RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C COX11P19516 300 aaKnown RBP3.82□□□□□ -1.8
SHG1YBR258C ATP12P22135 325 aa3.82□□□□□ -1.8
SHG1YBR258C PRP28P23394 588 aa3.82□□□□□ -1.8
SHG1YBR258C HXT4P32467 576 aa3.82□□□□□ -1.8
SHG1YBR258C MTC7P32633 139 aa3.82□□□□□ -1.8
SHG1YBR258C BCS1P32839 456 aa3.82□□□□□ -1.8
SHG1YBR258C PPS1P38148 807 aa3.82□□□□□ -1.8
SHG1YBR258C YHL017WP38745 532 aa3.82□□□□□ -1.8
SHG1YBR258C REV7P38927 245 aa3.82□□□□□ -1.8
SHG1YBR258C YIL089WP40500 205 aa3.82□□□□□ -1.8
SHG1YBR258C IRC5P43610 853 aa3.82□□□□□ -1.8
SHG1YBR258C DAS1P47005 663 aa3.82□□□□□ -1.8
SHG1YBR258C PAN2P53010 1115 aaPredicted RBP3.82□□□□□ -1.8
SHG1YBR258C COX18P53239 316 aa3.82□□□□□ -1.8
SHG1YBR258C TGL2P54857 326 aa3.82□□□□□ -1.8
SHG1YBR258C HLR1Q04429 423 aa3.82□□□□□ -1.8
SHG1YBR258C VBA4Q04602 768 aaKnown RBP3.82□□□□□ -1.8
SHG1YBR258C PEX15Q08215 383 aa3.82□□□□□ -1.8
SHG1YBR258C DIA2Q08496 732 aaPredicted RBP3.82□□□□□ -1.8
SHG1YBR258C SLX4Q12098 748 aa3.82□□□□□ -1.8
SHG1YBR258C YRF1-4O13559 1382 aa3.81□□□□□ -1.8
SHG1YBR258C PRP22P24384 1145 aaKnown RBP3.81□□□□□ -1.8
SHG1YBR258C MVD1P32377 396 aaKnown RBP3.81□□□□□ -1.8
SHG1YBR258C TFC4P33339 1025 aa3.81□□□□□ -1.8
SHG1YBR258C SRP68P38687 599 aaKnown RBP3.81□□□□□ -1.8
SHG1YBR258C DUN1P39009 513 aa3.81□□□□□ -1.8
SHG1YBR258C PXA1P41909 870 aa3.81□□□□□ -1.8
SHG1YBR258C TAF4P50105 388 aa3.81□□□□□ -1.8
SHG1YBR258C SLD3P53135 668 aa3.81□□□□□ -1.8
SHG1YBR258C CTF4Q01454 927 aa3.81□□□□□ -1.8
SHG1YBR258C PHM6Q05637 104 aa3.81□□□□□ -1.8
SHG1YBR258C TOR2P32600 2474 aaKnown RBP3.81□□□□□ -1.8
SHG1YBR258C TY4B-HP0C2J7 1802 aa3.8□□□□□ -1.8
SHG1YBR258C TY4B-JP47024 1803 aa3.8□□□□□ -1.8
SHG1YBR258C THR1P17423 357 aaKnown RBP3.8□□□□□ -1.8
SHG1YBR258C FEN2P25621 512 aaKnown RBP3.8□□□□□ -1.8
SHG1YBR258C PRE4P30657 266 aa3.8□□□□□ -1.8
SHG1YBR258C MSS1P32559 526 aaPredicted RBP3.8□□□□□ -1.8
SHG1YBR258C OAR1P35731 278 aa3.8□□□□□ -1.8
SHG1YBR258C PHO11P35842 467 aa3.8□□□□□ -1.8
SHG1YBR258C YKL133CP36066 463 aa3.8□□□□□ -1.8
SHG1YBR258C PHO12P38693 467 aa3.8□□□□□ -1.8
SHG1YBR258C PIG2P40187 538 aa3.8□□□□□ -1.8
SHG1YBR258C SPC105P53148 917 aa3.8□□□□□ -1.8
SHG1YBR258C YNL034WP53963 612 aa3.8□□□□□ -1.8
SHG1YBR258C YNL018CP53976 612 aa3.8□□□□□ -1.8
SHG1YBR258C MTD1Q02046 320 aaKnown RBP3.8□□□□□ -1.8
SHG1YBR258C CHS5Q12114 671 aaKnown RBP3.8□□□□□ -1.8
SHG1YBR258C KAR1P11927 433 aa3.79□□□□□ -1.8
SHG1YBR258C HIS7P33734 552 aaKnown RBP3.79□□□□□ -1.8
SHG1YBR258C SFB3P38810 929 aa3.79□□□□□ -1.8
SHG1YBR258C PRM2P40534 656 aa3.79□□□□□ -1.8
SHG1YBR258C NOP2P40991 618 aaKnown RBP3.79□□□□□ -1.8
SHG1YBR258C PUS4P48567 403 aaKnown RBP3.79□□□□□ -1.8
SHG1YBR258C SMX3P54999 86 aaPredicted RBP3.79□□□□□ -1.8
SHG1YBR258C FDC1Q03034 503 aa3.79□□□□□ -1.8
SHG1YBR258C YFT2Q06676 274 aa3.79□□□□□ -1.8
SHG1YBR258C BUD21Q08492 214 aaPredicted RBP3.79□□□□□ -1.8
SHG1YBR258C MLH3Q12083 715 aa3.79□□□□□ -1.8
SHG1YBR258C ACF2Q12168 779 aa3.79□□□□□ -1.8
SHG1YBR258C NYV1Q12255 253 aa3.79□□□□□ -1.8
SHG1YBR258C ZRT2Q12436 422 aa3.79□□□□□ -1.8
SHG1YBR258C TMA7Q3E764 64 aaKnown RBP3.79□□□□□ -1.8
SHG1YBR258C FAB1P34756 2278 aa3.79□□□□□ -1.8
SHG1YBR258C NUP192P47054 1683 aa3.78□□□□□ -1.8
SHG1YBR258C MOH1P38191 138 aa3.78□□□□□ -1.8
SHG1YBR258C CDS1P38221 457 aa3.78□□□□□ -1.8
SHG1YBR258C COS111P38308 924 aa3.78□□□□□ -1.8
SHG1YBR258C PEA2P40091 420 aa3.78□□□□□ -1.8
SHG1YBR258C RFX1P48743 811 aa3.78□□□□□ -1.8
SHG1YBR258C PEF1P53238 335 aa3.78□□□□□ -1.8
SHG1YBR258C CNM67P53865 581 aaKnown RBP3.78□□□□□ -1.8
SHG1YBR258C SSL2Q00578 843 aa3.78□□□□□ -1.8
SHG1YBR258C MUK1Q02866 612 aa3.78□□□□□ -1.8
SHG1YBR258C NGL1Q08213 363 aaKnown RBP3.78□□□□□ -1.8
SHG1YBR258C PNS1Q12412 539 aa3.78□□□□□ -1.8
SHG1YBR258C ATP4P05626 244 aa3.77□□□□□ -1.81
SHG1YBR258C RPS9BP05755 195 aaKnown RBP3.77□□□□□ -1.81
SHG1YBR258C HMG2P12684 1045 aa3.77□□□□□ -1.81
SHG1YBR258C HCA4P20448 770 aaKnown RBP3.77□□□□□ -1.81
SHG1YBR258C DGR2P32330 852 aa3.77□□□□□ -1.81
SHG1YBR258C GRX7P38068 203 aa3.77□□□□□ -1.81
SHG1YBR258C CTP1P38152 299 aa3.77□□□□□ -1.81
SHG1YBR258C RRP8P38961 392 aaKnown RBP3.77□□□□□ -1.81
SHG1YBR258C SSP120P39931 234 aaKnown RBP3.77□□□□□ -1.81
SHG1YBR258C YIL077CP40508 320 aa3.77□□□□□ -1.81
SHG1YBR258C YDL183CP48569 320 aa3.77□□□□□ -1.81
SHG1YBR258C HOL1P53389 586 aa3.77□□□□□ -1.81
SHG1YBR258C ATG4P53867 494 aa3.77□□□□□ -1.81
SHG1YBR258C ECM38Q05902 660 aaPredicted RBP3.77□□□□□ -1.81
SHG1YBR258C VPS5Q92331 675 aa3.77□□□□□ -1.81
SHG1YBR258C APC1P53886 1748 aa3.77□□□□□ -1.81
SHG1YBR258C YEL076C-AP0CX16 216 aa3.76□□□□□ -1.81
SHG1YBR258C YLR464WP0CX17 216 aa3.76□□□□□ -1.81
SHG1YBR258C UBS1P38290 277 aa3.76□□□□□ -1.81
SHG1YBR258C CRG1P38892 291 aaRIP-Chip data3.76□□□□□ -1.81not detected
SHG1YBR258C YEL076CP39971 216 aa3.76□□□□□ -1.81
SHG1YBR258C FTR1P40088 404 aa3.76□□□□□ -1.81
SHG1YBR258C KHA1P40309 873 aa3.76□□□□□ -1.81
SHG1YBR258C ARG2P40360 574 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms