RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	RMD8	P43620	662 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	FAA4	P47912	694 aa	Known RBP	6.04	□□□□□ -1.44
ATG12	YBR217W	ATH1	P48016	1211 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	BRO1	P48582	844 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	IMP4	P53941	290 aa	Known RBP	6.04	□□□□□ -1.44
ATG12	YBR217W	YNL040W	P53960	456 aa	Predicted RBP	6.04	□□□□□ -1.44
ATG12	YBR217W	CDC55	Q00362	526 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	RPN4	Q03465	531 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	ARA2	Q04212	335 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	ERV41	Q04651	352 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	YCS4	Q06156	1176 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	AAD4	Q07747	329 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	THI21	Q08975	551 aa		6.04	□□□□□ -1.44
ATG12	YBR217W	YPK1	P12688	680 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	SEC23	P15303	768 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	MET16	P18408	261 aa	Predicted RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	HXT1	P32465	570 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	HXT3	P32466	567 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	SEC6	P32844	805 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	STO1	P34160	861 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	PTC3	P34221	468 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	FSH1	P38777	243 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	LAM1	P38851	1228 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	HEM14	P40012	539 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	UBP7	P40453	1071 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	ERG10	P41338	398 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	BST1	P43571	1029 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	RTT101	P47050	842 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	YJR079W	P47126	109 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	PRP24	P49960	444 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	KAP114	P53067	1004 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	PEX31	P53203	462 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	COP1	P53622	1201 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	NOG2	P53742	486 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	ALF1	P53904	254 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	CTR9	P89105	1077 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	YPL014W	Q02606	381 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	ATG16	Q03818	150 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	IVY1	Q04934	453 aa		6.03	□□□□□ -1.44
ATG12	YBR217W	RTN1	Q04947	295 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	MEX67	Q99257	599 aa	Known RBP	6.03	□□□□□ -1.44
ATG12	YBR217W	CET1	O13297	549 aa	Predicted RBP	6.02	□□□□□ -1.45
ATG12	YBR217W	ARF2	P19146	181 aa	Known RBP	6.02	□□□□□ -1.45
ATG12	YBR217W	ADY2	P25613	283 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	GPI10	P30777	616 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	ECM32	P32644	1121 aa	Known RBP	6.02	□□□□□ -1.45
ATG12	YBR217W	TIF5	P38431	405 aa	Known RBP	6.02	□□□□□ -1.45
ATG12	YBR217W	HXT5	P38695	592 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	PRM9	P39551	298 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	ERP2	P39704	215 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	SPC72	P39723	622 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	YNL108C	P53929	270 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	SND1	Q04007	877 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	UFO1	Q04511	668 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.02	□□□□□ -1.45	not detected
ATG12	YBR217W	NDD1	Q08887	554 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	MPD2	Q99316	277 aa		6.02	□□□□□ -1.45
ATG12	YBR217W	YLR462W	O13556	202 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	GFA1	P14742	717 aa	Known RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	YBL055C	P34220	418 aa	Predicted RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	MCX1	P38323	520 aa	Predicted RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	YHL049C	P38722	271 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	GGA2	P38817	585 aa	Known RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	PMC1	P38929	1173 aa	Predicted RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	SAK1	P38990	1142 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	EDC3	P39998	551 aa	Known RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	KTR7	P40504	517 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	EMW1	P42842	904 aa	Known RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	YFL064C	P43540	174 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	LSB3	P43603	459 aa	Known RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	RRT5	P43607	289 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	SNG1	P46950	547 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	VEL1	P53058	206 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	TAN1	P53072	289 aa	Predicted RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	NMA2	P53204	395 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	BTN2	P53286	410 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	YMR206W	Q03695	313 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	YMR114C	Q04471	368 aa	Known RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	KAP95	Q06142	861 aa	Known RBP	6.01	□□□□□ -1.45
ATG12	YBR217W	PEX15	Q08215	383 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	YOR238W	Q08634	303 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	CIR2	Q08822	631 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	FLC1	Q08967	793 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	YBL111C	Q3E7Y5	667 aa		6.01	□□□□□ -1.45
ATG12	YBR217W	UBR1	P19812	1950 aa		6	□□□□□ -1.45
ATG12	YBR217W	HIS1	P00498	297 aa	Known RBP	6	□□□□□ -1.45
ATG12	YBR217W	FPR1	P20081	114 aa	Known RBP	6	□□□□□ -1.45
ATG12	YBR217W	YCR015C	P25616	317 aa		6	□□□□□ -1.45
ATG12	YBR217W	MEI4	P29467	408 aa		6	□□□□□ -1.45
ATG12	YBR217W	SRB4	P32569	687 aa		6	□□□□□ -1.45
ATG12	YBR217W	AIM26	P32858	118 aa		6	□□□□□ -1.45
ATG12	YBR217W	LCP5	P40079	357 aa	Predicted RBP	6	□□□□□ -1.45
ATG12	YBR217W	MKT1	P40850	830 aa	Known RBP	6	□□□□□ -1.45
ATG12	YBR217W	ALY2	P47029	1046 aa		6	□□□□□ -1.45
ATG12	YBR217W	RSM26	P47141	266 aa		6	□□□□□ -1.45
ATG12	YBR217W	MRX6	P48564	524 aa		6	□□□□□ -1.45
ATG12	YBR217W	DOS2	P54858	310 aa		6	□□□□□ -1.45
ATG12	YBR217W	NGL3	Q03210	505 aa		6	□□□□□ -1.45
ATG12	YBR217W	THI7	Q05998	598 aa		6	□□□□□ -1.45
ATG12	YBR217W	YPR084W	Q06821	456 aa		6	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms