RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 SgcaP82350 387 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Nkpd1Q0VF94 599 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Samt2Q497M0 247 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Trav6d-4Q5R1I0 115 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Q8C4X7 151 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Bbc3Q99ML1 193 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Sval1Q9D2X6 151 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 HpgdsQ9JHF7 199 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Dctn5Q9QZB9 182 aa21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Ncor2Q9WU42 2472 aaKnown RBP21.48■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Olfr1289A0A288CFY5 326 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Gm14692A2BH01 229 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Olfr773F6VS78 311 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Col8a2P25318 699 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Rpl12P35979 165 aaKnown RBP21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 TaglnP37804 201 aaKnown RBP21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Nkx3-1P97436 237 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 St8sia3Q64689 380 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Zc4h2Q68FG0 224 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Zfp429Q7M6Y0 485 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Lrtm2Q8BGX3 370 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Olfr772Q8VGC5 311 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Znrf1Q91V17 227 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Fbxo36Q9CQ24 188 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Cyb5bQ9CQX2 146 aaKnown RBP21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Ly96Q9JHF9 160 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Slc25a10Q9QZD8 287 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Sumo3Q9Z172 110 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Fxyd1Q9Z239 92 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Dnajc13D4AFX7 2248 aaKnown RBP21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Gm10112D3YWP5 117 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Siva1O54926 175 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Iglc3P01845 104 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Ear1P97426 155 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 StumQ0VBF8 141 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 HykkQ5U5V2 376 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Mrpl28Q9D1B9 257 aa21.47■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Dmxl2Q8BPN8 3032 aa21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Tcrg-C4A0A075B6C7 190 aa21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Lnp1A0A1B0GSK3 178 aa21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Lin7cO88952 197 aaKnown RBP21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Tmem40Q4FJU9 225 aa21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Thoc7Q7TMY4 204 aaKnown RBP21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Mmp28Q8CGV8 520 aa21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 SbsnQ8CIT9 700 aa21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Prr15Q9D1T5 122 aa21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Ndufa11Q9D8B4 141 aa21.46■■□□□ 1.03
Tpm1-216ENSMUST00000113707 Gm2026A2ART4 498 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 RnlsA7RDN6 342 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Rdh16O54909 317 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Ppp1ccP63087 323 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Fn3krpQ8K274 309 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Vmn1r59Q8R2B9 310 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Ndufb7Q9CR61 137 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Nol3Q9D1X0 220 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Zfand6Q9DCH6 223 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Akap9Q70FJ1 3797 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Cryba1P02525 198 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Hoxa6P09092 232 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 P18525 117 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 VhlP40338 181 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Ccl11P48298 97 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Herpud1Q9JJK5 391 aa21.45■■□□□ 1.02
Tpm1-216ENSMUST00000113707 KantrA0A1W2P7I0 76 aa21.44■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Olfr248E9Q1L6 309 aa21.44■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Mcpt8P43430 247 aa21.44■■□□□ 1.02
Tpm1-216ENSMUST00000113707 PkiaP63248 76 aa21.44■■□□□ 1.02
Tpm1-216ENSMUST00000113707 NotoQ5TIS6 240 aa21.44■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Prss35Q8C0F9 409 aa21.44■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Rbm48Q8K2X2 371 aa21.44■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Vmn1r180B9EK86 305 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Nkx2-1P50220 372 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Defb33Q30KN3 62 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Olfr875Q7TRE5 310 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Olfr358Q7TRY5 330 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Sdhaf2Q8C6I2 164 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Cd200r1Q9ES57 326 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Sec16aA2AIX1 2377 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Gm16368A0A1Y7VNG9 144 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Zcchc24B2RVL6 241 aaKnown RBP21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Mex3aG3UYU0 520 aaKnown RBP21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Olfr467L7N455 308 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 EndogO08600 294 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Ifna6P07350 189 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Pax2P32114 414 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Bex6Q3TZW7 114 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 MaoaQ64133 526 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Tacstd2Q8BGV3 317 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Lpar6Q8BMC0 344 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Stpg2Q8C8J0 561 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Olfr979Q8VH10 311 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Coa3Q9D2R6 108 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 PyyQ9EPS2 98 aa21.43■■□□□ 1.02
Tpm1-216ENSMUST00000113707 P2ry1P49650 373 aa21.42■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Npy4rQ61041 375 aa21.42■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Npy6rQ61212 371 aa21.42■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Olfr924Q7TRB8 308 aa21.42■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Clec4a1Q80UI7 245 aa21.42■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Inpp5kQ8C5L6 468 aa21.42■■□□□ 1.02
Tpm1-216ENSMUST00000113707 Ssxb2Q8C5Z3 165 aa21.42■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 72.8 ms