERG9	YHR190W	ENP1	P38333	483 aa	Known RBP	4.02	□□□□□ -1.77
ERG9	YHR190W	NOC2	P39744	710 aa	Known RBP	4.02	□□□□□ -1.77
ERG9	YHR190W	EXO1	P39875	702 aa		4.02	□□□□□ -1.77
ERG9	YHR190W	YIL092W	P40497	633 aa		4.02	□□□□□ -1.77
ERG9	YHR190W	YJR120W	P47157	116 aa		4.02	□□□□□ -1.77
ERG9	YHR190W	YNR029C	P53729	429 aa	Known RBP	4.02	□□□□□ -1.77
ERG9	YHR190W	WAR1	Q03631	944 aa		4.02	□□□□□ -1.77
ERG9	YHR190W	USA1	Q03714	838 aa		4.02	□□□□□ -1.77
ERG9	YHR190W	RPS21A	P0C0V8	87 aa	Known RBP	4.01	□□□□□ -1.77
ERG9	YHR190W	AQY1	P0CD91	305 aa		4.01	□□□□□ -1.77
ERG9	YHR190W	CDC26	P14724	124 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms