RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SGMS2Q8NHU3 365 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 TMEM186Q96B77 213 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 HARBI1Q96MB7 349 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 IL36BQ9NZH7 164 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 SVILO95425 2214 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 IGKV1OR2-108A0A075B7D4 117 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 A0A0U1RQK1 487 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 ZNF320A2RRD8 509 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 FCN3O75636 299 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 OR10J4P0C629 311 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 TAS2R45P59539 299 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 BSPH1Q075Z2 132 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 WFDC8Q8IUA0 241 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 SAP30LQ9HAJ7 183 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 KAAG1Q9UBP8 84 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 TMEM200BQ69YZ2 307 aa20.34■□□□□ 0.85
ROM1-201ENST00000278833 EAF1Q96JC9 268 aaPredicted RBP20.34■□□□□ 0.85
ROM1-201ENST00000278833 PGPEP1LA6NFU8 196 aa20.33■□□□□ 0.85
ROM1-201ENST00000278833 VSTM5A8MXK1 200 aa20.33■□□□□ 0.85
ROM1-201ENST00000278833 FOXH1O75593 365 aa20.33■□□□□ 0.85
ROM1-201ENST00000278833 RPL8P62917 257 aaKnown RBP20.33■□□□□ 0.85
ROM1-201ENST00000278833 CLEC12BQ2HXU8 276 aa20.33■□□□□ 0.85
ROM1-201ENST00000278833 ST6GALNAC6Q969X2 333 aa20.33■□□□□ 0.85
ROM1-201ENST00000278833 TMEM18Q96B42 140 aa20.33■□□□□ 0.85
ROM1-201ENST00000278833 TRAPPC1Q9Y5R8 145 aa20.33■□□□□ 0.85
ROM1-201ENST00000278833 ZNF843Q8N446 348 aa20.33■□□□□ 0.84
ROM1-201ENST00000278833 OR4C13Q8NGP0 309 aa20.33■□□□□ 0.84
ROM1-201ENST00000278833 TMEM37Q8WXS4 190 aa20.33■□□□□ 0.84
ROM1-201ENST00000278833 ZNF503Q96F45 646 aa20.33■□□□□ 0.84
ROM1-201ENST00000278833 NBASA2RRP1 2371 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 A0A1W2PRE2 83 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 PSMB11A5LHX3 300 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 K7EN84 100 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 OR10J1P30954 320 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 DLX6P56179 175 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 ERHP84090 104 aaKnown RBP20.32■□□□□ 0.84
ROM1-201ENST00000278833 COMMD5Q9GZQ3 224 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 TMEM106BQ9NUM4 274 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 ZNRD1Q9P1U0 126 aa20.32■□□□□ 0.84
ROM1-201ENST00000278833 RP1L1Q8IWN7 2480 aaPredicted RBP20.31■□□□□ 0.84
ROM1-201ENST00000278833 GZMBP10144 247 aa20.31■□□□□ 0.84
ROM1-201ENST00000278833 PRR30Q53SZ7 412 aaPredicted RBP20.31■□□□□ 0.84
ROM1-201ENST00000278833 GBGT1Q8N5D6 347 aa20.31■□□□□ 0.84
ROM1-201ENST00000278833 FLYWCH2Q96CP2 140 aaKnown RBP20.31■□□□□ 0.84
ROM1-201ENST00000278833 AURKAIP1Q9NWT8 199 aaPredicted RBP20.31■□□□□ 0.84
ROM1-201ENST00000278833 NDUFB3O43676 98 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 CCL3L1P16619 93 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 SELENOTP62341 195 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 HLA-DRB5Q30154 266 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 LRRC10Q5BKY1 277 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 RND1Q92730 232 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 TRBV23-1A0A0A0MS06 115 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 TSTD3H0UI37 97 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 PSG5Q15238 335 aa20.3■□□□□ 0.84
ROM1-201ENST00000278833 PLCE1Q9P212 2302 aa20.29■□□□□ 0.84
ROM1-201ENST00000278833 C8orf88P0DMB2 117 aa20.29■□□□□ 0.84
ROM1-201ENST00000278833 WASHC3Q9Y3C0 194 aa20.29■□□□□ 0.84
ROM1-201ENST00000278833 C9orf152Q5JTZ5 239 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 MOB3BQ86TA1 216 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 SLC25A33Q9BSK2 321 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 NGBQ9NPG2 151 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 RELNP78509 3460 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 TRBV9A0A0B4J1U6 114 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 IGLV2-23P01705 113 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 LOXP28300 417 aaPredicted RBP20.28■□□□□ 0.84
ROM1-201ENST00000278833 LGALS4P56470 323 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 TMEM155Q4W5P6 130 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 RNASE6Q93091 150 aaKnown RBP20.28■□□□□ 0.84
ROM1-201ENST00000278833 YLPM1P49750 1951 aaKnown RBP20.28■□□□□ 0.84
ROM1-201ENST00000278833 ZNF462Q96JM2 2506 aa20.28■□□□□ 0.84
ROM1-201ENST00000278833 CHRNB4P30926 498 aa20.27■□□□□ 0.84
ROM1-201ENST00000278833 PVRIGQ6DKI7 326 aa20.27■□□□□ 0.84
ROM1-201ENST00000278833 GFRALQ6UXV0 394 aa20.27■□□□□ 0.84
ROM1-201ENST00000278833 THAP8Q8NA92 274 aa20.27■□□□□ 0.84
ROM1-201ENST00000278833 ACTL6BO94805 426 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 MC5RP33032 325 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 DEFA6Q01524 100 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 OR10W1Q8NGF6 305 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 OR10X1Q8NGY0 326 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 OR9G1Q8NH87 305 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 OSTCQ9NRP0 149 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 CTSZQ9UBR2 303 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 V9GYV3 84 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 CGB1A6NKQ9 187 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 FAM167A-AS1Q96KT0 104 aa20.26■□□□□ 0.83
ROM1-201ENST00000278833 HELTA6NFD8 242 aa20.25■□□□□ 0.83
ROM1-201ENST00000278833 ESDP10768 282 aa20.25■□□□□ 0.83
ROM1-201ENST00000278833 GNG4P50150 75 aa20.25■□□□□ 0.83
ROM1-201ENST00000278833 SUB1P53999 127 aaKnown RBP eCLIP20.25■□□□□ 0.83
ROM1-201ENST00000278833 CENPWQ5EE01 88 aa20.25■□□□□ 0.83
ROM1-201ENST00000278833 TNFRSF14Q92956 283 aa20.25■□□□□ 0.83
ROM1-201ENST00000278833 SHISA9B4DS77 424 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 ZNF90Q03938 601 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 RPEL1Q2QD12 228 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 COX19Q49B96 90 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 ZNF430Q9H8G1 570 aaPredicted RBP20.24■□□□□ 0.83
ROM1-201ENST00000278833 GGTLC3B5MD39 225 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 FSTL3O95633 263 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 DDTP30046 118 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 PAX2Q02962 417 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms