RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C EXO1P39875 702 aa4.03□□□□□ -1.76
TRS20YBR254C PSA1P41940 361 aaKnown RBP4.03□□□□□ -1.76
TRS20YBR254C YFL015CP43578 164 aa4.03□□□□□ -1.76
TRS20YBR254C MNN11P46985 422 aaKnown RBP4.03□□□□□ -1.76
TRS20YBR254C YJL043WP47053 257 aa4.03□□□□□ -1.76
TRS20YBR254C GPG1P53130 126 aa4.03□□□□□ -1.76
TRS20YBR254C PTA1Q01329 785 aaPredicted RBP4.03□□□□□ -1.76
TRS20YBR254C UME1Q03010 460 aa4.03□□□□□ -1.76
TRS20YBR254C GEP3Q08622 556 aa4.03□□□□□ -1.76
TRS20YBR254C CIR2Q08822 631 aa4.03□□□□□ -1.76
TRS20YBR254C AIM41Q12032 185 aa4.03□□□□□ -1.76
TRS20YBR254C RNR3P21672 869 aaKnown RBP4.02□□□□□ -1.77
TRS20YBR254C MRPL9P31334 269 aa4.02□□□□□ -1.77
TRS20YBR254C RPC34P32910 317 aa4.02□□□□□ -1.77
TRS20YBR254C YPT10P38146 199 aa4.02□□□□□ -1.77
TRS20YBR254C LRO1P40345 661 aa4.02□□□□□ -1.77
TRS20YBR254C SAP4P53036 818 aa4.02□□□□□ -1.77
TRS20YBR254C YNR029CP53729 429 aaKnown RBP4.02□□□□□ -1.77
TRS20YBR254C UTP14Q04500 899 aaKnown RBP4.02□□□□□ -1.77
TRS20YBR254C IRC3Q06683 689 aa4.02□□□□□ -1.77
TRS20YBR254C HMG2P12684 1045 aa4.01□□□□□ -1.77
TRS20YBR254C CAP1P28495 268 aaKnown RBP4.01□□□□□ -1.77
TRS20YBR254C ECM32P32644 1121 aaKnown RBP4.01□□□□□ -1.77
TRS20YBR254C DID4P36108 232 aa4.01□□□□□ -1.77
TRS20YBR254C NMD2P38798 1089 aaKnown RBP4.01□□□□□ -1.77
TRS20YBR254C GPP1P41277 250 aaKnown RBP4.01□□□□□ -1.77
TRS20YBR254C NMD5P46970 1048 aa4.01□□□□□ -1.77
TRS20YBR254C ATG36P46983 293 aa4.01□□□□□ -1.77
TRS20YBR254C PMT3P47190 753 aa4.01□□□□□ -1.77
TRS20YBR254C PRS5Q12265 496 aaKnown RBP4.01□□□□□ -1.77
TRS20YBR254C NUP145P49687 1317 aa4□□□□□ -1.77
TRS20YBR254C YMR084WA2P2R3 262 aa4□□□□□ -1.77
TRS20YBR254C HXT4P32467 576 aa4□□□□□ -1.77
TRS20YBR254C LOT5P34234 306 aa4□□□□□ -1.77
TRS20YBR254C RMA1P36001 430 aaKnown RBP4□□□□□ -1.77
TRS20YBR254C BST1P43571 1029 aa4□□□□□ -1.77
TRS20YBR254C YJR142WP47173 342 aa4□□□□□ -1.77
TRS20YBR254C BPL1P48445 690 aaPredicted RBP4□□□□□ -1.77
TRS20YBR254C SCS3P53012 380 aa4□□□□□ -1.77
TRS20YBR254C USA1Q03714 838 aa4□□□□□ -1.77
TRS20YBR254C TGS1Q12052 315 aa4□□□□□ -1.77
TRS20YBR254C DGR2P32330 852 aa3.99□□□□□ -1.77
TRS20YBR254C CCL1P37366 393 aa3.99□□□□□ -1.77
TRS20YBR254C BRN1P38170 754 aa3.99□□□□□ -1.77
TRS20YBR254C RSC9Q03124 581 aa3.99□□□□□ -1.77
TRS20YBR254C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
TRS20YBR254C DAL3P32459 195 aa3.98□□□□□ -1.77
TRS20YBR254C SER1P33330 395 aaKnown RBP3.98□□□□□ -1.77
TRS20YBR254C APD1P38281 316 aa3.98□□□□□ -1.77
TRS20YBR254C YJL193WP39542 402 aa3.98□□□□□ -1.77
TRS20YBR254C ENP2P48234 707 aaKnown RBP3.98□□□□□ -1.77
TRS20YBR254C WAR1Q03631 944 aa3.98□□□□□ -1.77
TRS20YBR254C GFD1Q04839 188 aaKnown RBP3.98□□□□□ -1.77
TRS20YBR254C PCL8Q08966 492 aa3.98□□□□□ -1.77
TRS20YBR254C VPS33P20795 691 aa3.97□□□□□ -1.77
TRS20YBR254C ATP12P22135 325 aa3.97□□□□□ -1.77
TRS20YBR254C GSY2P27472 705 aa3.97□□□□□ -1.77
TRS20YBR254C YPL068CQ02749 293 aa3.97□□□□□ -1.77
TRS20YBR254C NGL1Q08213 363 aaKnown RBP3.97□□□□□ -1.77
TRS20YBR254C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
TRS20YBR254C TDA10P42938 290 aa3.96□□□□□ -1.78
TRS20YBR254C YGR237CP50089 785 aa3.96□□□□□ -1.78
TRS20YBR254C ERG13P54839 491 aaKnown RBP3.96□□□□□ -1.78
TRS20YBR254C BSP1Q06604 576 aa3.96□□□□□ -1.78
TRS20YBR254C FAP7Q12055 197 aaPredicted RBP3.96□□□□□ -1.78
TRS20YBR254C YLR111WQ12528 110 aa3.96□□□□□ -1.78
TRS20YBR254C TUF1P02992 437 aaKnown RBP3.95□□□□□ -1.78
TRS20YBR254C PCK1P10963 549 aa3.95□□□□□ -1.78
TRS20YBR254C URE2P23202 354 aaKnown RBP3.95□□□□□ -1.78
TRS20YBR254C SNO3P43544 222 aa3.95□□□□□ -1.78
TRS20YBR254C SAE2P46946 345 aa3.95□□□□□ -1.78
TRS20YBR254C SQS1P53866 767 aaKnown RBP3.95□□□□□ -1.78
TRS20YBR254C TDA9Q04545 1251 aa3.95□□□□□ -1.78
TRS20YBR254C RDL1Q12305 139 aaKnown RBP3.95□□□□□ -1.78
TRS20YBR254C YPK1P12688 680 aaKnown RBP3.94□□□□□ -1.78
TRS20YBR254C YUR1P26725 428 aa3.94□□□□□ -1.78
TRS20YBR254C YJU2P28320 278 aaPredicted RBP3.94□□□□□ -1.78
TRS20YBR254C OPT1P40897 799 aa3.94□□□□□ -1.78
TRS20YBR254C RNR4P49723 345 aaKnown RBP3.94□□□□□ -1.78
TRS20YBR254C PEF1P53238 335 aa3.94□□□□□ -1.78
TRS20YBR254C AAC1P04710 309 aa3.93□□□□□ -1.78
TRS20YBR254C DSS4P32601 143 aa3.93□□□□□ -1.78
TRS20YBR254C IDP3P53982 420 aaKnown RBP3.93□□□□□ -1.78
TRS20YBR254C YGR161W-CQ3E744 92 aa3.93□□□□□ -1.78
TRS20YBR254C YEL076C-AP0CX16 216 aa3.92□□□□□ -1.78
TRS20YBR254C YLR464WP0CX17 216 aa3.92□□□□□ -1.78
TRS20YBR254C EUG1P32474 517 aa3.92□□□□□ -1.78
TRS20YBR254C YEL076CP39971 216 aa3.92□□□□□ -1.78
TRS20YBR254C IRC5P43610 853 aa3.92□□□□□ -1.78
TRS20YBR254C HRD3Q05787 833 aa3.92□□□□□ -1.78
TRS20YBR254C SPN1Q06505 410 aaPredicted RBP3.92□□□□□ -1.78
TRS20YBR254C YPR027CQ12079 277 aa3.92□□□□□ -1.78
TRS20YBR254C AHA1Q12449 350 aaKnown RBP3.92□□□□□ -1.78
TRS20YBR254C YMR085WP0CF18 432 aa3.91□□□□□ -1.78
TRS20YBR254C YAP1P19880 650 aaKnown RBP3.91□□□□□ -1.78
TRS20YBR254C BET2P20133 325 aa3.91□□□□□ -1.78
TRS20YBR254C AEP2P22136 580 aa3.91□□□□□ -1.78
TRS20YBR254C TSR4P25040 408 aa3.91□□□□□ -1.78
TRS20YBR254C GPP2P40106 250 aaKnown RBP3.91□□□□□ -1.78
TRS20YBR254C MNT3P40549 630 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms