RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	PGI1	P12709	554 aa	Known RBP	4.58	□□□□□ -1.68
DPB4	YDR121W	SFL1	P20134	766 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	PCL2	P25693	308 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	DPH2	P32461	534 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	COY1	P34237	679 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	VID24	P38263	362 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	OPY1	P38271	328 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	PCM1	P38628	557 aa	Known RBP	4.58	□□□□□ -1.68
DPB4	YDR121W	SIT1	P39980	628 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	RPN3	P40016	523 aa	Known RBP	4.58	□□□□□ -1.68
DPB4	YDR121W	YGR153W	P48238	217 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	YKE2	P52553	114 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	ENV11	P53246	860 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	RTT102	P53330	157 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	ARP5	P53946	755 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	ARK1	P53974	638 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	UBX4	P54730	416 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	YLR407W	Q06070	228 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	ESC8	Q08119	714 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	SLK19	Q08581	821 aa	Known RBP	4.58	□□□□□ -1.68
DPB4	YDR121W	PLP2	Q12017	286 aa		4.58	□□□□□ -1.68
DPB4	YDR121W	ACC1	Q00955	2233 aa	Known RBP	4.57	□□□□□ -1.68
DPB4	YDR121W	YER152C	P10356	443 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	NFS1	P25374	497 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	MTC2	P34246	357 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	ATG19	P35193	415 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	ARL1	P38116	183 aa	Known RBP	4.57	□□□□□ -1.68
DPB4	YDR121W	PIH1	P38768	344 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	YAR028W	P39548	234 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	YER186C	P40101	306 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	TOK1	P40310	691 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	GYP8	P43570	497 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	SPC105	P53148	917 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	CUL3	P53202	744 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	NCS2	P53923	493 aa	Predicted RBP	4.57	□□□□□ -1.68
DPB4	YDR121W	MET14	Q02196	202 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	RCR2	Q03446	210 aa	Known RBP	4.57	□□□□□ -1.68
DPB4	YDR121W	FUS2	Q05670	677 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	YLH47	Q06493	454 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	ALG6	Q12001	544 aa	Known RBP	4.57	□□□□□ -1.68
DPB4	YDR121W	CEX1	Q12453	761 aa		4.57	□□□□□ -1.68
DPB4	YDR121W	IRA2	P19158	3079 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	ADE8	P04161	214 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	HAP2	P06774	265 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	YEL076C-A	P0CX16	216 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	YLR464W	P0CX17	216 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	RPL4A	P10664	362 aa	Known RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	CBP3	P21560	335 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	DBP2	P24783	546 aa	Known RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	COT1	P32798	439 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	AFR1	P33304	620 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	OMA1	P36163	345 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	PGM2	P37012	569 aa	Known RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	HMT1	P38074	348 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	MRX3	P38172	270 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	YBR238C	P38330	731 aa	Known RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	REI1	P38344	393 aa	Predicted RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	SIP3	P38717	1229 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	YEL076C	P39971	216 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	ZAP1	P47043	880 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	RPL4B	P49626	362 aa	Known RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	GUP1	P53154	560 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	CAF130	P53280	1122 aa	Predicted RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	SOK2	P53438	785 aa	Predicted RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	TRS130	Q03660	1102 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	ADY4	Q05955	493 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	COG4	Q06096	861 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	DNL4	Q08387	944 aa	Predicted RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	GET3	Q12154	354 aa	Known RBP	4.56	□□□□□ -1.68
DPB4	YDR121W	SPO21	Q12411	609 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	NHA1	Q99271	985 aa		4.56	□□□□□ -1.68
DPB4	YDR121W	TUF1	P02992	437 aa	Known RBP	4.55	□□□□□ -1.68
DPB4	YDR121W	AI3	P03877	415 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	GAL1	P04385	528 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	ATP1	P07251	545 aa	Known RBP	4.55	□□□□□ -1.68
DPB4	YDR121W	RPL11A	P0C0W9	174 aa	Known RBP	4.55	□□□□□ -1.68
DPB4	YDR121W	CUP1-1	P0CX80	61 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	CUP1-2	P0CX81	61 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	MAS1	P10507	462 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	HMG2	P12684	1045 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	SPO11	P23179	398 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	NPP1	P25353	742 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	PGS1	P25578	521 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	DAL3	P32459	195 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	CDC12	P32468	407 aa	Known RBP	4.55	□□□□□ -1.68
DPB4	YDR121W	HSP78	P33416	811 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	YEL1	P34225	687 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	SEG2	P34250	1132 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	OAF1	P39720	1047 aa	Predicted RBP	4.55	□□□□□ -1.68
DPB4	YDR121W	GCV1	P48015	400 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	STB4	P50104	949 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	AIM14	P53109	570 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	SPC98	P53540	846 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	ALG11	P53954	548 aa	Known RBP	4.55	□□□□□ -1.68
DPB4	YDR121W	ECM7	Q06200	448 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	RSC3	Q06639	885 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	DCS2	Q12123	353 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	TIP41	Q12199	356 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	SMC6	Q12749	1114 aa		4.55	□□□□□ -1.68
DPB4	YDR121W	RPL11B	Q3E757	174 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms