RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 OBSCN-AS1Q96MR7 158 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 ENY2Q9NPA8 101 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 ZFP30Q9Y2G7 519 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 ARL2BPQ9Y2Y0 163 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 U3KQ87 197 aa1.06□□□□□ -2.24
CLK1-213ENST00000492793 HEATR1Q9H583 2144 aaKnown RBP1.06□□□□□ -2.24
CLK1-213ENST00000492793 TRAV12-1A0A0B4J245 112 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 CCDC160A6NGH7 325 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 OR7C1O76099 320 aaPredicted RBP1.05□□□□□ -2.24
CLK1-213ENST00000492793 HAND1O96004 215 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 CTXN2P0C2S0 81 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 SERPINB9P50453 376 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 CTAG1AP78358 180 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 REEP5Q00765 189 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 ESRGQ1W209 222 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 DEFB113Q30KQ7 82 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 GNPDA2Q8TDQ7 276 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 DGCR14Q96DF8 476 aaKnown RBP1.05□□□□□ -2.24
CLK1-213ENST00000492793 RASL12Q9NYN1 266 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 HS3ST2Q9Y278 367 aa1.05□□□□□ -2.24
CLK1-213ENST00000492793 TMEM210A6NLX4 147 aa1.04□□□□□ -2.24
CLK1-213ENST00000492793 CST8O60676 142 aa1.04□□□□□ -2.24
CLK1-213ENST00000492793 SRIP30626 198 aa1.04□□□□□ -2.24
CLK1-213ENST00000492793 ERVS71-1P61550 626 aa1.04□□□□□ -2.24
CLK1-213ENST00000492793 KRR1Q13601 381 aaKnown RBP1.04□□□□□ -2.24
CLK1-213ENST00000492793 C12orf45Q8N5I9 185 aaPredicted RBP1.04□□□□□ -2.24
CLK1-213ENST00000492793 SLC30A7Q8NEW0 376 aa1.04□□□□□ -2.24
CLK1-213ENST00000492793 TEX47Q8TBZ9 253 aa1.04□□□□□ -2.24
CLK1-213ENST00000492793 ZNF418Q8TF45 676 aaPredicted RBP1.04□□□□□ -2.24
CLK1-213ENST00000492793 SLAMF6Q96DU3 332 aa1.04□□□□□ -2.24
CLK1-213ENST00000492793 BCL2L10Q9HD36 194 aa1.04□□□□□ -2.24
CLK1-213ENST00000492793 CHD3Q12873 2000 aaKnown RBP1.03□□□□□ -2.24
CLK1-213ENST00000492793 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.03□□□□□ -2.24
CLK1-213ENST00000492793 C19orf84I3L1E1 186 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 HMGB3O15347 200 aaKnown RBP1.03□□□□□ -2.24
CLK1-213ENST00000492793 GADD45GO95257 159 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 SERPINA1P01009 418 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 HOXA6P31267 233 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 PIGPP57054 158 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 AKIRIN2Q53H80 203 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 C3orf56Q8N813 242 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 ADAT3Q96EY9 351 aaPredicted RBP1.03□□□□□ -2.24
CLK1-213ENST00000492793 PHB2Q99623 299 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 PRADC1Q9BSG0 188 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 TLNRD1Q9H1K6 362 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 CDC42SE1Q9NRR8 79 aa1.03□□□□□ -2.24
CLK1-213ENST00000492793 CASP8AP2Q9UKL3 1982 aa1.03□□□□□ -2.25
CLK1-213ENST00000492793 LOC110117498A0A087WWA1 95 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 ATP5HO75947 161 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 IFNA6P05013 189 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 DYNLT1P63172 113 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 MRPS25P82663 173 aaKnown RBP1.02□□□□□ -2.25
CLK1-213ENST00000492793 MRPS15P82914 257 aaKnown RBP1.02□□□□□ -2.25
CLK1-213ENST00000492793 C1orf137Q5JT78 98 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 OR2T35Q8NGX2 323 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 C4orf3Q8WVX3 66 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 C9orf16Q9BUW7 83 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 C14orf132Q9NPU4 83 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 OPTCQ9UBM4 332 aa1.02□□□□□ -2.25
CLK1-213ENST00000492793 RIMBP3CA6NJZ7 1639 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 RIMBP3BA6NNM3 1639 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 RIMBP3Q9UFD9 1639 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 ZNF736B4DX44 427 aaPredicted RBP1.01□□□□□ -2.25
CLK1-213ENST00000492793 TIMM17BO60830 172 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 DNAL4O96015 105 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 CNBPP62633 177 aaKnown RBP1.01□□□□□ -2.25
CLK1-213ENST00000492793 FAM74A1Q5RGS3 127 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 BCL2L15Q5TBC7 163 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 GDF5OSQ5U4N7 250 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 OR11H6Q8NGC7 330 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 TMEM254Q8TBM7 123 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 STAG3L4Q8TBR4 150 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 BORCS5Q969J3 196 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 LINC00526Q96FQ7 95 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 CHMP6Q96FZ7 201 aa1.01□□□□□ -2.25
CLK1-213ENST00000492793 TRGV10A0A0A0MS01 117 aa1□□□□□ -2.25
CLK1-213ENST00000492793 ZNF25P17030 456 aaPredicted RBP1□□□□□ -2.25
CLK1-213ENST00000492793 HSD11B1P28845 292 aa1□□□□□ -2.25
CLK1-213ENST00000492793 CAPZBP47756 277 aa1□□□□□ -2.25
CLK1-213ENST00000492793 TMED2Q15363 201 aa1□□□□□ -2.25
CLK1-213ENST00000492793 SOSTDC1Q6X4U4 206 aa1□□□□□ -2.25
CLK1-213ENST00000492793 S100A7AQ86SG5 101 aa1□□□□□ -2.25
CLK1-213ENST00000492793 CEP19Q96LK0 163 aa1□□□□□ -2.25
CLK1-213ENST00000492793 MCM3APO60318 1980 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 ARHGEF28Q8N1W1 1705 aaKnown RBP0.99□□□□□ -2.25
CLK1-213ENST00000492793 TRAV4A0A0B4J268 109 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 FAM159BA6NKW6 160 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 NDUFB3O43676 98 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 IFNA7P01567 189 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 ATP5G3P48201 142 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 TAF1AQ15573 450 aaPredicted RBP0.99□□□□□ -2.25
CLK1-213ENST00000492793 MPV17LQ2QL34 196 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 GOLT1AQ6ZVE7 132 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 PDZD9Q8IXQ8 264 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 ST6GALNAC3Q8NDV1 305 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 OR10X1Q8NGY0 326 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 YPEL2Q96QA6 119 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 DOCK4Q8N1I0 1966 aa0.99□□□□□ -2.25
CLK1-213ENST00000492793 FMN1Q68DA7 1419 aa0.98□□□□□ -2.25
CLK1-213ENST00000492793 LAMB4A4D0S4 1761 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms