RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W SXM1Q04175 944 aaKnown RBP7.75□□□□□ -1.17
PEX28YHR150W EMP46Q12396 444 aa7.75□□□□□ -1.17
PEX28YHR150W SPE4Q12455 300 aa7.75□□□□□ -1.17
PEX28YHR150W EXO70P19658 623 aa7.75□□□□□ -1.17
PEX28YHR150W NOP4P37838 685 aaKnown RBP7.75□□□□□ -1.17
PEX28YHR150W SWC5P38326 303 aa7.75□□□□□ -1.17
PEX28YHR150W SCC4P40090 624 aa7.75□□□□□ -1.17
PEX28YHR150W ELP3Q02908 557 aaKnown RBP7.75□□□□□ -1.17
PEX28YHR150W FMN1Q03778 218 aa7.75□□□□□ -1.17
PEX28YHR150W YRR1Q12172 810 aa7.75□□□□□ -1.17
PEX28YHR150W MOT1P32333 1867 aa7.74□□□□□ -1.17
PEX28YHR150W COX4P04037 155 aa7.74□□□□□ -1.17
PEX28YHR150W TIF1P10081 395 aaKnown RBP7.74□□□□□ -1.17
PEX28YHR150W SEC6P32844 805 aa7.74□□□□□ -1.17
PEX28YHR150W CBF5P33322 483 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
PEX28YHR150W YHL008CP38750 627 aa7.74□□□□□ -1.17
PEX28YHR150W YJL206CP39529 758 aa7.74□□□□□ -1.17
PEX28YHR150W RPT2P40327 437 aaKnown RBP7.74□□□□□ -1.17
PEX28YHR150W JEM1P40358 645 aa7.74□□□□□ -1.17
PEX28YHR150W PRK1P40494 810 aa7.74□□□□□ -1.17
PEX28YHR150W SEC27P41811 889 aaKnown RBP7.74□□□□□ -1.17
PEX28YHR150W ASG7P46993 209 aa7.74□□□□□ -1.17
PEX28YHR150W MND1P53102 219 aa7.74□□□□□ -1.17
PEX28YHR150W LSC1P53598 329 aaKnown RBP7.74□□□□□ -1.17
PEX28YHR150W NMA111P53920 997 aa7.74□□□□□ -1.17
PEX28YHR150W CDC55Q00362 526 aa7.74□□□□□ -1.17
PEX28YHR150W SND1Q04007 877 aa7.74□□□□□ -1.17
PEX28YHR150W DOT1Q04089 582 aaKnown RBP7.74□□□□□ -1.17
PEX28YHR150W CDD1Q06549 142 aa7.74□□□□□ -1.17
PEX28YHR150W YPR027CQ12079 277 aa7.74□□□□□ -1.17
PEX28YHR150W GPM3Q12326 303 aa7.74□□□□□ -1.17
PEX28YHR150W LAA1P39526 2014 aa7.73□□□□□ -1.17
PEX28YHR150W PYC2P32327 1180 aaKnown RBP7.73□□□□□ -1.17
PEX28YHR150W MRP4P32902 394 aa7.73□□□□□ -1.17
PEX28YHR150W YHR054CP38780 354 aa7.73□□□□□ -1.17
PEX28YHR150W PSF2P40359 213 aa7.73□□□□□ -1.17
PEX28YHR150W YIL054WP40524 105 aa7.73□□□□□ -1.17
PEX28YHR150W TAH11P47112 604 aa7.73□□□□□ -1.17
PEX28YHR150W YJR054WP47114 497 aa7.73□□□□□ -1.17
PEX28YHR150W SNU56Q03782 492 aaKnown RBP7.73□□□□□ -1.17
PEX28YHR150W YKU80Q04437 629 aa7.73□□□□□ -1.17
PEX28YHR150W YSH1Q06224 779 aaPredicted RBP7.73□□□□□ -1.17
PEX28YHR150W ADY3Q07732 790 aa7.73□□□□□ -1.17
PEX28YHR150W DIA2Q08496 732 aaPredicted RBP7.73□□□□□ -1.17
PEX28YHR150W ICL2Q12031 575 aa7.73□□□□□ -1.17
PEX28YHR150W YOR131CQ12486 218 aa7.73□□□□□ -1.17
PEX28YHR150W AVL9Q12500 764 aa7.73□□□□□ -1.17
PEX28YHR150W GLN3P18494 730 aa7.72□□□□□ -1.17
PEX28YHR150W VBA3P25594 458 aa7.72□□□□□ -1.17
PEX28YHR150W YCR015CP25616 317 aa7.72□□□□□ -1.17
PEX28YHR150W VBA5P36172 582 aa7.72□□□□□ -1.17
PEX28YHR150W APN2P38207 520 aa7.72□□□□□ -1.17
PEX28YHR150W TRM5P38793 499 aa7.72□□□□□ -1.17
PEX28YHR150W CKB2P38930 258 aa7.72□□□□□ -1.17
PEX28YHR150W YDR089WP38966 869 aa7.72□□□□□ -1.17
PEX28YHR150W INP51P40559 946 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W FAR3P46671 204 aa7.72□□□□□ -1.17
PEX28YHR150W STB4P50104 949 aa7.72□□□□□ -1.17
PEX28YHR150W RTA1P53047 317 aa7.72□□□□□ -1.17
PEX28YHR150W ARI1P53111 347 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W YNL134CP53912 376 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W NOP15P53927 220 aaPredicted RBP7.72□□□□□ -1.17
PEX28YHR150W MUK1Q02866 612 aa7.72□□□□□ -1.17
PEX28YHR150W MZM1Q03429 123 aaPredicted RBP7.72□□□□□ -1.17
PEX28YHR150W ARO80Q04052 950 aa7.72□□□□□ -1.17
PEX28YHR150W MDM38Q08179 573 aa7.72□□□□□ -1.17
PEX28YHR150W AIM39Q08223 395 aa7.72□□□□□ -1.17
PEX28YHR150W RUP1Q12242 671 aa7.72□□□□□ -1.17
PEX28YHR150W MAM3Q12296 706 aa7.72□□□□□ -1.17
PEX28YHR150W IMA3P0CW40 589 aa7.72□□□□□ -1.17
PEX28YHR150W IMA4P0CW41 589 aa7.72□□□□□ -1.17
PEX28YHR150W LRE1P25579 583 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W RAD14P28519 371 aa7.72□□□□□ -1.17
PEX28YHR150W HXT3P32466 567 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W DPH5P32469 300 aaPredicted RBP7.72□□□□□ -1.17
PEX28YHR150W DUR3P33413 735 aa7.72□□□□□ -1.17
PEX28YHR150W NUP120P35729 1037 aa7.72□□□□□ -1.17
PEX28YHR150W HES1P35843 434 aa7.72□□□□□ -1.17
PEX28YHR150W DRE2P36152 348 aa7.72□□□□□ -1.17
PEX28YHR150W AGP2P38090 596 aa7.72□□□□□ -1.17
PEX28YHR150W MAP2P38174 421 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W YBL036CP38197 257 aa7.72□□□□□ -1.17
PEX28YHR150W ALD5P40047 520 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W PEP8P40335 379 aa7.72□□□□□ -1.17
PEX28YHR150W DPH1P40487 425 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W ALT2P52892 507 aa7.72□□□□□ -1.17
PEX28YHR150W MRM2P53123 320 aa7.72□□□□□ -1.17
PEX28YHR150W UTP8P53276 713 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W YNL247WP53852 767 aaKnown RBP7.72□□□□□ -1.17
PEX28YHR150W IMA2Q08295 589 aa7.72□□□□□ -1.17
PEX28YHR150W SLP1Q12232 587 aa7.72□□□□□ -1.17
PEX28YHR150W SUT2Q12286 268 aa7.72□□□□□ -1.17
PEX28YHR150W STB3Q12427 513 aa7.72□□□□□ -1.17
PEX28YHR150W CHS1P08004 1131 aa7.71□□□□□ -1.18
PEX28YHR150W PUT4P15380 627 aa7.71□□□□□ -1.18
PEX28YHR150W DGR2P32330 852 aa7.71□□□□□ -1.18
PEX28YHR150W YMC2P38087 329 aa7.71□□□□□ -1.18
PEX28YHR150W ETP1P38748 585 aaKnown RBP7.71□□□□□ -1.18
PEX28YHR150W YER186CP40101 306 aa7.71□□□□□ -1.18
PEX28YHR150W MAD3P47074 515 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms