RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W GSY2P27472 705 aa5.53□□□□□ -1.52
UBP9YER098W YKR075CP36155 307 aa5.53□□□□□ -1.52
UBP9YER098W MAD3P47074 515 aa5.53□□□□□ -1.52
UBP9YER098W RAI1P53063 387 aaKnown RBP5.53□□□□□ -1.52
UBP9YER098W ARC35P53731 342 aaKnown RBP5.53□□□□□ -1.52
UBP9YER098W BRE5P53741 515 aaKnown RBP5.53□□□□□ -1.52
UBP9YER098W EIS1Q05050 843 aaKnown RBP5.53□□□□□ -1.52
UBP9YER098W YCG1Q06680 1035 aa5.53□□□□□ -1.52
UBP9YER098W APL5Q08951 932 aaKnown RBP5.53□□□□□ -1.52
UBP9YER098W ARG1P22768 420 aa5.53□□□□□ -1.52
UBP9YER098W TRK2P28584 889 aa5.53□□□□□ -1.52
UBP9YER098W SEC66P33754 206 aa5.53□□□□□ -1.52
UBP9YER098W RRP1P35178 278 aaPredicted RBP5.53□□□□□ -1.52
UBP9YER098W BLI1P35727 113 aa5.53□□□□□ -1.52
UBP9YER098W YHR202WP38887 602 aa5.53□□□□□ -1.52
UBP9YER098W VPS8P39702 1274 aa5.53□□□□□ -1.52
UBP9YER098W STL1P39932 569 aa5.53□□□□□ -1.52
UBP9YER098W YLR407WQ06070 228 aa5.53□□□□□ -1.52
UBP9YER098W NFI1Q12216 726 aa5.53□□□□□ -1.52
UBP9YER098W RPO41P13433 1351 aaKnown RBP5.52□□□□□ -1.53
UBP9YER098W PMR1P13586 950 aa5.52□□□□□ -1.53
UBP9YER098W SAN1P22470 610 aa5.52□□□□□ -1.53
UBP9YER098W SCS2P40075 244 aaKnown RBP5.52□□□□□ -1.53
UBP9YER098W SMK1P41808 388 aa5.52□□□□□ -1.53
UBP9YER098W MIC19P43594 170 aa5.52□□□□□ -1.53
UBP9YER098W IRC5P43610 853 aa5.52□□□□□ -1.53
UBP9YER098W MTD1Q02046 320 aaKnown RBP5.52□□□□□ -1.53
UBP9YER098W PSF3Q12146 194 aa5.52□□□□□ -1.53
UBP9YER098W SEC7P11075 2009 aaKnown RBP5.52□□□□□ -1.53
UBP9YER098W PDB1P32473 366 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W NGG1P32494 702 aa5.51□□□□□ -1.53
UBP9YER098W SBE2P42223 864 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W YJR079WP47126 109 aa5.51□□□□□ -1.53
UBP9YER098W DSD1P53095 428 aa5.51□□□□□ -1.53
UBP9YER098W DUS1P53759 423 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W GPD1Q00055 391 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W LEE1Q02799 301 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W SSL1Q04673 461 aaPredicted RBP5.51□□□□□ -1.53
UBP9YER098W ADH4P10127 382 aa5.51□□□□□ -1.53
UBP9YER098W RPS0AP32905 252 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W SEG2P34250 1132 aa5.51□□□□□ -1.53
UBP9YER098W SDS22P36047 338 aa5.51□□□□□ -1.53
UBP9YER098W SRP68P38687 599 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W PPE1P38796 400 aa5.51□□□□□ -1.53
UBP9YER098W BEM4P39011 633 aa5.51□□□□□ -1.53
UBP9YER098W YIL108WP40483 696 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W RCM1P53972 490 aa5.51□□□□□ -1.53
UBP9YER098W TIM11P81449 96 aaPredicted RBP5.51□□□□□ -1.53
UBP9YER098W STE23Q06010 1027 aa5.51□□□□□ -1.53
UBP9YER098W CIR2Q08822 631 aa5.51□□□□□ -1.53
UBP9YER098W RPA190P10964 1664 aaKnown RBP5.51□□□□□ -1.53
UBP9YER098W PDR18P53756 1333 aa5.51□□□□□ -1.53
UBP9YER098W SRO9P25567 434 aaKnown RBP5.5□□□□□ -1.53
UBP9YER098W SRP101P32916 621 aa5.5□□□□□ -1.53
UBP9YER098W TFG2P41896 400 aaPredicted RBP5.5□□□□□ -1.53
UBP9YER098W TRS85P46944 698 aa5.5□□□□□ -1.53
UBP9YER098W ILM1P47155 203 aa5.5□□□□□ -1.53
UBP9YER098W PUS4P48567 403 aaKnown RBP5.5□□□□□ -1.53
UBP9YER098W VPS75P53853 264 aa5.5□□□□□ -1.53
UBP9YER098W JJJ1P53863 590 aa5.5□□□□□ -1.53
UBP9YER098W RSC58Q07979 502 aa5.5□□□□□ -1.53
UBP9YER098W GAS5Q08193 484 aa5.5□□□□□ -1.53
UBP9YER098W TMA16Q08687 178 aa5.5□□□□□ -1.53
UBP9YER098W ENT1Q12518 454 aa5.5□□□□□ -1.53
UBP9YER098W RPS19AP07280 144 aaKnown RBP5.5□□□□□ -1.53
UBP9YER098W RPS19BP07281 144 aaPredicted RBP5.5□□□□□ -1.53
UBP9YER098W CLB4P24871 460 aa5.5□□□□□ -1.53
UBP9YER098W SLC1P33333 303 aa5.5□□□□□ -1.53
UBP9YER098W TGL1P34163 548 aa5.5□□□□□ -1.53
UBP9YER098W AAP1P37898 856 aaKnown RBP5.5□□□□□ -1.53
UBP9YER098W MAL33P38157 468 aa5.5□□□□□ -1.53
UBP9YER098W SWD1P39706 426 aa5.5□□□□□ -1.53
UBP9YER098W AIM20P40451 204 aa5.5□□□□□ -1.53
UBP9YER098W YRB1P41920 201 aaKnown RBP5.5□□□□□ -1.53
UBP9YER098W YDR444WQ04093 687 aa5.5□□□□□ -1.53
UBP9YER098W RIM20Q12033 661 aa5.5□□□□□ -1.53
UBP9YER098W GCD2P12754 651 aaPredicted RBP5.49□□□□□ -1.53
UBP9YER098W NCP1P16603 691 aaKnown RBP5.49□□□□□ -1.53
UBP9YER098W BUD14P27637 709 aa5.49□□□□□ -1.53
UBP9YER098W SWC3P31376 625 aa5.49□□□□□ -1.53
UBP9YER098W RAD24P32641 659 aa5.49□□□□□ -1.53
UBP9YER098W LOS1P33418 1100 aaPredicted RBP5.49□□□□□ -1.53
UBP9YER098W YMR124WP39523 943 aaKnown RBP5.49□□□□□ -1.53
UBP9YER098W MRX1P40050 688 aa5.49□□□□□ -1.53
UBP9YER098W KAP123P40069 1113 aaKnown RBP5.49□□□□□ -1.53
UBP9YER098W IMA5P40884 581 aa5.49□□□□□ -1.53
UBP9YER098W VID30P53076 958 aa5.49□□□□□ -1.53
UBP9YER098W TAP42Q04372 366 aa5.49□□□□□ -1.53
UBP9YER098W RPS17AP02407 136 aaKnown RBP5.49□□□□□ -1.53
UBP9YER098W YEL076C-AP0CX16 216 aa5.49□□□□□ -1.53
UBP9YER098W YLR464WP0CX17 216 aa5.49□□□□□ -1.53
UBP9YER098W RPS17BP14127 136 aaKnown RBP5.49□□□□□ -1.53
UBP9YER098W AAC3P18238 307 aa5.49□□□□□ -1.53
UBP9YER098W ADP1P25371 1049 aa5.49□□□□□ -1.53
UBP9YER098W RAD16P31244 790 aa5.49□□□□□ -1.53
UBP9YER098W XRS2P33301 854 aa5.49□□□□□ -1.53
UBP9YER098W MDL2P33311 773 aa5.49□□□□□ -1.53
UBP9YER098W AKL1P38080 1108 aaKnown RBP5.49□□□□□ -1.53
UBP9YER098W YEL076CP39971 216 aa5.49□□□□□ -1.53
UBP9YER098W PUG1P40100 303 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms