RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 ZNF716A6NP11 495 aa13.65□□□□□ -0.22
VSX2-201ENST00000261980 LMO7DNF2Z398 122 aa13.65□□□□□ -0.22
VSX2-201ENST00000261980 MT-ND6P03923 174 aa13.65□□□□□ -0.22
VSX2-201ENST00000261980 MRPL49Q13405 166 aaKnown RBP13.65□□□□□ -0.22
VSX2-201ENST00000261980 PNKDQ8N490 385 aa13.65□□□□□ -0.22
VSX2-201ENST00000261980 ZNF645Q8N7E2 425 aa13.65□□□□□ -0.22
VSX2-201ENST00000261980 OR1B1Q8NGR6 318 aa13.65□□□□□ -0.22
VSX2-201ENST00000261980 GALMQ96C23 342 aa13.65□□□□□ -0.22
VSX2-201ENST00000261980 PROK2Q9HC23 129 aa13.65□□□□□ -0.22
VSX2-201ENST00000261980 RP1L1Q8IWN7 2480 aaPredicted RBP13.64□□□□□ -0.23
VSX2-201ENST00000261980 C7orf71A4D174 169 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 C10orf142B7Z368 130 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 DSCR4P56555 118 aaPredicted RBP13.64□□□□□ -0.23
VSX2-201ENST00000261980 CLDN18P56856 261 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 EDDM3AQ14507 147 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 LPAL2Q16609 132 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 C16orf54Q6UWD8 224 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 SPSB4Q96A44 273 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 SIT1Q9Y3P8 196 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 CIDEAO60543 219 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 HBZP02008 142 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 RAC3P60763 192 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 CATR1Q13166 79 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 MLANAQ16655 118 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 ALKBH6Q3KRA9 238 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 SPEM1Q8N4L4 309 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 OR4A16Q8NH70 328 aa13.64□□□□□ -0.23
VSX2-201ENST00000261980 DYSFO75923 2080 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 GGTLC3B5MD39 225 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 MRPL33O75394 65 aaKnown RBP13.63□□□□□ -0.23
VSX2-201ENST00000261980 IGHV3-48P01763 117 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 CXCL12P48061 93 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 TM4SF20Q53R12 229 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 Q6P435 159 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 DEFB125Q8N687 156 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 TRBV9A0A0B4J1U6 114 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 KCNIP1Q9NZI2 227 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 ZNF391Q9UJN7 358 aa13.63□□□□□ -0.23
VSX2-201ENST00000261980 TRGV10A0A0A0MS01 117 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 A0A1W2PR77 199 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 H3BUT2 72 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 OPRK1P41145 380 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 GNG3P63215 75 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 SRSF7Q16629 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
VSX2-201ENST00000261980 ZNF497Q6ZNH5 498 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 FER1L6-AS1Q8NA97 138 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 C1orf159Q96HA4 380 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 HES4Q9HCC6 221 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 SAA2-SAA4A0A096LPE2 208 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 TRAV5A0A0B4J249 113 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 FABP6P51161 128 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 RAB1CQ92928 201 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 LEAP2Q969E1 77 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 GTSF1LQ9H1H1 148 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 KLK10O43240 276 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 RHOBP62745 196 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 RNF138Q8WVD3 245 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 PRDM14Q9GZV8 571 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 BOD1L1Q8NFC6 3051 aa13.62□□□□□ -0.23
VSX2-201ENST00000261980 LOC102723996A0A087X1L8 192 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 HSBP1L1C9JCN9 74 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 WDR86Q86TI4 376 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 SMIM12Q96EX1 92 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 LSM4Q9Y4Z0 139 aaKnown RBP13.61□□□□□ -0.23
VSX2-201ENST00000261980 PLAUP00749 431 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 RPL24P83731 157 aaKnown RBP13.61□□□□□ -0.23
VSX2-201ENST00000261980 SMAGPQ0VAQ4 97 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 TBR1Q16650 682 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 BHLHA15Q7RTS1 189 aaPredicted RBP13.61□□□□□ -0.23
VSX2-201ENST00000261980 TUSC5Q8IXB3 177 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 TEX45Q8NA69 505 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 SCCPDHQ8NBX0 429 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 NUP35Q8NFH5 326 aa13.61□□□□□ -0.23
VSX2-201ENST00000261980 HIGD1CA8MV81 97 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 CD46P15529 392 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 C3AR1Q16581 482 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 RPL39P5Q59GN2 51 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 Q6ZR03 302 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 SLC25A45Q8N413 288 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 WFDC12Q8WWY7 111 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 AP1S3Q96PC3 154 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 C12orf49Q9H741 205 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 PIGBOS1A0A0B4J2F0 54 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 MT-CO3P00414 261 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 P0C879 139 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 FAM214BQ7L5A3 538 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 URB1-AS1Q96HZ7 61 aa13.6□□□□□ -0.23
VSX2-201ENST00000261980 TRAV9-1A0A075B6T8 112 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 LEPROTL1O95214 131 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 SMIM21Q3B7S5 101 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 MORN5Q5VZ52 161 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 GGNQ86UU5 652 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 GJE1A6NN92 205 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 C9JCJ5 164 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 K7ESF4 209 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 P04436 131 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 ARR3P36575 388 aa13.59□□□□□ -0.23
VSX2-201ENST00000261980 SNRNP40Q96DI7 357 aaKnown RBP13.59□□□□□ -0.23
VSX2-201ENST00000261980 POM121L2Q96KW2 1035 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms