RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W RIX1P38883 763 aaPredicted RBP6.02□□□□□ -1.45
VMS1YDR049W YDR089WP38966 869 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-JR2P47099 440 aa6.02□□□□□ -1.45
VMS1YDR049W LIA1P47120 325 aaKnown RBP6.02□□□□□ -1.45
VMS1YDR049W TY1A-DR1Q03856 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-ML1Q04706 440 aaKnown RBP6.02□□□□□ -1.45
VMS1YDR049W PML1Q07930 204 aaPredicted RBP6.02□□□□□ -1.45
VMS1YDR049W ETT1Q08421 412 aaKnown RBP6.02□□□□□ -1.45
VMS1YDR049W MET7Q08645 548 aa6.02□□□□□ -1.45
VMS1YDR049W MCH5Q08777 521 aa6.02□□□□□ -1.45
VMS1YDR049W BUG1Q12191 341 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-BRQ12217 440 aa6.02□□□□□ -1.45
VMS1YDR049W HER1Q12276 1246 aa6.02□□□□□ -1.45
VMS1YDR049W TAF3Q12297 353 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-NL2Q12470 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-GR2Q12485 440 aa6.02□□□□□ -1.45
VMS1YDR049W YOL159C-AQ3E769 90 aa6.02□□□□□ -1.45
VMS1YDR049W Q0182Q9ZZW1 134 aa6.02□□□□□ -1.45
VMS1YDR049W IKI3Q06706 1349 aaKnown RBP6.01□□□□□ -1.45
VMS1YDR049W DED1P06634 604 aaKnown RBP6.01□□□□□ -1.45
VMS1YDR049W YML002WP0CF17 737 aa6.01□□□□□ -1.45
VMS1YDR049W KSS1P14681 368 aa6.01□□□□□ -1.45
VMS1YDR049W MDH1P17505 334 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
VMS1YDR049W CLB4P24871 460 aa6.01□□□□□ -1.45
VMS1YDR049W ECM4P36156 370 aa6.01□□□□□ -1.45
VMS1YDR049W GIP1P38229 639 aa6.01□□□□□ -1.45
VMS1YDR049W COS111P38308 924 aa6.01□□□□□ -1.45
VMS1YDR049W SLX1P38324 304 aa6.01□□□□□ -1.45
VMS1YDR049W BSD2P38356 321 aa6.01□□□□□ -1.45
VMS1YDR049W YHR097CP38809 366 aaKnown RBP6.01□□□□□ -1.45
VMS1YDR049W DAM1P53267 343 aa6.01□□□□□ -1.45
VMS1YDR049W GIS4Q04233 774 aa6.01□□□□□ -1.45
VMS1YDR049W ECM22Q05958 814 aaPredicted RBP6.01□□□□□ -1.45
VMS1YDR049W ARR1Q06596 294 aa6.01□□□□□ -1.45
VMS1YDR049W CWC2Q12046 339 aaPredicted RBP6.01□□□□□ -1.45
VMS1YDR049W SPE3Q12074 293 aaKnown RBP6.01□□□□□ -1.45
VMS1YDR049W CHS5Q12114 671 aaKnown RBP6.01□□□□□ -1.45
VMS1YDR049W AVL9Q12500 764 aa6.01□□□□□ -1.45
VMS1YDR049W PHO5P00635 467 aa6□□□□□ -1.45
VMS1YDR049W RPL19AP0CX82 189 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W RPL19BP0CX83 189 aaPredicted RBP6□□□□□ -1.45
VMS1YDR049W ADH4P10127 382 aa6□□□□□ -1.45
VMS1YDR049W CLN1P20437 546 aa6□□□□□ -1.45
VMS1YDR049W SDH2P21801 266 aa6□□□□□ -1.45
VMS1YDR049W PHO91P27514 894 aa6□□□□□ -1.45
VMS1YDR049W MDL2P33311 773 aa6□□□□□ -1.45
VMS1YDR049W STE13P33894 931 aa6□□□□□ -1.45
VMS1YDR049W PGM2P37012 569 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W EAF5P39995 279 aa6□□□□□ -1.45
VMS1YDR049W SSU1P41930 458 aa6□□□□□ -1.45
VMS1YDR049W GCN20P43535 752 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W MRX6P48564 524 aa6□□□□□ -1.45
VMS1YDR049W ECM18Q04623 453 aa6□□□□□ -1.45
VMS1YDR049W DUS3Q06053 668 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W EMG1Q06287 252 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W TY3A-GQ12173 290 aa6□□□□□ -1.45
VMS1YDR049W GPM3Q12326 303 aa6□□□□□ -1.45
VMS1YDR049W GRX6Q12438 231 aa6□□□□□ -1.45
VMS1YDR049W SKM1Q12469 655 aa6□□□□□ -1.45
VMS1YDR049W YBL111CQ3E7Y5 667 aa6□□□□□ -1.45
VMS1YDR049W YIL002W-AQ3E7Z5 69 aa6□□□□□ -1.45
VMS1YDR049W TY3A-IQ99219 290 aa6□□□□□ -1.45
VMS1YDR049W SEC53P07283 254 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W SWI6P09959 803 aa6□□□□□ -1.45
VMS1YDR049W OCA4P25366 362 aa6□□□□□ -1.45
VMS1YDR049W PER1P25625 357 aa6□□□□□ -1.45
VMS1YDR049W GCD11P32481 527 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W BUD2P33314 1104 aa6□□□□□ -1.45
VMS1YDR049W HEL1P36113 551 aa6□□□□□ -1.45
VMS1YDR049W YRO2P38079 344 aa6□□□□□ -1.45
VMS1YDR049W ERT1P38140 529 aa6□□□□□ -1.45
VMS1YDR049W SCS2P40075 244 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W MPH1P40562 993 aa6□□□□□ -1.45
VMS1YDR049W YIR014WP40570 242 aa6□□□□□ -1.45
VMS1YDR049W MLC1P53141 149 aa6□□□□□ -1.45
VMS1YDR049W DSE4P53753 1117 aa6□□□□□ -1.45
VMS1YDR049W VPS54Q12071 889 aa6□□□□□ -1.45
VMS1YDR049W HUA2Q12134 243 aa6□□□□□ -1.45
VMS1YDR049W GET3Q12154 354 aaKnown RBP6□□□□□ -1.45
VMS1YDR049W PFK27Q12471 397 aaPredicted RBP6□□□□□ -1.45
VMS1YDR049W SWR1Q05471 1514 aa5.99□□□□□ -1.45
VMS1YDR049W VAS1P07806 1104 aaKnown RBP5.99□□□□□ -1.45
VMS1YDR049W BIK1P11709 440 aa5.99□□□□□ -1.45
VMS1YDR049W BET2P20133 325 aa5.99□□□□□ -1.45
VMS1YDR049W PRE8P23639 250 aa5.99□□□□□ -1.45
VMS1YDR049W TGL1P34163 548 aa5.99□□□□□ -1.45
VMS1YDR049W EMC3P36039 253 aa5.99□□□□□ -1.45
VMS1YDR049W ADH5P38113 351 aaKnown RBP5.99□□□□□ -1.45
VMS1YDR049W RRD1P40454 393 aaKnown RBP5.99□□□□□ -1.45
VMS1YDR049W SDS3P40505 327 aa5.99□□□□□ -1.45
VMS1YDR049W MMM1P41800 426 aa5.99□□□□□ -1.45
VMS1YDR049W SIP4P46954 829 aa5.99□□□□□ -1.45
VMS1YDR049W YGR054WP53235 642 aaKnown RBP5.99□□□□□ -1.45
VMS1YDR049W EGD1Q02642 157 aaKnown RBP5.99□□□□□ -1.45
VMS1YDR049W EST2Q06163 884 aa5.99□□□□□ -1.45
VMS1YDR049W MMR1Q06324 491 aa5.99□□□□□ -1.45
VMS1YDR049W LUC7Q07508 261 aaPredicted RBP5.99□□□□□ -1.45
VMS1YDR049W CIR2Q08822 631 aa5.99□□□□□ -1.45
VMS1YDR049W CTI6Q08923 506 aa5.99□□□□□ -1.45
VMS1YDR049W PSF3Q12146 194 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms