RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W TUP1P16649 713 aa3.38□□□□□ -1.87
SSF2YDR312W ACO1P19414 778 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SSF2YDR312W SAT4P25333 603 aaKnown RBP3.38□□□□□ -1.87
SSF2YDR312W DGR2P32330 852 aa3.38□□□□□ -1.87
SSF2YDR312W MTC7P32633 139 aa3.38□□□□□ -1.87
SSF2YDR312W YHR033WP38690 423 aa3.38□□□□□ -1.87
SSF2YDR312W CRG1P38892 291 aaRIP-Chip data3.38□□□□□ -1.87not detected
SSF2YDR312W TMN3P40071 706 aa3.38□□□□□ -1.87
SSF2YDR312W PRM2P40534 656 aa3.38□□□□□ -1.87
SSF2YDR312W ASN1P49089 572 aaKnown RBP3.38□□□□□ -1.87
SSF2YDR312W SPO1P53541 631 aa3.38□□□□□ -1.87
SSF2YDR312W SNF12P53628 566 aa3.38□□□□□ -1.87
SSF2YDR312W TIM50Q02776 476 aa3.38□□□□□ -1.87
SSF2YDR312W UFO1Q04511 668 aa3.38□□□□□ -1.87
SSF2YDR312W NGL1Q08213 363 aaKnown RBP3.38□□□□□ -1.87
SSF2YDR312W AFT2Q08957 416 aa3.38□□□□□ -1.87
SSF2YDR312W MMS22Q06164 1454 aa3.37□□□□□ -1.87
SSF2YDR312W ESP1Q03018 1630 aa3.37□□□□□ -1.87
SSF2YDR312W ADE5,7P07244 802 aaKnown RBP3.37□□□□□ -1.87
SSF2YDR312W COX11P19516 300 aaKnown RBP3.37□□□□□ -1.87
SSF2YDR312W HEM12P32347 362 aaPredicted RBP3.37□□□□□ -1.87
SSF2YDR312W UGP1P32861 499 aaKnown RBP3.37□□□□□ -1.87
SSF2YDR312W TFC4P33339 1025 aa3.37□□□□□ -1.87
SSF2YDR312W ELF1P36053 145 aa3.37□□□□□ -1.87
SSF2YDR312W FTR1P40088 404 aa3.37□□□□□ -1.87
SSF2YDR312W SPC105P53148 917 aa3.37□□□□□ -1.87
SSF2YDR312W YDR179W-AQ03983 463 aa3.37□□□□□ -1.87
SSF2YDR312W ECM38Q05902 660 aaPredicted RBP3.37□□□□□ -1.87
SSF2YDR312W MDM20Q12387 796 aaKnown RBP3.37□□□□□ -1.87
SSF2YDR312W TPK2P06245 380 aa3.36□□□□□ -1.87
SSF2YDR312W MRC1P25588 1096 aa3.36□□□□□ -1.87
SSF2YDR312W YMC1P32331 307 aa3.36□□□□□ -1.87
SSF2YDR312W PLC1P32383 869 aa3.36□□□□□ -1.87
SSF2YDR312W FMP30Q02883 468 aa3.36□□□□□ -1.87
SSF2YDR312W FDC1Q03034 503 aa3.36□□□□□ -1.87
SSF2YDR312W NGL2Q03264 515 aaKnown RBP3.36□□□□□ -1.87
SSF2YDR312W TY1B-BRQ12193 1756 aa3.35□□□□□ -1.87
SSF2YDR312W TY1B-GR3Q12316 1755 aa3.35□□□□□ -1.87
SSF2YDR312W TY1B-ORQ92393 1755 aa3.35□□□□□ -1.87
SSF2YDR312W RMA1P36001 430 aaKnown RBP3.35□□□□□ -1.87
SSF2YDR312W EHT1P38295 451 aa3.35□□□□□ -1.87
SSF2YDR312W SRP68P38687 599 aaKnown RBP3.35□□□□□ -1.87
SSF2YDR312W PEA2P40091 420 aa3.35□□□□□ -1.87
SSF2YDR312W IRC5P43610 853 aa3.35□□□□□ -1.87
SSF2YDR312W ENP2P48234 707 aaKnown RBP3.35□□□□□ -1.87
SSF2YDR312W YDL183CP48569 320 aa3.35□□□□□ -1.87
SSF2YDR312W PEX14P53112 341 aa3.35□□□□□ -1.87
SSF2YDR312W SLD3P53135 668 aa3.35□□□□□ -1.87
SSF2YDR312W RIM13Q03792 727 aa3.35□□□□□ -1.87
SSF2YDR312W SEG1Q04279 960 aa3.35□□□□□ -1.87
SSF2YDR312W ULA1Q12059 462 aa3.35□□□□□ -1.87
SSF2YDR312W YRF1-1P0CX20 1796 aa3.34□□□□□ -1.87
SSF2YDR312W YRF1-5P0CX21 1796 aa3.34□□□□□ -1.87
SSF2YDR312W YRF1-8P0CX22 1796 aa3.34□□□□□ -1.87
SSF2YDR312W YEL076C-AP0CX16 216 aa3.34□□□□□ -1.88
SSF2YDR312W YLR464WP0CX17 216 aa3.34□□□□□ -1.88
SSF2YDR312W ERG11P10614 530 aa3.34□□□□□ -1.88
SSF2YDR312W HMG2P12684 1045 aa3.34□□□□□ -1.88
SSF2YDR312W STE4P18851 423 aa3.34□□□□□ -1.88
SSF2YDR312W YEL076CP39971 216 aa3.34□□□□□ -1.88
SSF2YDR312W EAF5P39995 279 aa3.34□□□□□ -1.88
SSF2YDR312W YGR054WP53235 642 aaKnown RBP3.34□□□□□ -1.88
SSF2YDR312W DAK1P54838 584 aaKnown RBP3.34□□□□□ -1.88
SSF2YDR312W HLR1Q04429 423 aa3.34□□□□□ -1.88
SSF2YDR312W YCG1Q06680 1035 aa3.34□□□□□ -1.88
SSF2YDR312W YOR378WQ08902 515 aa3.34□□□□□ -1.88
SSF2YDR312W CWC2Q12046 339 aaPredicted RBP3.34□□□□□ -1.88
SSF2YDR312W TOP2P06786 1428 aaKnown RBP3.34□□□□□ -1.88
SSF2YDR312W KAR1P11927 433 aa3.33□□□□□ -1.88
SSF2YDR312W PPE1P38796 400 aa3.33□□□□□ -1.88
SSF2YDR312W THI6P41835 540 aa3.33□□□□□ -1.88
SSF2YDR312W YGL117WP53133 265 aa3.33□□□□□ -1.88
SSF2YDR312W ARG7Q04728 441 aa3.33□□□□□ -1.88
SSF2YDR312W ICT1Q12385 394 aa3.33□□□□□ -1.88
SSF2YDR312W MRPL7P36519 292 aa3.32□□□□□ -1.88
SSF2YDR312W EMP65P40085 556 aa3.32□□□□□ -1.88
SSF2YDR312W TAX4P47030 604 aa3.32□□□□□ -1.88
SSF2YDR312W PEF1P53238 335 aa3.32□□□□□ -1.88
SSF2YDR312W CPR8P53728 308 aa3.32□□□□□ -1.88
SSF2YDR312W SQS1P53866 767 aaKnown RBP3.32□□□□□ -1.88
SSF2YDR312W MTD1Q02046 320 aaKnown RBP3.32□□□□□ -1.88
SSF2YDR312W EFR3Q03653 782 aaKnown RBP3.32□□□□□ -1.88
SSF2YDR312W TRS23Q03784 219 aa3.32□□□□□ -1.88
SSF2YDR312W PHM6Q05637 104 aa3.32□□□□□ -1.88
SSF2YDR312W ARR3Q06598 404 aa3.32□□□□□ -1.88
SSF2YDR312W PEX15Q08215 383 aa3.32□□□□□ -1.88
SSF2YDR312W AIM41Q12032 185 aa3.32□□□□□ -1.88
SSF2YDR312W SSN2P38931 1420 aa3.32□□□□□ -1.88
SSF2YDR312W PGK1P00560 416 aaKnown RBP3.31□□□□□ -1.88
SSF2YDR312W TY2B-LR1P0C2J3 1770 aa3.31□□□□□ -1.88
SSF2YDR312W TY2B-FP0CX63 1770 aa3.31□□□□□ -1.88
SSF2YDR312W TY2B-GR2P0CX64 1770 aa3.31□□□□□ -1.88
SSF2YDR312W TY2B-CP25384 1770 aa3.31□□□□□ -1.88
SSF2YDR312W TOM20P35180 183 aa3.31□□□□□ -1.88
SSF2YDR312W LRO1P40345 661 aa3.31□□□□□ -1.88
SSF2YDR312W BNA3P47039 444 aaKnown RBP3.31□□□□□ -1.88
SSF2YDR312W YNL034WP53963 612 aa3.31□□□□□ -1.88
SSF2YDR312W YNL018CP53976 612 aa3.31□□□□□ -1.88
SSF2YDR312W TGL2P54857 326 aa3.31□□□□□ -1.88
SSF2YDR312W TY2B-DR2Q03494 1770 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms