RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ZHX3Q9H4I2 956 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 MAPK8IP1Q9UQF2 711 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 CMA1P23946 247 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 PAFAH1B1P43034 410 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 LINC00301Q8NCQ3 95 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 IPO4Q8TEX9 1081 aaKnown RBP11.98□□□□□ -0.49
USB1-212ENST00000566082 PCDHA5Q9Y5H7 936 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 ROBO2Q9HCK4 1378 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 MLH3Q9UHC1 1453 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 CTIFO43310 598 aaKnown RBP11.97□□□□□ -0.49
USB1-212ENST00000566082 MNAT1P51948 309 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 HNRNPH2P55795 449 aaKnown RBP11.97□□□□□ -0.49
USB1-212ENST00000566082 NBPF11Q86T75 865 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 EPC1Q9H2F5 836 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 RNF41Q9H4P4 317 aaPredicted RBP11.97□□□□□ -0.49
USB1-212ENST00000566082 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 MORC2Q9Y6X9 1032 aaPredicted RBP11.97□□□□□ -0.49
USB1-212ENST00000566082 MYOM1P52179 1685 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 CUTAO60888 179 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 USP6P35125 1406 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 POSTNQ15063 836 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 RNF187Q5TA31 235 aaPredicted RBP11.97□□□□□ -0.49
USB1-212ENST00000566082 CATIPQ7Z7H3 387 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 FUCA2Q9BTY2 467 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 GNL3LQ9NVN8 582 aaKnown RBP11.97□□□□□ -0.49
USB1-212ENST00000566082 CARMIL3Q8ND23 1372 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 A0A1W2PQ27 194 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 A0A1W2PQ64 194 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 A0A1W2PQD8 194 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 APPBP2Q92624 585 aa11.97□□□□□ -0.49
USB1-212ENST00000566082 ZCCHC17Q9NP64 241 aaKnown RBP11.97□□□□□ -0.49
USB1-212ENST00000566082 USO1O60763 962 aaKnown RBP11.96□□□□□ -0.49
USB1-212ENST00000566082 UBA7P41226 1012 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 SLC4A8Q2Y0W8 1093 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 TTC31Q49AM3 519 aaPredicted RBP11.96□□□□□ -0.49
USB1-212ENST00000566082 TDRD12Q587J7 1177 aaKnown RBP11.96□□□□□ -0.49
USB1-212ENST00000566082 FKBP15Q5T1M5 1219 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 CNGA4Q8IV77 575 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 MLKLQ8NB16 471 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 FAM89AQ96GI7 184 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 CHGBP05060 677 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 ZAP70P43403 619 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 GYS2P54840 703 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 UBXN1Q04323 297 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 XAGE2Q96GT9 111 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 SERTAD1Q9UHV2 236 aa11.96□□□□□ -0.49
USB1-212ENST00000566082 STARD3NLO95772 234 aa11.96□□□□□ -0.5
USB1-212ENST00000566082 FGAP02671 866 aa11.96□□□□□ -0.5
USB1-212ENST00000566082 SPAG1Q07617 926 aa11.96□□□□□ -0.5
USB1-212ENST00000566082 IQCB1Q15051 598 aa11.96□□□□□ -0.5
USB1-212ENST00000566082 CACNA2D4Q7Z3S7 1137 aa11.96□□□□□ -0.5
USB1-212ENST00000566082 NAPGQ99747 312 aaPredicted RBP11.96□□□□□ -0.5
USB1-212ENST00000566082 LUC7LQ9NQ29 371 aaKnown RBP11.96□□□□□ -0.5
USB1-212ENST00000566082 COPRSQ9NQ92 184 aa11.96□□□□□ -0.5
USB1-212ENST00000566082 SLC4A4Q9Y6R1 1079 aa11.96□□□□□ -0.5
USB1-212ENST00000566082 KIAA1210Q9ULL0 1709 aa11.96□□□□□ -0.5
USB1-212ENST00000566082 VWA3AA6NCI4 1184 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 CABLES1Q8TDN4 633 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 CRB1P82279 1406 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 PPRC1Q5VV67 1664 aaKnown RBP11.95□□□□□ -0.5
USB1-212ENST00000566082 AKR1B10O60218 316 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 SLC5A1P13866 664 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 CCDC96Q2M329 555 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 MIGA1Q8NAN2 632 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 SIRT1Q96EB6 747 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 AIFM3Q96NN9 605 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 SLF1Q9BQI6 1058 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 KRT23Q9C075 422 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 ADGRB1O14514 1584 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 NEO1Q92859 1461 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 CCDC194A0A1B0GVG4 234 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 LRRC24Q50LG9 513 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 RILPL1Q5EBL4 403 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
USB1-212ENST00000566082 COL3A1P02461 1466 aaPredicted RBP11.95□□□□□ -0.5
USB1-212ENST00000566082 A1BGP04217 495 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 IGHMBP2P38935 993 aaKnown RBP11.94□□□□□ -0.5
USB1-212ENST00000566082 EPHA10Q5JZY3 1008 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 CMTR1Q8N1G2 835 aaKnown RBP11.94□□□□□ -0.5
USB1-212ENST00000566082 PLBD2Q8NHP8 589 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 PDE11AQ9HCR9 933 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 KRT18P05783 430 aaKnown RBP11.94□□□□□ -0.5
USB1-212ENST00000566082 KRT9P35527 623 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 CYLC1P35663 651 aaPredicted RBP11.94□□□□□ -0.5
USB1-212ENST00000566082 HLTFQ14527 1009 aaKnown RBP eCLIP11.94□□□□□ -0.5
USB1-212ENST00000566082 ZNF174Q15697 407 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 BCCIPQ9P287 314 aaKnown RBP eCLIP11.94□□□□□ -0.5
USB1-212ENST00000566082 CTNND2Q9UQB3 1225 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 TBX22Q9Y458 520 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 SALL3Q9BXA9 1300 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 SYNRGQ9UMZ2 1314 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 CKAP4Q07065 602 aaKnown RBP11.94□□□□□ -0.5
USB1-212ENST00000566082 PLIN2Q99541 437 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 LUC7L2Q9Y383 392 aaKnown RBP11.94□□□□□ -0.5
USB1-212ENST00000566082 PTPRMP28827 1452 aa11.94□□□□□ -0.5
USB1-212ENST00000566082 BTBD18B2RXH4 712 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms