RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W NUR1Q12066 484 aa3.62□□□□□ -1.83
NUP60YAR002W QCR6P00127 147 aa3.62□□□□□ -1.83
NUP60YAR002W CDC8P00572 216 aa3.62□□□□□ -1.83
NUP60YAR002W RPL11AP0C0W9 174 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W SAM35P14693 329 aa3.62□□□□□ -1.83
NUP60YAR002W VMA2P16140 517 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W CDC48P25694 835 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W GCG1P32656 232 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W MCD4P36051 919 aa3.62□□□□□ -1.83
NUP60YAR002W MUD2P36084 527 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W CCZ1P38273 704 aa3.62□□□□□ -1.83
NUP60YAR002W RCK2P38623 610 aa3.62□□□□□ -1.83
NUP60YAR002W ERC1P38767 581 aa3.62□□□□□ -1.83
NUP60YAR002W PNT1P38969 423 aa3.62□□□□□ -1.83
NUP60YAR002W GEM1P39722 662 aa3.62□□□□□ -1.83
NUP60YAR002W SIP5P40210 489 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W OYE3P41816 400 aaPredicted RBP3.62□□□□□ -1.83
NUP60YAR002W MIC19P43594 170 aa3.62□□□□□ -1.83
NUP60YAR002W TIM54P47045 478 aa3.62□□□□□ -1.83
NUP60YAR002W TAM41P53230 385 aa3.62□□□□□ -1.83
NUP60YAR002W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
NUP60YAR002W DIG1Q03063 452 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W VTI1Q04338 217 aa3.62□□□□□ -1.83
NUP60YAR002W UTP14Q04500 899 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W NBA1Q08229 501 aaKnown RBP3.62□□□□□ -1.83
NUP60YAR002W YOR131CQ12486 218 aa3.62□□□□□ -1.83
NUP60YAR002W RPL11BQ3E757 174 aaPredicted RBP3.62□□□□□ -1.83
NUP60YAR002W CYC7P00045 113 aa3.61□□□□□ -1.83
NUP60YAR002W SNF1P06782 633 aaKnown RBP3.61□□□□□ -1.83
NUP60YAR002W PRP9P19736 530 aaKnown RBP3.61□□□□□ -1.83
NUP60YAR002W TKL1P23254 680 aaKnown RBP3.61□□□□□ -1.83
NUP60YAR002W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
NUP60YAR002W MSH1P25846 959 aa3.61□□□□□ -1.83
NUP60YAR002W SEC21P32074 935 aaKnown RBP3.61□□□□□ -1.83
NUP60YAR002W MUD1P32605 298 aaKnown RBP3.61□□□□□ -1.83
NUP60YAR002W COT1P32798 439 aa3.61□□□□□ -1.83
NUP60YAR002W STE5P32917 917 aa3.61□□□□□ -1.83
NUP60YAR002W BLI1P35727 113 aa3.61□□□□□ -1.83
NUP60YAR002W YKL050CP35736 922 aa3.61□□□□□ -1.83
NUP60YAR002W TRZ1P36159 838 aaPredicted RBP3.61□□□□□ -1.83
NUP60YAR002W REG2P38232 338 aa3.61□□□□□ -1.83
NUP60YAR002W PIK1P39104 1066 aa3.61□□□□□ -1.83
NUP60YAR002W MBP1P39678 833 aa3.61□□□□□ -1.83
NUP60YAR002W HMF1P40037 129 aaKnown RBP3.61□□□□□ -1.83
NUP60YAR002W CTK3P46963 296 aaPredicted RBP3.61□□□□□ -1.83
NUP60YAR002W RPC17P47076 161 aa3.61□□□□□ -1.83
NUP60YAR002W AVT1P47082 602 aa3.61□□□□□ -1.83
NUP60YAR002W RRT6P53117 311 aaPredicted RBP3.61□□□□□ -1.83
NUP60YAR002W ENV11P53246 860 aa3.61□□□□□ -1.83
NUP60YAR002W YGR125WP53273 1036 aa3.61□□□□□ -1.83
NUP60YAR002W VTC3Q02725 835 aa3.61□□□□□ -1.83
NUP60YAR002W URH1Q04179 340 aa3.61□□□□□ -1.83
NUP60YAR002W GYL1Q04322 720 aa3.61□□□□□ -1.83
NUP60YAR002W YMR018WQ04364 514 aa3.61□□□□□ -1.83
NUP60YAR002W ECI1Q05871 280 aa3.61□□□□□ -1.83
NUP60YAR002W FMP25Q08023 583 aa3.61□□□□□ -1.83
NUP60YAR002W SMC5Q08204 1093 aa3.61□□□□□ -1.83
NUP60YAR002W MED7Q08278 222 aa3.61□□□□□ -1.83
NUP60YAR002W APL5Q08951 932 aaKnown RBP3.61□□□□□ -1.83
NUP60YAR002W ACM1Q08981 209 aa3.61□□□□□ -1.83
NUP60YAR002W CDC53Q12018 815 aaKnown RBP3.61□□□□□ -1.83
NUP60YAR002W SLX4Q12098 748 aa3.61□□□□□ -1.83
NUP60YAR002W ERP3Q12403 225 aa3.61□□□□□ -1.83
NUP60YAR002W ZRT2Q12436 422 aa3.61□□□□□ -1.83
NUP60YAR002W CDC33P07260 213 aaKnown RBP3.6□□□□□ -1.83
NUP60YAR002W SNF5P18480 905 aa3.6□□□□□ -1.83
NUP60YAR002W PRO1P32264 428 aa3.6□□□□□ -1.83
NUP60YAR002W ECM32P32644 1121 aaKnown RBP3.6□□□□□ -1.83
NUP60YAR002W TVP38P36164 337 aa3.6□□□□□ -1.83
NUP60YAR002W OLA1P38219 394 aaKnown RBP3.6□□□□□ -1.83
NUP60YAR002W PEX7P39108 375 aa3.6□□□□□ -1.83
NUP60YAR002W SAP1P39955 897 aaKnown RBP3.6□□□□□ -1.83
NUP60YAR002W MXR1P40029 184 aa3.6□□□□□ -1.83
NUP60YAR002W NET1P47035 1189 aa3.6□□□□□ -1.83
NUP60YAR002W ERP6P53198 216 aa3.6□□□□□ -1.83
NUP60YAR002W TPO2P53283 614 aa3.6□□□□□ -1.83
NUP60YAR002W RTT102P53330 157 aa3.6□□□□□ -1.83
NUP60YAR002W JJJ1P53863 590 aa3.6□□□□□ -1.83
NUP60YAR002W MRS2Q01926 470 aa3.6□□□□□ -1.83
NUP60YAR002W RNT1Q02555 471 aa3.6□□□□□ -1.83
NUP60YAR002W COQ9Q05779 260 aa3.6□□□□□ -1.83
NUP60YAR002W OMS1Q06668 471 aa3.6□□□□□ -1.83
NUP60YAR002W RSB1Q08417 382 aa3.6□□□□□ -1.83
NUP60YAR002W RUD3Q12234 484 aaKnown RBP3.6□□□□□ -1.83
NUP60YAR002W TRP3P00937 484 aa3.59□□□□□ -1.83
NUP60YAR002W RAD1P06777 1100 aa3.59□□□□□ -1.83
NUP60YAR002W DBP2P24783 546 aaKnown RBP3.59□□□□□ -1.83
NUP60YAR002W CDC11P32458 415 aa3.59□□□□□ -1.83
NUP60YAR002W EUG1P32474 517 aa3.59□□□□□ -1.83
NUP60YAR002W UBC6P33296 250 aaPredicted RBP3.59□□□□□ -1.83
NUP60YAR002W DBP7P36120 742 aaKnown RBP3.59□□□□□ -1.83
NUP60YAR002W LAS1P36146 502 aaPredicted RBP3.59□□□□□ -1.83
NUP60YAR002W HIS2P38635 335 aa3.59□□□□□ -1.83
NUP60YAR002W VPS41P38959 992 aa3.59□□□□□ -1.83
NUP60YAR002W SPC72P39723 622 aa3.59□□□□□ -1.83
NUP60YAR002W YEL025CP39991 1188 aa3.59□□□□□ -1.83
NUP60YAR002W NPP2P39997 493 aa3.59□□□□□ -1.83
NUP60YAR002W LCP5P40079 357 aaPredicted RBP3.59□□□□□ -1.83
NUP60YAR002W RAD26P40352 1085 aa3.59□□□□□ -1.83
NUP60YAR002W BRO1P48582 844 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms