RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 RALYQ9UKM9 306 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-208ENST00000548436 TRBV23-1A0A0A0MS06 115 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 IGHV3-72A0A0B4J1Y9 119 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 A0A1W2PN81 502 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 SLC25A17O43808 307 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 MT-CO2P00403 227 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 PDZD11Q5EBL8 140 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 OR2T10Q8NGZ9 312 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 CACNG8Q8WXS5 425 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 ZNF503Q96F45 646 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 GPR61Q9BZJ8 451 aa14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 GAR1Q9NY12 217 aaKnown RBP14.96□□□□□ -0.02
PRPF40B-208ENST00000548436 DCHS2Q6V1P9 2916 aa14.95□□□□□ -0.02
PRPF40B-208ENST00000548436 PPP5D1E7EU14 171 aa14.95□□□□□ -0.02
PRPF40B-208ENST00000548436 PPP1R2P9O14990 202 aa14.95□□□□□ -0.02
PRPF40B-208ENST00000548436 CD99P14209 185 aa14.95□□□□□ -0.02
PRPF40B-208ENST00000548436 PPOXP50336 477 aa14.95□□□□□ -0.02
PRPF40B-208ENST00000548436 FAM3BP58499 235 aaPredicted RBP14.95□□□□□ -0.02
PRPF40B-208ENST00000548436 S100A12P80511 92 aa14.95□□□□□ -0.02
PRPF40B-208ENST00000548436 SPTA1P02549 2419 aa14.95□□□□□ -0.02
PRPF40B-208ENST00000548436 MC5RP33032 325 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 GPX4P36969 197 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 SSBP2P81877 361 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 PSG5Q15238 335 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 HLA-DRB5Q30154 266 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 OCC1Q8TAD7 63 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 ACY3Q96HD9 319 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 FNDC4Q9H6D8 234 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 NCOR2Q9Y618 2525 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 ABCA4P78363 2273 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 ELOA3CA0A087WX78 387 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 IGHV2-26A0A0B4J1V2 119 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 ENSAO43768 121 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 OR5G3P0C626 314 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 HNF1AP20823 631 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 TMEM37Q8WXS4 190 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 SFRP2Q96HF1 295 aa14.94□□□□□ -0.02
PRPF40B-208ENST00000548436 ANKHD1Q8IWZ3 2542 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 IGHV2-70P01814 119 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 VMA21Q3ZAQ7 101 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 ZNF672Q499Z4 452 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 PNKDQ8N490 385 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 ST6GALNAC3Q8NDV1 305 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 C11orf52Q96A22 123 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 TECRQ9NZ01 308 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 A0A1W2PPI3 338 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 IGLV1-47P01700 117 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 IL3RAP26951 378 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 S100A2P29034 98 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 UCNP55089 124 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 ADORA2A-AS1P86434 159 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 KCNIP4Q6PIL6 250 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 GSN-AS1Q9NRJ2 163 aa14.93□□□□□ -0.02
PRPF40B-208ENST00000548436 PSMB11A5LHX3 300 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 IGHV3-48P01763 117 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 TYMSP04818 313 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 REG1AP05451 166 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 AREGP15514 252 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 KLRB1Q12918 225 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 PYY3Q5JQD4 70 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 RNASEH2CQ8TDP1 164 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 C19orf24Q9BVV8 132 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 TMEM167BQ9NRX6 74 aa14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 TPRP12270 2363 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-208ENST00000548436 MDFIC2A0A1B0GVS7 189 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 ZZEF1O43149 2961 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 OR7C2O60412 319 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 CNTFRP26992 372 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 LGALS7P47929 136 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 MORN5Q5VZ52 161 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 OR10D4PQ8NGN7 298 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 TNFRSF14Q92956 283 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 UHRF2Q96PU4 802 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 K7EN84 100 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 PQLC2Q6ZP29 291 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 SLC25A33Q9BSK2 321 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 MRPL36Q9P0J6 103 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 PITPNC1Q9UKF7 332 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 ARL2-SNX15V9GYD0 113 aa14.91□□□□□ -0.02
PRPF40B-208ENST00000548436 FABP1P07148 127 aa14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 OR10J4P0C629 311 aa14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 SUB1P53999 127 aaKnown RBP eCLIP14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 ACTL10Q5JWF8 245 aa14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 TEX38Q6PEX7 206 aa14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 NPIPB3Q92617 1050 aa14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 IMMP2LQ96T52 175 aa14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 MIOXQ9UGB7 285 aa14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 NBASA2RRP1 2371 aa14.9□□□□□ -0.02
PRPF40B-208ENST00000548436 TACC2O95359 2948 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 IGKV1D-37A0A075B6S9 117 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 FSTL3O95633 263 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 PRRX1P54821 245 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 LCN2P80188 198 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 FOXL1Q12952 345 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 OR51M1Q9H341 326 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 ARHGAP32A7KAX9 2087 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 ATRXP46100 2492 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 TRAV5A0A0B4J249 113 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 PPIAL4CA0A0B4J2A2 164 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 IGLC7A0M8Q6 106 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms