RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W YNR071CP53757 342 aa1.55□□□□□ -2.16
SMC1YFL008W UME1Q03010 460 aa1.55□□□□□ -2.16
SMC1YFL008W PKH1Q03407 766 aa1.55□□□□□ -2.16
SMC1YFL008W YMR206WQ03695 313 aa1.55□□□□□ -2.16
SMC1YFL008W ARO10Q06408 635 aa1.55□□□□□ -2.16
SMC1YFL008W POM34Q12445 299 aa1.55□□□□□ -2.16
SMC1YFL008W ADR1P07248 1323 aa1.55□□□□□ -2.16
SMC1YFL008W MCM3P24279 971 aaKnown RBP1.54□□□□□ -2.16
SMC1YFL008W GLG1P36143 616 aa1.54□□□□□ -2.16
SMC1YFL008W BUD16P39988 312 aa1.54□□□□□ -2.16
SMC1YFL008W EAF5P39995 279 aa1.54□□□□□ -2.16
SMC1YFL008W DUG1P43616 481 aaKnown RBP1.54□□□□□ -2.16
SMC1YFL008W MPS3P47069 682 aa1.54□□□□□ -2.16
SMC1YFL008W EAF7P53911 425 aaKnown RBP1.54□□□□□ -2.16
SMC1YFL008W REC102Q02721 264 aa1.54□□□□□ -2.16
SMC1YFL008W NRG1Q03125 231 aa1.54□□□□□ -2.16
SMC1YFL008W CRR1Q05790 422 aa1.54□□□□□ -2.16
SMC1YFL008W BRE1Q07457 700 aaKnown RBP1.54□□□□□ -2.16
SMC1YFL008W ACF2Q12168 779 aa1.54□□□□□ -2.16
SMC1YFL008W PMA2P19657 947 aa1.54□□□□□ -2.16
SMC1YFL008W ATG4P53867 494 aa1.54□□□□□ -2.16
SMC1YFL008W YNL034WP53963 612 aa1.54□□□□□ -2.16
SMC1YFL008W MCH5Q08777 521 aa1.54□□□□□ -2.16
SMC1YFL008W NDJ1Q12366 352 aa1.54□□□□□ -2.16
SMC1YFL008W TRZ1P36159 838 aaPredicted RBP1.54□□□□□ -2.16
SMC1YFL008W PZF1P39933 429 aa1.54□□□□□ -2.16
SMC1YFL008W NPY1P53164 384 aa1.54□□□□□ -2.16
SMC1YFL008W HLR1Q04429 423 aa1.54□□□□□ -2.16
SMC1YFL008W PCL8Q08966 492 aa1.54□□□□□ -2.16
SMC1YFL008W MSS18P08593 268 aa1.53□□□□□ -2.16
SMC1YFL008W ARP1P38696 384 aa1.53□□□□□ -2.16
SMC1YFL008W DSS1P39112 969 aa1.53□□□□□ -2.16
SMC1YFL008W EXO1P39875 702 aa1.53□□□□□ -2.16
SMC1YFL008W VID28P40547 921 aa1.53□□□□□ -2.16
SMC1YFL008W MOT3P54785 490 aaKnown RBP1.53□□□□□ -2.16
SMC1YFL008W FDC1Q03034 503 aa1.53□□□□□ -2.16
SMC1YFL008W POB3Q04636 552 aaKnown RBP1.53□□□□□ -2.16
SMC1YFL008W ECM38Q05902 660 aaPredicted RBP1.53□□□□□ -2.16
SMC1YFL008W AIM39Q08223 395 aa1.53□□□□□ -2.16
SMC1YFL008W YLR111WQ12528 110 aa1.53□□□□□ -2.16
SMC1YFL008W YER190C-BP0CX94 160 aa1.53□□□□□ -2.16
SMC1YFL008W YEL077W-AP0CX95 160 aa1.53□□□□□ -2.16
SMC1YFL008W YGR296C-BP0CX96 160 aa1.53□□□□□ -2.16
SMC1YFL008W YPL283W-BP0CX97 160 aa1.53□□□□□ -2.16
SMC1YFL008W YPR204C-AP0CX98 160 aa1.53□□□□□ -2.16
SMC1YFL008W ARG1P22768 420 aa1.53□□□□□ -2.16
SMC1YFL008W PRP28P23394 588 aa1.53□□□□□ -2.16
SMC1YFL008W FUB1P25659 250 aa1.53□□□□□ -2.16
SMC1YFL008W CDC1P40986 491 aa1.53□□□□□ -2.16
SMC1YFL008W YNR061CP53747 219 aa1.53□□□□□ -2.16
SMC1YFL008W YML122CQ03207 126 aa1.53□□□□□ -2.16
SMC1YFL008W EFR3Q03653 782 aaKnown RBP1.53□□□□□ -2.16
SMC1YFL008W NSE5Q03718 556 aa1.53□□□□□ -2.16
SMC1YFL008W YOR378WQ08902 515 aa1.53□□□□□ -2.16
SMC1YFL008W SLX4Q12098 748 aa1.53□□□□□ -2.16
SMC1YFL008W RPS17AP02407 136 aaKnown RBP1.53□□□□□ -2.17
SMC1YFL008W RPS17BP14127 136 aaKnown RBP1.53□□□□□ -2.17
SMC1YFL008W MRK1P50873 501 aa1.53□□□□□ -2.17
SMC1YFL008W COS12P53053 380 aa1.53□□□□□ -2.17
SMC1YFL008W YGR054WP53235 642 aaKnown RBP1.53□□□□□ -2.17
SMC1YFL008W PEX8P53248 589 aa1.53□□□□□ -2.17
SMC1YFL008W ARA2Q04212 335 aa1.53□□□□□ -2.17
SMC1YFL008W YTM1Q12024 460 aaPredicted RBP1.53□□□□□ -2.17
SMC1YFL008W CHS5Q12114 671 aaKnown RBP1.53□□□□□ -2.17
SMC1YFL008W USV1Q12132 391 aa1.53□□□□□ -2.17
SMC1YFL008W AMD2P22580 549 aa1.52□□□□□ -2.17
SMC1YFL008W COS111P38308 924 aa1.52□□□□□ -2.17
SMC1YFL008W BDH2P39713 417 aa1.52□□□□□ -2.17
SMC1YFL008W IMA5P40884 581 aa1.52□□□□□ -2.17
SMC1YFL008W MTR3P48240 250 aaPredicted RBP1.52□□□□□ -2.17
SMC1YFL008W SAP4P53036 818 aa1.52□□□□□ -2.17
SMC1YFL008W RIA1P53893 1110 aa1.52□□□□□ -2.17
SMC1YFL008W PCT1P13259 424 aa1.52□□□□□ -2.17
SMC1YFL008W CAD1P24813 409 aaKnown RBP1.52□□□□□ -2.17
SMC1YFL008W YSP3P25036 478 aa1.52□□□□□ -2.17
SMC1YFL008W LEU5P38702 357 aa1.52□□□□□ -2.17
SMC1YFL008W TPO2P53283 614 aa1.52□□□□□ -2.17
SMC1YFL008W YGR151CP53287 111 aa1.52□□□□□ -2.17
SMC1YFL008W GUD1Q07729 489 aa1.52□□□□□ -2.17
SMC1YFL008W NGL1Q08213 363 aaKnown RBP1.52□□□□□ -2.17
SMC1YFL008W KSP1P38691 1029 aaKnown RBP1.52□□□□□ -2.17
SMC1YFL008W RIX1P38883 763 aaPredicted RBP1.52□□□□□ -2.17
SMC1YFL008W YEL020CP39994 560 aa1.52□□□□□ -2.17
SMC1YFL008W YGR237CP50089 785 aa1.52□□□□□ -2.17
SMC1YFL008W UBA2P52488 636 aa1.52□□□□□ -2.17
SMC1YFL008W HRD3Q05787 833 aa1.52□□□□□ -2.17
SMC1YFL008W ISA1Q07821 250 aaPredicted RBP1.52□□□□□ -2.17
SMC1YFL008W BMS1Q08965 1183 aaKnown RBP1.52□□□□□ -2.17
SMC1YFL008W RKI1Q12189 258 aa1.52□□□□□ -2.17
SMC1YFL008W PRS5Q12265 496 aaKnown RBP1.52□□□□□ -2.17
SMC1YFL008W CNE1P27825 502 aa1.51□□□□□ -2.17
SMC1YFL008W TDP1P38319 544 aa1.51□□□□□ -2.17
SMC1YFL008W PCL5P38794 229 aa1.51□□□□□ -2.17
SMC1YFL008W NDC80P40460 691 aa1.51□□□□□ -2.17
SMC1YFL008W SAE2P46946 345 aa1.51□□□□□ -2.17
SMC1YFL008W BNA1P47096 177 aa1.51□□□□□ -2.17
SMC1YFL008W SDA1P53313 767 aaKnown RBP1.51□□□□□ -2.17
SMC1YFL008W MTD1Q02046 320 aaKnown RBP1.51□□□□□ -2.17
SMC1YFL008W ZRT2Q12436 422 aa1.51□□□□□ -2.17
SMC1YFL008W YOR131CQ12486 218 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms