RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Olfr118Q7TRJ6 321 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Strip1Q8C079 837 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Chd5A2A8L1 1946 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Myh6Q02566 1938 aaKnown RBP17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 1700113H08RikE9Q9Q5 327 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Mcm3P25206 812 aaKnown RBP17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Vars2Q3U2A8 1060 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Spata5Q3UMC0 893 aaKnown RBP17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Slfn1Q9Z0I7 337 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Col4a5Q63ZW6 1691 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Mtx1P47802 317 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Gtf3c3Q3TMP1 882 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Ranbp6Q8BIV3 1105 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 9230110C19RikQ8CC70 267 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Efcc1Q9JJF6 558 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Cdc45Q9Z1X9 566 aa17.41■□□□□ 0.38
Trim11-203ENSMUST00000108810 Wdr33Q8K4P0 1330 aaKnown RBP17.4■□□□□ 0.38
Trim11-203ENSMUST00000108810 Cfap69Q8BH53 942 aa17.4■□□□□ 0.38
Trim11-203ENSMUST00000108810 Ttc12Q8BW49 704 aa17.4■□□□□ 0.38
Trim11-203ENSMUST00000108810 CpzQ8R4V4 654 aa17.4■□□□□ 0.38
Trim11-203ENSMUST00000108810 Togaram1Q6A070 1776 aaKnown RBP17.4■□□□□ 0.38
Trim11-203ENSMUST00000108810 Cfap99A0A140LIX9 648 aa17.39■□□□□ 0.38
Trim11-203ENSMUST00000108810 Ccng2O08918 344 aa17.39■□□□□ 0.38
Trim11-203ENSMUST00000108810 Me1P06801 572 aa17.39■□□□□ 0.38
Trim11-203ENSMUST00000108810 Bend4P86174 541 aa17.39■□□□□ 0.38
Trim11-203ENSMUST00000108810 Tmem109Q3UBX0 243 aa17.39■□□□□ 0.38
Trim11-203ENSMUST00000108810 Kcnn1Q9EQR3 537 aa17.39■□□□□ 0.38
Trim11-203ENSMUST00000108810 Rcan3Q9JKK0 239 aa17.39■□□□□ 0.38
Trim11-203ENSMUST00000108810 Suclg2Q9Z2I8 433 aa17.39■□□□□ 0.38
Trim11-203ENSMUST00000108810 Rnf41Q8BH75 317 aa17.39■□□□□ 0.37
Trim11-203ENSMUST00000108810 Rbm5Q91YE7 815 aaKnown RBP17.39■□□□□ 0.37
Trim11-203ENSMUST00000108810 Chd1lQ9CXF7 900 aa17.39■□□□□ 0.37
Trim11-203ENSMUST00000108810 Prss40A6H6T1 365 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Zscan25B2RX31 543 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Fam184aE9PW83 1143 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Psd3Q2PFD7 1037 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Ccdc51Q3URS9 406 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Tex2Q6ZPJ0 1128 aaKnown RBP17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Terb1Q8C0V1 768 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Ccdc47Q9D024 483 aaKnown RBP17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Cnpy3Q9DAU1 276 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Znf638Q61464 1960 aaKnown RBP17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Ccdc112A0AUP1 442 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Tnni2P13412 182 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Foxp1P58462 705 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Sec23aQ01405 765 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Esyt2Q3TZZ7 845 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 SfswapQ3USH5 945 aaKnown RBP17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Cdkl5Q3UTQ8 938 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Kiaa0319Q5SZV5 1081 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Pim2Q62070 370 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Otop3Q80UF9 577 aa17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 Add3Q9QYB5 706 aaKnown RBP17.38■□□□□ 0.37
Trim11-203ENSMUST00000108810 PcQ05920 1178 aa17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 NsmfQ99NF2 532 aa17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 Col4a3bpQ9EQG9 624 aa17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 Nup188Q6ZQH8 1759 aa17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 MeiocA2AG06 965 aa17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 Ctr9Q62018 1173 aaKnown RBP17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 Slitrk3Q810B9 980 aa17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 Prkag3Q8BGM7 489 aa17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 Sugp2Q8CH09 1067 aa17.37■□□□□ 0.37
Trim11-203ENSMUST00000108810 1810065E05RikQ5NC41 235 aa17.36■□□□□ 0.37
Trim11-203ENSMUST00000108810 Bicd2Q921C5 820 aa17.36■□□□□ 0.37
Trim11-203ENSMUST00000108810 WtapQ9ER69 396 aa17.36■□□□□ 0.37
Trim11-203ENSMUST00000108810 Cfap73J3QPZ5 306 aa17.36■□□□□ 0.37
Trim11-203ENSMUST00000108810 Fchsd1Q6PFY1 688 aa17.36■□□□□ 0.37
Trim11-203ENSMUST00000108810 CerkQ8K4Q7 531 aa17.36■□□□□ 0.37
Trim11-203ENSMUST00000108810 Pet2A2AHY8 747 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Gas1Q01721 343 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Ell2Q3UKU1 639 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Cdcp1Q5U462 833 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Lrrc2Q8VDB8 371 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 St5Q924W7 1134 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Epb41l3Q9WV92 929 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Kansl3A2RSY1 903 aaKnown RBP17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Atp6v0a2P15920 856 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Cplx2P84086 134 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 RarsQ9D0I9 660 aaKnown RBP17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Trim44Q9QXA7 346 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Clic4Q9QYB1 253 aa17.35■□□□□ 0.37
Trim11-203ENSMUST00000108810 Ambra1A2AH22 1300 aa17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 Klhl34A2AI76 644 aa17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 Cfap58B2RW38 873 aa17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 Dnajc2P54103 621 aaKnown RBP17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 Spg7Q3ULF4 781 aa17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 Fam198bQ3UPI1 517 aa17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 Glis3Q6XP49 780 aa17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 UvssaQ9D479 717 aa17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 Mrpl12Q9DB15 201 aaKnown RBP17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 TnmdQ9EP64 317 aa17.34■□□□□ 0.37
Trim11-203ENSMUST00000108810 Tcof1O08784 1320 aaKnown RBP17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Pramel3A2AHA7 463 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Gm7903A2AWL1 463 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 AV320801A2AWL3 467 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Gm15023L7MUB4 467 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Ehmt1Q5DW34 1296 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Pcsk7Q61139 770 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Snx13Q6PHS6 957 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Adck5Q80V03 582 aa17.33■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms