RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C MNP1P53163 194 aaPredicted RBP2.18□□□□□ -2.06
BRE1YDL074C COP1P53622 1201 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C YNL134CP53912 376 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C YNL040WP53960 456 aaPredicted RBP2.18□□□□□ -2.06
BRE1YDL074C SUB1P54000 292 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C VPS9P54787 451 aa2.18□□□□□ -2.06
BRE1YDL074C CDC55Q00362 526 aa2.18□□□□□ -2.06
BRE1YDL074C USA1Q03714 838 aa2.18□□□□□ -2.06
BRE1YDL074C GIS1Q03833 894 aa2.18□□□□□ -2.06
BRE1YDL074C RKM2Q03942 479 aa2.18□□□□□ -2.06
BRE1YDL074C GTB1Q04924 702 aa2.18□□□□□ -2.06
BRE1YDL074C PNP1Q05788 311 aa2.18□□□□□ -2.06
BRE1YDL074C IMA2Q08295 589 aa2.18□□□□□ -2.06
BRE1YDL074C AAD15Q08361 143 aa2.18□□□□□ -2.06
BRE1YDL074C DNL4Q08387 944 aaPredicted RBP2.18□□□□□ -2.06
BRE1YDL074C TRE1Q08919 783 aa2.18□□□□□ -2.06
BRE1YDL074C THI21Q08975 551 aa2.18□□□□□ -2.06
BRE1YDL074C GPM3Q12326 303 aa2.18□□□□□ -2.06
BRE1YDL074C RRP36Q12481 300 aaPredicted RBP2.18□□□□□ -2.06
BRE1YDL074C RTP1Q12751 981 aa2.18□□□□□ -2.06
BRE1YDL074C BI3Q9ZZW7 517 aa2.18□□□□□ -2.06
BRE1YDL074C PAB1P04147 577 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
BRE1YDL074C SBP1P10080 294 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C PYC1P11154 1178 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C MAS2P11914 482 aa2.18□□□□□ -2.06
BRE1YDL074C PMR1P13586 950 aa2.18□□□□□ -2.06
BRE1YDL074C HEM15P16622 393 aa2.18□□□□□ -2.06
BRE1YDL074C GAL11P19659 1081 aa2.18□□□□□ -2.06
BRE1YDL074C SCJ1P25303 377 aa2.18□□□□□ -2.06
BRE1YDL074C VBA3P25594 458 aa2.18□□□□□ -2.06
BRE1YDL074C FUB1P25659 250 aa2.18□□□□□ -2.06
BRE1YDL074C MGT1P26188 188 aa2.18□□□□□ -2.06
BRE1YDL074C MEI4P29467 408 aa2.18□□□□□ -2.06
BRE1YDL074C HEM12P32347 362 aaPredicted RBP2.18□□□□□ -2.06
BRE1YDL074C RPT1P33299 467 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C SRB2P34162 210 aa2.18□□□□□ -2.06
BRE1YDL074C VBA5P36172 582 aa2.18□□□□□ -2.06
BRE1YDL074C GLY1P37303 387 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C PBP2P38151 413 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
BRE1YDL074C CBR1P38626 284 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C QNS1P38795 714 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C PNT1P38969 423 aa2.18□□□□□ -2.06
BRE1YDL074C SSP120P39931 234 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C KHA1P40309 873 aa2.18□□□□□ -2.06
BRE1YDL074C SEC28P40509 296 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C YIL054WP40524 105 aa2.18□□□□□ -2.06
BRE1YDL074C BFA1P47113 574 aa2.18□□□□□ -2.06
BRE1YDL074C LIA1P47120 325 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C RFX1P48743 811 aa2.18□□□□□ -2.06
BRE1YDL074C PUS2P53167 370 aa2.18□□□□□ -2.06
BRE1YDL074C SLT2Q00772 484 aa2.18□□□□□ -2.06
BRE1YDL074C ADA2Q02336 434 aa2.18□□□□□ -2.06
BRE1YDL074C VPS72Q03388 795 aa2.18□□□□□ -2.06
BRE1YDL074C YMR321CQ04898 105 aa2.18□□□□□ -2.06
BRE1YDL074C TAF9Q05027 157 aa2.18□□□□□ -2.06
BRE1YDL074C YLR225CQ05948 407 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C YLR346CQ06139 101 aa2.18□□□□□ -2.06
BRE1YDL074C ADY3Q07732 790 aa2.18□□□□□ -2.06
BRE1YDL074C AAD4Q07747 329 aa2.18□□□□□ -2.06
BRE1YDL074C MDM38Q08179 573 aa2.18□□□□□ -2.06
BRE1YDL074C THI20Q08224 551 aa2.18□□□□□ -2.06
BRE1YDL074C YPR027CQ12079 277 aa2.18□□□□□ -2.06
BRE1YDL074C HEM1P09950 548 aaPredicted RBP2.17□□□□□ -2.06
BRE1YDL074C CDC24P11433 854 aaPredicted RBP2.17□□□□□ -2.06
BRE1YDL074C GLN3P18494 730 aa2.17□□□□□ -2.06
BRE1YDL074C IME1P21190 360 aa2.17□□□□□ -2.06
BRE1YDL074C PUF4P25339 888 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
BRE1YDL074C LRE1P25579 583 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C RPC19P28000 142 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C PRR1P28708 518 aa2.17□□□□□ -2.06
BRE1YDL074C URA10P30402 227 aa2.17□□□□□ -2.06
BRE1YDL074C CYS3P31373 394 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C MET4P32389 672 aa2.17□□□□□ -2.06
BRE1YDL074C MRP4P32902 394 aa2.17□□□□□ -2.06
BRE1YDL074C KES1P35844 434 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C DUG2P38149 878 aa2.17□□□□□ -2.06
BRE1YDL074C FUI1P38196 639 aa2.17□□□□□ -2.06
BRE1YDL074C HSM3P38348 480 aa2.17□□□□□ -2.06
BRE1YDL074C SMF2P38778 549 aa2.17□□□□□ -2.06
BRE1YDL074C CRP1P38845 465 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C RAD55P38953 406 aa2.17□□□□□ -2.06
BRE1YDL074C PRM9P39551 298 aa2.17□□□□□ -2.06
BRE1YDL074C ECM1P39715 212 aa2.17□□□□□ -2.06
BRE1YDL074C FRT2P39734 528 aa2.17□□□□□ -2.06
BRE1YDL074C DSE1P40077 573 aa2.17□□□□□ -2.06
BRE1YDL074C YJR107WP47145 328 aa2.17□□□□□ -2.06
BRE1YDL074C TPO2P53283 614 aa2.17□□□□□ -2.06
BRE1YDL074C DAK1P54838 584 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C DOT1Q04089 582 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C TAF11Q04226 346 aa2.17□□□□□ -2.06
BRE1YDL074C GRX8Q05926 109 aa2.17□□□□□ -2.06
BRE1YDL074C YOR059CQ08448 450 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C GPN2Q08726 347 aaPredicted RBP2.17□□□□□ -2.06
BRE1YDL074C YLR053CQ12026 108 aa2.17□□□□□ -2.06
BRE1YDL074C SPE4Q12455 300 aa2.17□□□□□ -2.06
BRE1YDL074C RRD2Q12461 358 aa2.17□□□□□ -2.06
BRE1YDL074C AVL9Q12500 764 aa2.17□□□□□ -2.06
BRE1YDL074C TIF6Q12522 245 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C CBF1P17106 351 aa2.17□□□□□ -2.06
BRE1YDL074C RGR1P19263 1082 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms