RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUR2	YDR297W	PAP1	P29468	568 aa	Known RBP	4.98	□□□□□ -1.61
SUR2	YDR297W	ITR1	P30605	584 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	IRE1	P32361	1115 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	SFA1	P32771	386 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	TFB1	P32776	642 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	RPT3	P33298	428 aa	Known RBP	4.98	□□□□□ -1.61
SUR2	YDR297W	XRS2	P33301	854 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	MDL2	P33311	773 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	SET3	P36124	751 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	UIP5	P36137	443 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	YBR284W	P38150	797 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	PSY4	P38193	441 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	RPN10	P38886	268 aa	Known RBP	4.98	□□□□□ -1.61
SUR2	YDR297W	SMC2	P38989	1170 aa	Known RBP	4.98	□□□□□ -1.61
SUR2	YDR297W	TIF4631	P39935	952 aa	Known RBP	4.98	□□□□□ -1.61
SUR2	YDR297W	NDC80	P40460	691 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	CIR1	P42940	261 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	MET12	P46151	657 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	NUP85	P46673	744 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	YJL055W	P47044	245 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	CNM67	P53865	581 aa	Known RBP	4.98	□□□□□ -1.61
SUR2	YDR297W	YNL165W	P53891	406 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	UBP2	Q01476	1272 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	RRN5	Q02983	363 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	YDR514C	Q04408	483 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	RSC58	Q07979	502 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	MLH2	Q07980	695 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	RTC5	Q12108	567 aa	Known RBP	4.98	□□□□□ -1.61
SUR2	YDR297W	YPL150W	Q12152	901 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	SCM3	Q12334	223 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	ADF1	Q2V2Q1	113 aa		4.98	□□□□□ -1.61
SUR2	YDR297W	SES1	P07284	462 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	SNF3	P10870	884 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	MSD1	P15179	658 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	COQ1	P18900	473 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	PMA2	P19657	947 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	PWP1	P21304	576 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	RSC6	P25632	483 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	MET22	P32179	357 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	KNS1	P32350	737 aa	Predicted RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	ASF2	P32448	525 aa	Predicted RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	HOG1	P32485	435 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	NGG1	P32494	702 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	PET309	P32522	965 aa	Predicted RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	SEG2	P34250	1132 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	BMH2	P34730	273 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	NCL1	P38205	684 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	AMN1	P38285	549 aa	Predicted RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	DED81	P38707	554 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	LRP1	P38801	184 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	TOM71	P38825	639 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	ALD5	P40047	520 aa	Known RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	RSM25	P40496	264 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	GYP8	P43570	497 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	BNA1	P47096	177 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	YGR153W	P48238	217 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	ZIP2	P53061	704 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	MNP1	P53163	194 aa	Predicted RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	ATP25	Q03153	612 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	RKM1	Q08961	583 aa	Predicted RBP	4.97	□□□□□ -1.61
SUR2	YDR297W	YPR071W	Q12346	211 aa		4.97	□□□□□ -1.61
SUR2	YDR297W	JIP3	O13555	125 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	TEF1	P02994	458 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	DED1	P06634	604 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	FUS1	P11710	512 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	TOP3	P13099	656 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
SUR2	YDR297W	COX11	P19516	300 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	AFT1	P22149	690 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	HEM12	P32347	362 aa	Predicted RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	KRE6	P32486	720 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	REC104	P33323	182 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	DUR3	P33413	735 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	SWH1	P35845	1188 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	PCM1	P38628	557 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	SRP72	P38688	640 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	PAN5	P38787	379 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	VPS45	P38932	577 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	SSN3	P39073	555 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	CCT5	P40413	562 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	MMM1	P41800	426 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	YRB1	P41920	201 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	SBE2	P42223	864 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	EPL1	P43572	832 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	MDR1	P53258	950 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	IST1	P53843	298 aa	Predicted RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	CUS1	Q02554	436 aa	Predicted RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	TRS130	Q03660	1102 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	GSF2	Q04697	403 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	DUS3	Q06053	668 aa	Known RBP	4.96	□□□□□ -1.62
SUR2	YDR297W	YLR407W	Q06070	228 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	SDH5	Q08230	162 aa		4.96	□□□□□ -1.62
SUR2	YDR297W	FLO11	P08640	1367 aa		4.95	□□□□□ -1.62
SUR2	YDR297W	CHO2	P05374	869 aa	Known RBP	4.95	□□□□□ -1.62
SUR2	YDR297W	CTT1	P06115	562 aa		4.95	□□□□□ -1.62
SUR2	YDR297W	ARG82	P07250	355 aa		4.95	□□□□□ -1.62
SUR2	YDR297W	PUT4	P15380	627 aa		4.95	□□□□□ -1.62
SUR2	YDR297W	TRX1	P22217	103 aa	Known RBP	4.95	□□□□□ -1.62
SUR2	YDR297W	RDS1	P25611	832 aa		4.95	□□□□□ -1.62
SUR2	YDR297W	ELM1	P32801	640 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms