RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C CPA2P03965 1118 aaKnown RBP3.42□□□□□ -1.86
XRN1YGL173C HOM3P10869 527 aa3.42□□□□□ -1.86
XRN1YGL173C DIT1P21623 536 aa3.42□□□□□ -1.86
XRN1YGL173C MEI5P32489 222 aa3.42□□□□□ -1.86
XRN1YGL173C YKU70P32807 602 aa3.42□□□□□ -1.86
XRN1YGL173C ECM21P38167 1117 aaKnown RBP3.42□□□□□ -1.86
XRN1YGL173C PES4P39684 611 aa3.42□□□□□ -1.86
XRN1YGL173C SMK1P41808 388 aa3.42□□□□□ -1.86
XRN1YGL173C GPD2P41911 440 aaKnown RBP3.42□□□□□ -1.86
XRN1YGL173C MON1P53129 644 aa3.42□□□□□ -1.86
XRN1YGL173C LSC2P53312 427 aa3.42□□□□□ -1.86
XRN1YGL173C DUS3Q06053 668 aaKnown RBP3.42□□□□□ -1.86
XRN1YGL173C APL4Q12028 832 aa3.42□□□□□ -1.86
XRN1YGL173C PGS1P25578 521 aa3.42□□□□□ -1.86
XRN1YGL173C SPC110P32380 944 aa3.42□□□□□ -1.86
XRN1YGL173C EFB1P32471 206 aaKnown RBP3.42□□□□□ -1.86
XRN1YGL173C BEM3P32873 1128 aa3.42□□□□□ -1.86
XRN1YGL173C DAD2P36162 133 aa3.42□□□□□ -1.86
XRN1YGL173C CCL1P37366 393 aa3.42□□□□□ -1.86
XRN1YGL173C NPR2P39923 615 aa3.42□□□□□ -1.86
XRN1YGL173C LAM5P43560 674 aa3.42□□□□□ -1.86
XRN1YGL173C EOS1P53938 366 aa3.42□□□□□ -1.86
XRN1YGL173C GPD1Q00055 391 aaKnown RBP3.42□□□□□ -1.86
XRN1YGL173C RRB1Q04225 511 aaKnown RBP3.42□□□□□ -1.86
XRN1YGL173C BAG7Q12128 409 aa3.42□□□□□ -1.86
XRN1YGL173C RUP1Q12242 671 aa3.42□□□□□ -1.86
XRN1YGL173C NSI1Q12457 570 aa3.42□□□□□ -1.86
XRN1YGL173C MSH1P25846 959 aa3.42□□□□□ -1.86
XRN1YGL173C SYN8P31377 255 aa3.42□□□□□ -1.86
XRN1YGL173C PRO1P32264 428 aa3.42□□□□□ -1.86
XRN1YGL173C IME2P32581 645 aa3.42□□□□□ -1.86
XRN1YGL173C MDL1P33310 695 aa3.42□□□□□ -1.86
XRN1YGL173C UBP9P39967 754 aa3.42□□□□□ -1.86
XRN1YGL173C PRK1P40494 810 aa3.42□□□□□ -1.86
XRN1YGL173C RCM1P53972 490 aa3.42□□□□□ -1.86
XRN1YGL173C ADY4Q05955 493 aa3.42□□□□□ -1.86
XRN1YGL173C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
XRN1YGL173C MED2Q12124 431 aa3.42□□□□□ -1.86
XRN1YGL173C YML133CQ03099 1374 aa3.42□□□□□ -1.86
XRN1YGL173C YLL067CQ07888 1374 aa3.42□□□□□ -1.86
XRN1YGL173C YLL066CQ99208 1374 aa3.42□□□□□ -1.86
XRN1YGL173C VPS34P22543 875 aa3.41□□□□□ -1.86
XRN1YGL173C PRP28P23394 588 aa3.41□□□□□ -1.86
XRN1YGL173C NPP1P25353 742 aa3.41□□□□□ -1.86
XRN1YGL173C MTC7P32633 139 aa3.41□□□□□ -1.86
XRN1YGL173C IMA5P40884 581 aa3.41□□□□□ -1.86
XRN1YGL173C YJR098CP47139 656 aa3.41□□□□□ -1.86
XRN1YGL173C MNT2P53059 558 aa3.41□□□□□ -1.86
XRN1YGL173C MMR1Q06324 491 aa3.41□□□□□ -1.86
XRN1YGL173C ESC8Q08119 714 aa3.41□□□□□ -1.86
XRN1YGL173C RCN2Q12044 265 aa3.41□□□□□ -1.86
XRN1YGL173C PFK1P16861 987 aaKnown RBP3.41□□□□□ -1.86
XRN1YGL173C IME1P21190 360 aa3.41□□□□□ -1.86
XRN1YGL173C DBP2P24783 546 aaKnown RBP3.41□□□□□ -1.86
XRN1YGL173C NAM7P30771 971 aaKnown RBP3.41□□□□□ -1.86
XRN1YGL173C MKT1P40850 830 aaKnown RBP3.41□□□□□ -1.86
XRN1YGL173C RSC1P53236 928 aa3.41□□□□□ -1.86
XRN1YGL173C SNF12P53628 566 aa3.41□□□□□ -1.86
XRN1YGL173C BSC5P53755 489 aa3.41□□□□□ -1.86
XRN1YGL173C PEX13P80667 386 aa3.41□□□□□ -1.86
XRN1YGL173C YLR345WQ06137 509 aa3.41□□□□□ -1.86
XRN1YGL173C BUG1Q12191 341 aa3.41□□□□□ -1.86
XRN1YGL173C CEX1Q12453 761 aa3.41□□□□□ -1.86
XRN1YGL173C APN1P22936 367 aa3.41□□□□□ -1.86
XRN1YGL173C STE13P33894 931 aa3.41□□□□□ -1.86
XRN1YGL173C REI1P38344 393 aaPredicted RBP3.41□□□□□ -1.86
XRN1YGL173C HSM3P38348 480 aa3.41□□□□□ -1.86
XRN1YGL173C DUN1P39009 513 aa3.41□□□□□ -1.86
XRN1YGL173C BUD16P39988 312 aa3.41□□□□□ -1.86
XRN1YGL173C RTT105P40063 208 aa3.41□□□□□ -1.86
XRN1YGL173C RGI2P40188 164 aa3.41□□□□□ -1.86
XRN1YGL173C MRPL19P53875 158 aa3.41□□□□□ -1.86
XRN1YGL173C GIS4Q04233 774 aa3.41□□□□□ -1.86
XRN1YGL173C HRQ1Q05549 1077 aa3.41□□□□□ -1.86
XRN1YGL173C YDR306CQ06640 478 aa3.41□□□□□ -1.86
XRN1YGL173C VCX1Q99385 411 aa3.41□□□□□ -1.86
XRN1YGL173C CET1O13297 549 aaPredicted RBP3.41□□□□□ -1.86
XRN1YGL173C GYP6P32806 458 aa3.41□□□□□ -1.86
XRN1YGL173C PGM1P33401 570 aaKnown RBP3.41□□□□□ -1.86
XRN1YGL173C PAN5P38787 379 aa3.41□□□□□ -1.86
XRN1YGL173C SET5P38890 526 aaKnown RBP3.41□□□□□ -1.86
XRN1YGL173C YJL107CP42947 387 aa3.41□□□□□ -1.86
XRN1YGL173C UBP2Q01476 1272 aa3.41□□□□□ -1.86
XRN1YGL173C MSC3Q05812 728 aa3.41□□□□□ -1.86
XRN1YGL173C AIM6Q07716 390 aa3.41□□□□□ -1.86
XRN1YGL173C TY1B-AO13527 1196 aaKnown RBP3.4□□□□□ -1.86
XRN1YGL173C YSC84P32793 468 aa3.4□□□□□ -1.86
XRN1YGL173C SAH1P39954 449 aaKnown RBP3.4□□□□□ -1.86
XRN1YGL173C CIT3P43635 486 aa3.4□□□□□ -1.86
XRN1YGL173C SPP1Q03012 353 aa3.4□□□□□ -1.86
XRN1YGL173C MSC2Q03455 724 aa3.4□□□□□ -1.86
XRN1YGL173C SYF1Q04048 859 aaPredicted RBP3.4□□□□□ -1.86
XRN1YGL173C YOR022CQ12204 715 aa3.4□□□□□ -1.86
XRN1YGL173C COQ4O13525 335 aa3.4□□□□□ -1.87
XRN1YGL173C PHO5P00635 467 aa3.4□□□□□ -1.87
XRN1YGL173C DBP3P20447 523 aaKnown RBP3.4□□□□□ -1.87
XRN1YGL173C STE50P25344 346 aa3.4□□□□□ -1.87
XRN1YGL173C APM3P38153 483 aa3.4□□□□□ -1.87
XRN1YGL173C VPS45P38932 577 aa3.4□□□□□ -1.87
XRN1YGL173C REC102Q02721 264 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms