RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	GCN20	P43535	752 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	FOL2	P51601	243 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	MCM6	P53091	1017 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	YGR053C	P53234	283 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	UTP6	Q02354	440 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	ORM2	Q06144	216 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	VIP1	Q06685	1146 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	MAK31	P23059	88 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	RPC19	P28000	142 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	TOA1	P32773	286 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	YME1	P32795	747 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	NPL6	P32832	435 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	YKL133C	P36066	463 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	ABZ1	P37254	787 aa	Predicted RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	MCM7	P38132	845 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	TIF5	P38431	405 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	STT3	P39007	718 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	BEM4	P39011	633 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	SCS2	P40075	244 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	SET2	P46995	733 aa	Known RBP	4.58	□□□□□ -1.68
XKS1	YGR194C	TYW3	P53177	273 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	COS6	P53344	381 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	MRPL22	P53881	309 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	INP2	Q03824	705 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	GTB1	Q04924	702 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	SVF1	Q05515	481 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	NDL1	Q06568	189 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	MLH2	Q07980	695 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	RUP1	Q12242	671 aa		4.58	□□□□□ -1.68
XKS1	YGR194C	RPL24A	P04449	155 aa	Known RBP	4.57	□□□□□ -1.68
XKS1	YGR194C	RIT1	P23796	513 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	RPL5	P26321	297 aa	Known RBP	4.57	□□□□□ -1.68
XKS1	YGR194C	RPC82	P32349	654 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	PLC1	P32383	869 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	YBL055C	P34220	418 aa	Predicted RBP	4.57	□□□□□ -1.68
XKS1	YGR194C	SAK1	P38990	1142 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	TAD1	P53065	400 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	YGL138C	P53122	345 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	LGE1	Q02796	332 aa	Known RBP	4.57	□□□□□ -1.68
XKS1	YGR194C	ADY4	Q05955	493 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	RSB1	Q08417	382 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	MET7	Q08645	548 aa		4.57	□□□□□ -1.68
XKS1	YGR194C	SPO16	P17122	198 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	MRE11	P32829	692 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
XKS1	YGR194C	UBP5	P39944	805 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	FAA4	P47912	694 aa	Known RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	YGR021W	P53212	290 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	COG6	P53959	839 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	YNL040W	P53960	456 aa	Predicted RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	KRE28	Q04431	385 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	TMA64	Q04600	565 aa	Known RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	YPL066W	Q12194	479 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	RPL11A	P0C0W9	174 aa	Known RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	NAT1	P12945	854 aa	Known RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	DBP2	P24783	546 aa	Known RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	EFT1	P32324	842 aa	Known RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	MOT2	P34909	587 aa	Known RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	MYO3	P36006	1272 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	PPS1	P38148	807 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	RCK2	P38623	610 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	NUP60	P39705	539 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	MXR1	P40029	184 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	RSC8	P43609	557 aa	Known RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	NMD5	P46970	1048 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	YGR153W	P48238	217 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	FMS1	P50264	508 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	ASE1	P50275	885 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	ZIP2	P53061	704 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	UBX4	P54730	416 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	MDM1	Q01846	1127 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	ATG17	Q06410	417 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	PIN2	Q12057	282 aa		4.56	□□□□□ -1.68
XKS1	YGR194C	RPL11B	Q3E757	174 aa	Predicted RBP	4.56	□□□□□ -1.68
XKS1	YGR194C	FOB1	O13329	566 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	CYB2	P00175	591 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	INO1	P11986	533 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	CLN3	P13365	580 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	BUD2	P33314	1104 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	SAS3	P34218	831 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	THI80	P35202	319 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	YKL050C	P35736	922 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	YKR078W	P36158	585 aa	Known RBP	4.55	□□□□□ -1.68
XKS1	YGR194C	EXO84	P38261	753 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	SIP5	P40210	489 aa	Known RBP	4.55	□□□□□ -1.68
XKS1	YGR194C	THI6	P41835	540 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	GPD2	P41911	440 aa	Known RBP	4.55	□□□□□ -1.68
XKS1	YGR194C	RIM8	P53179	542 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	ASI1	P54074	624 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	TDA9	Q04545	1251 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	CSM3	Q04659	317 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	THI3	Q07471	609 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	VHS3	Q08438	674 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	ACM1	Q08981	209 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	CLF1	Q12309	687 aa	Predicted RBP	4.55	□□□□□ -1.68
XKS1	YGR194C	IES3	Q12345	250 aa		4.55	□□□□□ -1.68
XKS1	YGR194C	YLR462W	O13556	202 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	SNA3	P14359	133 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	GRX1	P25373	110 aa	Known RBP	4.54	□□□□□ -1.68
XKS1	YGR194C	GPI10	P30777	616 aa		4.54	□□□□□ -1.68

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