RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W HER2Q03557 464 aa8.12□□□□□ -1.11
SHC1YER096W USA1Q03714 838 aa8.12□□□□□ -1.11
SHC1YER096W SDH5Q08230 162 aa8.12□□□□□ -1.11
SHC1YER096W LCB4Q12246 624 aa8.12□□□□□ -1.11
SHC1YER096W ATP1P07251 545 aaKnown RBP8.11□□□□□ -1.11
SHC1YER096W RPB2P08518 1224 aaKnown RBP8.11□□□□□ -1.11
SHC1YER096W POP4P38336 279 aa8.11□□□□□ -1.11
SHC1YER096W CCT2P39076 527 aaKnown RBP8.11□□□□□ -1.11
SHC1YER096W SPG3Q04398 127 aaPredicted RBP8.11□□□□□ -1.11
SHC1YER096W AIM32Q04689 311 aa8.11□□□□□ -1.11
SHC1YER096W ECM22Q05958 814 aaPredicted RBP8.11□□□□□ -1.11
SHC1YER096W STE23Q06010 1027 aa8.11□□□□□ -1.11
SHC1YER096W MRI1Q06489 411 aaKnown RBP8.11□□□□□ -1.11
SHC1YER096W FMP25Q08023 583 aa8.11□□□□□ -1.11
SHC1YER096W CIR2Q08822 631 aa8.11□□□□□ -1.11
SHC1YER096W SPO16P17122 198 aa8.1□□□□□ -1.11
SHC1YER096W SPT5P27692 1063 aaKnown RBP8.1□□□□□ -1.11
SHC1YER096W FMP10P40098 244 aa8.1□□□□□ -1.11
SHC1YER096W INA22P40576 216 aa8.1□□□□□ -1.11
SHC1YER096W RGD2P43556 714 aa8.1□□□□□ -1.11
SHC1YER096W RSC8P43609 557 aaKnown RBP8.1□□□□□ -1.11
SHC1YER096W URB2P47108 1174 aa8.1□□□□□ -1.11
SHC1YER096W YNL247WP53852 767 aaKnown RBP8.1□□□□□ -1.11
SHC1YER096W ARA2Q04212 335 aa8.1□□□□□ -1.11
SHC1YER096W YML083CQ04526 418 aa8.1□□□□□ -1.11
SHC1YER096W UTP13Q05946 817 aaKnown RBP8.1□□□□□ -1.11
SHC1YER096W MRN1Q08925 612 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
SHC1YER096W TAF10Q12030 206 aa8.1□□□□□ -1.11
SHC1YER096W AVL9Q12500 764 aa8.1□□□□□ -1.11
SHC1YER096W CMD1P06787 147 aaKnown RBP8.09□□□□□ -1.11
SHC1YER096W ADH4P10127 382 aa8.09□□□□□ -1.11
SHC1YER096W MAS1P10507 462 aa8.09□□□□□ -1.11
SHC1YER096W MSH1P25846 959 aa8.09□□□□□ -1.11
SHC1YER096W CDC20P26309 610 aa8.09□□□□□ -1.11
SHC1YER096W MET4P32389 672 aa8.09□□□□□ -1.11
SHC1YER096W VPH1P32563 840 aaKnown RBP8.09□□□□□ -1.11
SHC1YER096W HSP78P33416 811 aa8.09□□□□□ -1.11
SHC1YER096W ALA1P40825 983 aaKnown RBP8.09□□□□□ -1.11
SHC1YER096W TAF1P46677 1066 aa8.09□□□□□ -1.11
SHC1YER096W MET13P53128 600 aa8.09□□□□□ -1.11
SHC1YER096W CEG1Q01159 459 aaPredicted RBP8.09□□□□□ -1.11
SHC1YER096W YMR160WQ03823 816 aa8.09□□□□□ -1.11
SHC1YER096W CDC73Q06697 393 aa8.09□□□□□ -1.11
SHC1YER096W TEF1P02994 458 aaKnown RBP8.08□□□□□ -1.12
SHC1YER096W MET16P18408 261 aaPredicted RBP8.08□□□□□ -1.12
SHC1YER096W PEX1P24004 1043 aa8.08□□□□□ -1.12
SHC1YER096W PGS1P25578 521 aa8.08□□□□□ -1.12
SHC1YER096W YKR051WP36142 418 aa8.08□□□□□ -1.12
SHC1YER096W AIM18P38884 321 aa8.08□□□□□ -1.12
SHC1YER096W TAH11P47112 604 aa8.08□□□□□ -1.12
SHC1YER096W HLJ1P48353 224 aa8.08□□□□□ -1.12
SHC1YER096W PEX31P53203 462 aa8.08□□□□□ -1.12
SHC1YER096W CPR6P53691 371 aaKnown RBP8.08□□□□□ -1.12
SHC1YER096W DMA2P53924 522 aa8.08□□□□□ -1.12
SHC1YER096W FRA1Q07825 749 aa8.08□□□□□ -1.12
SHC1YER096W YLL056CQ12177 298 aa8.08□□□□□ -1.12
SHC1YER096W CCP1P00431 361 aa8.08□□□□□ -1.12
SHC1YER096W RGR1P19263 1082 aa8.08□□□□□ -1.12
SHC1YER096W YIH1P25637 258 aa8.08□□□□□ -1.12
SHC1YER096W RAD27P26793 382 aa8.08□□□□□ -1.12
SHC1YER096W URK1P27515 501 aa8.08□□□□□ -1.12
SHC1YER096W DAL1P32375 460 aa8.08□□□□□ -1.12
SHC1YER096W YBP1P38315 674 aa8.08□□□□□ -1.12
SHC1YER096W PPE1P38796 400 aa8.08□□□□□ -1.12
SHC1YER096W ATM1P40416 690 aa8.08□□□□□ -1.12
SHC1YER096W VTC4P47075 721 aa8.08□□□□□ -1.12
SHC1YER096W RFX1P48743 811 aa8.08□□□□□ -1.12
SHC1YER096W YGR127WP53275 312 aa8.08□□□□□ -1.12
SHC1YER096W GCN5Q03330 439 aa8.08□□□□□ -1.12
SHC1YER096W PIG1Q06216 648 aa8.08□□□□□ -1.12
SHC1YER096W TPO1Q07824 586 aa8.08□□□□□ -1.12
SHC1YER096W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
SHC1YER096W ARP7Q12406 477 aa8.08□□□□□ -1.12
SHC1YER096W POL3P15436 1097 aa8.07□□□□□ -1.12
SHC1YER096W UTR2P32623 467 aa8.07□□□□□ -1.12
SHC1YER096W YBR225WP38321 900 aa8.07□□□□□ -1.12
SHC1YER096W STB5P38699 743 aa8.07□□□□□ -1.12
SHC1YER096W DIA4P38705 446 aaPredicted RBP8.07□□□□□ -1.12
SHC1YER096W MSR1P38714 643 aa8.07□□□□□ -1.12
SHC1YER096W FSH1P38777 243 aaKnown RBP8.07□□□□□ -1.12
SHC1YER096W CKB2P38930 258 aa8.07□□□□□ -1.12
SHC1YER096W SNG1P46950 547 aa8.07□□□□□ -1.12
SHC1YER096W ZIP2P53061 704 aa8.07□□□□□ -1.12
SHC1YER096W MTD1Q02046 320 aaKnown RBP8.07□□□□□ -1.12
SHC1YER096W PIR3Q03180 325 aa8.07□□□□□ -1.12
SHC1YER096W SND1Q04007 877 aa8.07□□□□□ -1.12
SHC1YER096W AAD4Q07747 329 aa8.07□□□□□ -1.12
SHC1YER096W APC5Q08683 685 aa8.07□□□□□ -1.12
SHC1YER096W GPM3Q12326 303 aa8.07□□□□□ -1.12
SHC1YER096W SEY1Q99287 776 aa8.07□□□□□ -1.12
SHC1YER096W ILV2P07342 687 aaKnown RBP8.06□□□□□ -1.12
SHC1YER096W IMA3P0CW40 589 aa8.06□□□□□ -1.12
SHC1YER096W IMA4P0CW41 589 aa8.06□□□□□ -1.12
SHC1YER096W KGD2P19262 463 aaPredicted RBP8.06□□□□□ -1.12
SHC1YER096W YME1P32795 747 aa8.06□□□□□ -1.12
SHC1YER096W OAF3P36023 863 aa8.06□□□□□ -1.12
SHC1YER096W BIT2P38346 545 aa8.06□□□□□ -1.12
SHC1YER096W STL1P39932 569 aa8.06□□□□□ -1.12
SHC1YER096W SCC4P40090 624 aa8.06□□□□□ -1.12
SHC1YER096W CNN1P43618 361 aa8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms